RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 CLIC3O95833 236 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 DDAH2O95865 285 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 CHRM4P08173 479 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 PCMT1P22061 227 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 SERPINB6P35237 376 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 FNTBP49356 437 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 CSNK1EP49674 416 aaKnown RBP5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 ANXA11P50995 505 aaKnown RBP5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 RHOAP61586 193 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 PPP2R2BQ00005 443 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 RPS6KA2Q15349 733 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 SLC5A12Q1EHB4 618 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 RIBC1Q8N443 379 aaPredicted RBP5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 AVL9Q8NBF6 648 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 ACTRT2Q8TDY3 377 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 ZFP90Q8TF47 636 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 DNASE1L2Q92874 299 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 KISS1RQ969F8 398 aaPredicted RBP5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 SERPINI1Q99574 410 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 RASSF4Q9H2L5 321 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 RAD18Q9NS91 495 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 DLL3Q9NYJ7 618 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 CROTQ9UKG9 612 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 PRMT5O14744 637 aaPredicted RBP5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 HGSO14964 777 aaPredicted RBP5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 PCSK2P16519 638 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 GPX2P18283 190 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 IL11P20809 199 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 ENDOUP21128 410 aaKnown RBP5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 INAVAQ3KP66 663 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 SDE2Q6IQ49 451 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 TIGD7Q6NT04 549 aaPredicted RBP5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 MORN4Q8NDC4 146 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 ZFPM2Q8WW38 1151 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 OTUB1Q96FW1 271 aaPredicted RBP5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 SELENOSQ9BQE4 189 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 C1orf50Q9BV19 199 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 C2orf49Q9BVC5 232 aaPredicted RBP5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 TRIM54Q9BYV2 358 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 YY1AP1Q9H869 796 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 DDX31Q9H8H2 851 aaKnown RBP5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 SCUBE2Q9NQ36 999 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 ZFATQ9P243 1243 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 KLHL42Q9P2K6 505 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 SEC14L4Q9UDX3 406 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 PCDHGA4Q9Y5G9 962 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 HMGN4O00479 90 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 CDC42EP2O14613 210 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 LRG1P02750 347 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 TFPTP0C1Z6 253 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 SPAM1P38567 509 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 GRIK2Q13002 908 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 THOC5Q13769 683 aaKnown RBP5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 MAPRE2Q15555 327 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 CRB2Q5IJ48 1285 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 ATG16L1Q676U5 607 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 OR8D4Q8NGM9 314 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 MTERF1Q99551 399 aaKnown RBP5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 MRPL57Q9BQC6 102 aaKnown RBP5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 FAM117AQ9C073 453 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 MVB12BQ9H7P6 319 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 CR1P17927 2039 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 A0A0G2JMM0 328 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 A0A1W2PPB8 328 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 A0A1W2PRS3 328 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 KIR3DP1A8MWS1 328 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 POP7O75817 140 aaKnown RBP5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 ATP5HO75947 161 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 LMNAP02545 664 aaKnown RBP5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 RALBP11234 206 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 BTG2P78543 158 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 KPNB1Q14974 876 aaKnown RBP5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 RUNDC3AQ59EK9 446 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 ARMC3Q5W041 872 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 ISLR2Q6UXK2 745 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 Q6ZSR6 202 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 BMP8AQ7Z5Y6 402 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 LRRTM4Q86VH4 590 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 DNAJB8Q8NHS0 232 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 PTPMT1Q8WUK0 201 aaPredicted RBP5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 GLMNQ92990 594 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 ADIPOR1Q96A54 375 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 ANKRD27Q96NW4 1050 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 EMILIN2Q9BXX0 1053 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 SLC13A4Q9UKG4 626 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 ZNF346Q9UL40 294 aaKnown RBP5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 DNAH8Q96JB1 4490 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 MYO1DO94832 1006 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 TFAP2AP05549 437 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 LTA4HP09960 611 aaKnown RBP5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 C1orf61Q13536 156 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 GTF2H3Q13889 308 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 SIM2Q14190 667 aaPredicted RBP5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 OR7G2Q8NG99 324 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 CLHC1Q8NHS4 586 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 RCN3Q96D15 328 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 SPSB2Q99619 263 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 MEPEQ9NQ76 525 aaPredicted RBP5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 THAP1Q9NVV9 213 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms