RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 AMDHD1Q96NU7 426 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 TSSK3Q96PN8 268 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 LENG8Q96PV6 779 aaPredicted RBP4.17□□□□□ -1.74
VPS13C-202ENST00000261517 CARS2Q9HA77 564 aaKnown RBP4.17□□□□□ -1.74
VPS13C-202ENST00000261517 ERVK-11Q9UQG0 969 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 SLC35A3Q9Y2D2 325 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 A0A0G2JPF8 293 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 LOC100506127A0A0U1RQW1 187 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 HNRNPCL3B7ZW38 293 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 FESP07332 822 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 HNRNPCL4P0DMR1 293 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 LMO2P25791 158 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 NTSR1P30989 418 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 PRPS1P60891 318 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 MERTKQ12866 999 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 SLC39A5Q6ZMH5 540 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 GOLGA7Q7Z5G4 137 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 MS4A15Q8N5U1 240 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 OR52E4Q8NGH9 312 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 ZNF384Q8TF68 577 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 ZBTB9Q96C00 473 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 KLHL5Q96PQ7 755 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 MED28Q9H204 178 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 NELFAQ9H3P2 528 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 SIAEQ9HAT2 523 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 SLC22A31A6NKX4 558 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 EFCAB7A8K855 629 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 EIF1AYO14602 144 aaKnown RBP4.17□□□□□ -1.74
VPS13C-202ENST00000261517 PDYNP01213 254 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 EIF1AXP47813 144 aaKnown RBP4.17□□□□□ -1.74
VPS13C-202ENST00000261517 ZNF678Q5SXM1 525 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 NCEH1Q6PIU2 408 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 ZNF773Q6PK81 442 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 ALYREFQ86V81 257 aaKnown RBP4.17□□□□□ -1.74
VPS13C-202ENST00000261517 ZNF781Q8N8C0 355 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 PPM1MQ96MI6 270 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 BIRC8Q96P09 236 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 PIP5K1AQ99755 562 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 SLC12A9Q9BXP2 914 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 DPEP3Q9H4B8 488 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 PFDN2Q9UHV9 154 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 SBF2Q86WG5 1849 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 PRAMEF26H0Y7S4 382 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 POP7O75817 140 aaKnown RBP4.17□□□□□ -1.74
VPS13C-202ENST00000261517 GDI1P31150 447 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 RAB28P51157 221 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 TOMM20Q15388 145 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 LRRC66Q68CR7 880 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 RNF44Q7L0R7 432 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 NLRP8Q86W28 1048 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 SLC34A3Q8N130 599 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 ZFAND2BQ8WV99 257 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 RBP7Q96R05 134 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 DOHHQ9BU89 302 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 OAS3Q9Y6K5 1087 aaKnown RBP4.17□□□□□ -1.74
VPS13C-202ENST00000261517 NPIPA5E9PKD4 350 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 OR4F21O95013 312 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 TGFBIQ15582 683 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 ZNF548Q8NEK5 533 aaPredicted RBP4.17□□□□□ -1.74
VPS13C-202ENST00000261517 RIOK2Q9BVS4 552 aaKnown RBP4.17□□□□□ -1.74
VPS13C-202ENST00000261517 ZCCHC3Q9NUD5 404 aaKnown RBP4.17□□□□□ -1.74
VPS13C-202ENST00000261517 CACFD1Q9UGQ2 172 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 NPIPA1Q9UND3 350 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 DBIP07108 87 aaKnown RBP4.16□□□□□ -1.74
VPS13C-202ENST00000261517 ANXA3P12429 323 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 TMEM115Q12893 351 aaPredicted RBP4.16□□□□□ -1.74
VPS13C-202ENST00000261517 CHRNA6Q15825 494 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 PLEKHG4Q58EX7 1191 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 SIDT2Q8NBJ9 832 aaKnown RBP4.16□□□□□ -1.74
VPS13C-202ENST00000261517 EXOSC8Q96B26 276 aaKnown RBP4.16□□□□□ -1.74
VPS13C-202ENST00000261517 CAPN10Q9HC96 672 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 OR6C74A6NCV1 312 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 WRBO00258 174 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 ABCB7O75027 752 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 CLEC3AO75596 197 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 RASAL1O95294 804 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 MYCLP1P12525 358 aaPredicted RBP4.16□□□□□ -1.74
VPS13C-202ENST00000261517 PGCP20142 388 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 QPCTQ16769 361 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 ARSIQ5FYB1 569 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 SLCO6A1Q86UG4 719 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 POC5Q8NA72 575 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 CCDC54Q8NEL0 328 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 TMEM80Q96HE8 168 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 LMLNQ96KR4 655 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 GPER1Q99527 375 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 SPATA2Q9UM82 520 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 RNASET2O00584 256 aaKnown RBP4.16□□□□□ -1.74
VPS13C-202ENST00000261517 TYROBPO43914 113 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 PRAMEF2O60811 474 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 CNTN5O94779 1100 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 ZNF865P0CJ78 1059 aaPredicted RBP4.16□□□□□ -1.74
VPS13C-202ENST00000261517 FGL1Q08830 312 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 CRB2Q5IJ48 1285 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 PAQR3Q6TCH7 311 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 USP30Q70CQ3 517 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 LRRC25Q8N386 305 aaPredicted RBP4.16□□□□□ -1.74
VPS13C-202ENST00000261517 NAT14Q8WUY8 206 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 WRAP53Q9BUR4 548 aaKnown RBP4.16□□□□□ -1.74
VPS13C-202ENST00000261517 TNFRSF10DQ9UBN6 386 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms