RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 ATXN8OSP0DMR3 200 aa15.94■□□□□ 0.14
SDCBP-201ENST00000260130 PIM1P11309 404 aaPredicted RBP15.94■□□□□ 0.14
SDCBP-201ENST00000260130 ITGAXP20702 1163 aa15.94■□□□□ 0.14
SDCBP-201ENST00000260130 RBBP5Q15291 538 aaKnown RBP15.94■□□□□ 0.14
SDCBP-201ENST00000260130 RCN1Q15293 331 aa15.94■□□□□ 0.14
SDCBP-201ENST00000260130 PCBP2Q15366 365 aaKnown RBP eCLIP15.94■□□□□ 0.14
SDCBP-201ENST00000260130 CRTC2Q53ET0 693 aaPredicted RBP15.94■□□□□ 0.14
SDCBP-201ENST00000260130 PRMT9Q6P2P2 845 aa15.94■□□□□ 0.14
SDCBP-201ENST00000260130 RINLQ6ZS11 566 aa15.94■□□□□ 0.14
SDCBP-201ENST00000260130 APLFQ8IW19 511 aaPredicted RBP15.94■□□□□ 0.14
SDCBP-201ENST00000260130 TMEM151AQ8N4L1 468 aa15.94■□□□□ 0.14
SDCBP-201ENST00000260130 MVB12AQ96EY5 273 aa15.94■□□□□ 0.14
SDCBP-201ENST00000260130 SLC22A11Q9NSA0 550 aa15.94■□□□□ 0.14
SDCBP-201ENST00000260130 TMEM216Q9P0N5 145 aa15.94■□□□□ 0.14
SDCBP-201ENST00000260130 DCDC2Q9UHG0 476 aa15.94■□□□□ 0.14
SDCBP-201ENST00000260130 LHX6Q9UPM6 363 aa15.94■□□□□ 0.14
SDCBP-201ENST00000260130 TNPO3Q9Y5L0 923 aaKnown RBP15.94■□□□□ 0.14
SDCBP-201ENST00000260130 MGAQ8IWI9 3026 aa15.94■□□□□ 0.14
SDCBP-201ENST00000260130 SMIM24O75264 130 aa15.93■□□□□ 0.14
SDCBP-201ENST00000260130 RECKO95980 971 aa15.93■□□□□ 0.14
SDCBP-201ENST00000260130 SLC35G6P0C7Q6 338 aa15.93■□□□□ 0.14
SDCBP-201ENST00000260130 EPORP19235 508 aa15.93■□□□□ 0.14
SDCBP-201ENST00000260130 AHRP35869 848 aa15.93■□□□□ 0.14
SDCBP-201ENST00000260130 OR1D4P47884 311 aa15.93■□□□□ 0.14
SDCBP-201ENST00000260130 RPS18P62269 152 aaKnown RBP15.93■□□□□ 0.14
SDCBP-201ENST00000260130 CYP4F2P78329 520 aa15.93■□□□□ 0.14
SDCBP-201ENST00000260130 NFKB2Q00653 900 aa15.93■□□□□ 0.14
SDCBP-201ENST00000260130 SLC9A5Q14940 896 aa15.93■□□□□ 0.14
SDCBP-201ENST00000260130 KPNB1Q14974 876 aaKnown RBP15.93■□□□□ 0.14
SDCBP-201ENST00000260130 NDUFA9Q16795 377 aa15.93■□□□□ 0.14
SDCBP-201ENST00000260130 XKR6Q5GH73 641 aa15.93■□□□□ 0.14
SDCBP-201ENST00000260130 DTWD1Q8N5C7 304 aa15.93■□□□□ 0.14
SDCBP-201ENST00000260130 METTL27Q8N6F8 245 aaPredicted RBP15.93■□□□□ 0.14
SDCBP-201ENST00000260130 PTGR2Q8N8N7 351 aaPredicted RBP15.93■□□□□ 0.14
SDCBP-201ENST00000260130 PHF21BQ96EK2 531 aa15.93■□□□□ 0.14
SDCBP-201ENST00000260130 ZNF304Q9HCX3 659 aa15.93■□□□□ 0.14
SDCBP-201ENST00000260130 CDC14AQ9UNH5 594 aa15.93■□□□□ 0.14
SDCBP-201ENST00000260130 PRAMEF4O60810 478 aa15.93■□□□□ 0.14
SDCBP-201ENST00000260130 PSMG1O95456 288 aa15.93■□□□□ 0.14
SDCBP-201ENST00000260130 CD63P08962 238 aa15.93■□□□□ 0.14
SDCBP-201ENST00000260130 SBK3P0C264 359 aa15.93■□□□□ 0.14
SDCBP-201ENST00000260130 EPB42P16452 691 aa15.93■□□□□ 0.14
SDCBP-201ENST00000260130 SLC34A1Q06495 639 aa15.93■□□□□ 0.14
SDCBP-201ENST00000260130 PWP1Q13610 501 aa15.93■□□□□ 0.14
SDCBP-201ENST00000260130 FAM53BQ14153 422 aa15.93■□□□□ 0.14
SDCBP-201ENST00000260130 DOC2AQ14183 400 aa15.93■□□□□ 0.14
SDCBP-201ENST00000260130 SLBPQ14493 270 aaKnown RBP eCLIP15.93■□□□□ 0.14
SDCBP-201ENST00000260130 TBCCQ15814 346 aa15.93■□□□□ 0.14
SDCBP-201ENST00000260130 PRAMEF9Q5VWM5 478 aa15.93■□□□□ 0.14
SDCBP-201ENST00000260130 METTL2BQ6P1Q9 378 aaKnown RBP15.93■□□□□ 0.14
SDCBP-201ENST00000260130 C16orf46Q6P387 395 aa15.93■□□□□ 0.14
SDCBP-201ENST00000260130 TMIGD1Q6UXZ0 262 aa15.93■□□□□ 0.14
SDCBP-201ENST00000260130 NUDCD3Q8IVD9 361 aa15.93■□□□□ 0.14
SDCBP-201ENST00000260130 KRT78Q8N1N4 520 aa15.93■□□□□ 0.14
SDCBP-201ENST00000260130 ANKRD53Q8N9V6 530 aa15.93■□□□□ 0.14
SDCBP-201ENST00000260130 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.93■□□□□ 0.14
SDCBP-201ENST00000260130 WDR34Q96EX3 536 aa15.93■□□□□ 0.14
SDCBP-201ENST00000260130 PITHD1Q9GZP4 211 aaPredicted RBP15.93■□□□□ 0.14
SDCBP-201ENST00000260130 DRC3Q9H069 523 aa15.93■□□□□ 0.14
SDCBP-201ENST00000260130 TCFL5Q9UL49 500 aa15.93■□□□□ 0.14
SDCBP-201ENST00000260130 ANGPTL3Q9Y5C1 460 aa15.93■□□□□ 0.14
SDCBP-201ENST00000260130 MAU2Q9Y6X3 613 aa15.93■□□□□ 0.14
SDCBP-201ENST00000260130 NDUFS4O43181 175 aa15.92■□□□□ 0.14
SDCBP-201ENST00000260130 SIX3O95343 332 aaPredicted RBP15.92■□□□□ 0.14
SDCBP-201ENST00000260130 SERPIND1P05546 499 aa15.92■□□□□ 0.14
SDCBP-201ENST00000260130 IRF8Q02556 426 aa15.92■□□□□ 0.14
SDCBP-201ENST00000260130 KLC1Q07866 573 aa15.92■□□□□ 0.14
SDCBP-201ENST00000260130 BST1Q10588 318 aa15.92■□□□□ 0.14
SDCBP-201ENST00000260130 CHIT1Q13231 466 aa15.92■□□□□ 0.14
SDCBP-201ENST00000260130 ERV3-1Q14264 604 aa15.92■□□□□ 0.14
SDCBP-201ENST00000260130 TMEM214Q6NUQ4 689 aaKnown RBP15.92■□□□□ 0.14
SDCBP-201ENST00000260130 MRPL14Q6P1L8 145 aaKnown RBP15.92■□□□□ 0.14
SDCBP-201ENST00000260130 OVCH1Q7RTY7 1134 aa15.92■□□□□ 0.14
SDCBP-201ENST00000260130 SYVN1Q86TM6 617 aa15.92■□□□□ 0.14
SDCBP-201ENST00000260130 KCT2Q8NC54 265 aa15.92■□□□□ 0.14
SDCBP-201ENST00000260130 ARMC2Q8NEN0 867 aa15.92■□□□□ 0.14
SDCBP-201ENST00000260130 TRPV3Q8NET8 790 aa15.92■□□□□ 0.14
SDCBP-201ENST00000260130 COL26A1Q96A83 441 aa15.92■□□□□ 0.14
SDCBP-201ENST00000260130 MOCOSQ96EN8 888 aa15.92■□□□□ 0.14
SDCBP-201ENST00000260130 EFCAB11Q9BUY7 163 aa15.92■□□□□ 0.14
SDCBP-201ENST00000260130 NMUR2Q9GZQ4 415 aa15.92■□□□□ 0.14
SDCBP-201ENST00000260130 NMRK1Q9NWW6 199 aa15.92■□□□□ 0.14
SDCBP-201ENST00000260130 COPG2Q9UBF2 871 aa15.92■□□□□ 0.14
SDCBP-201ENST00000260130 PADI2Q9Y2J8 665 aa15.92■□□□□ 0.14
SDCBP-201ENST00000260130 SEC16AO15027 2179 aa15.92■□□□□ 0.14
SDCBP-201ENST00000260130 LRRC14BA6NHZ5 514 aa15.92■□□□□ 0.14
SDCBP-201ENST00000260130 STX16-NPEPL1H3BU86 382 aa15.92■□□□□ 0.14
SDCBP-201ENST00000260130 STX16O14662 325 aa15.92■□□□□ 0.14
SDCBP-201ENST00000260130 BIRC5O15392 142 aa15.92■□□□□ 0.14
SDCBP-201ENST00000260130 FOXS1O43638 330 aa15.92■□□□□ 0.14
SDCBP-201ENST00000260130 SKAP2O75563 359 aaPredicted RBP15.92■□□□□ 0.14
SDCBP-201ENST00000260130 ALBP02768 609 aa15.92■□□□□ 0.14
SDCBP-201ENST00000260130 PRKAR1AP10644 381 aa15.92■□□□□ 0.14
SDCBP-201ENST00000260130 PGM1P36871 562 aa15.92■□□□□ 0.14
SDCBP-201ENST00000260130 CASP2P42575 452 aa15.92■□□□□ 0.14
SDCBP-201ENST00000260130 RAP1GDS1P52306 607 aa15.92■□□□□ 0.14
SDCBP-201ENST00000260130 SESN3P58005 492 aa15.92■□□□□ 0.14
SDCBP-201ENST00000260130 OCRLQ01968 901 aa15.92■□□□□ 0.14
SDCBP-201ENST00000260130 PCDH1Q08174 1060 aa15.92■□□□□ 0.14
SDCBP-201ENST00000260130 LAPTM5Q13571 262 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms