RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 DSCR3O14972 297 aa11.88□□□□□ -0.51
USP30-201ENST00000257548 TACR2P21452 398 aa11.88□□□□□ -0.51
USP30-201ENST00000257548 AP2S1P53680 142 aaPredicted RBP11.88□□□□□ -0.51
USP30-201ENST00000257548 ZBTB6Q15916 424 aa11.88□□□□□ -0.51
USP30-201ENST00000257548 NOXRED1Q6NXP6 359 aa11.88□□□□□ -0.51
USP30-201ENST00000257548 ZNF613Q6PF04 617 aa11.88□□□□□ -0.51
USP30-201ENST00000257548 TPGS1Q6ZTW0 290 aa11.88□□□□□ -0.51
USP30-201ENST00000257548 TMPRSS11BQ86T26 416 aa11.88□□□□□ -0.51
USP30-201ENST00000257548 GALNT11Q8NCW6 608 aa11.88□□□□□ -0.51
USP30-201ENST00000257548 RAB8BQ92930 207 aa11.88□□□□□ -0.51
USP30-201ENST00000257548 FBXL12Q9NXK8 326 aa11.88□□□□□ -0.51
USP30-201ENST00000257548 POLHQ9Y253 713 aa11.88□□□□□ -0.51
USP30-201ENST00000257548 POFUT2Q9Y2G5 429 aa11.88□□□□□ -0.51
USP30-201ENST00000257548 GPR52Q9Y2T5 361 aa11.88□□□□□ -0.51
USP30-201ENST00000257548 PCDH17O14917 1159 aa11.88□□□□□ -0.51
USP30-201ENST00000257548 PRPS2P11908 318 aa11.88□□□□□ -0.51
USP30-201ENST00000257548 EDNRBP24530 442 aa11.88□□□□□ -0.51
USP30-201ENST00000257548 PSEN2P49810 448 aa11.88□□□□□ -0.51
USP30-201ENST00000257548 SLC14A1Q13336 389 aa11.88□□□□□ -0.51
USP30-201ENST00000257548 PTGES3Q15185 160 aaKnown RBP11.88□□□□□ -0.51
USP30-201ENST00000257548 NFE2Q16621 373 aaPredicted RBP11.88□□□□□ -0.51
USP30-201ENST00000257548 PARP15Q460N3 678 aa11.88□□□□□ -0.51
USP30-201ENST00000257548 LAIR1Q6GTX8 287 aa11.88□□□□□ -0.51
USP30-201ENST00000257548 MARCH9Q86YJ5 346 aa11.88□□□□□ -0.51
USP30-201ENST00000257548 MDGA1Q8NFP4 955 aa11.88□□□□□ -0.51
USP30-201ENST00000257548 KCNJ9Q92806 393 aa11.88□□□□□ -0.51
USP30-201ENST00000257548 CRELD1Q96HD1 420 aa11.88□□□□□ -0.51
USP30-201ENST00000257548 CD244Q9BZW8 370 aa11.88□□□□□ -0.51
USP30-201ENST00000257548 ACTL8Q9H568 366 aa11.88□□□□□ -0.51
USP30-201ENST00000257548 FAM124BQ9H5Z6 455 aaPredicted RBP11.88□□□□□ -0.51
USP30-201ENST00000257548 SEMA3GQ9NS98 782 aa11.88□□□□□ -0.51
USP30-201ENST00000257548 PCDHGA6Q9Y5G7 932 aa11.88□□□□□ -0.51
USP30-201ENST00000257548 URB1O60287 2271 aaKnown RBP11.88□□□□□ -0.51
USP30-201ENST00000257548 POM121CA8CG34 1229 aa11.88□□□□□ -0.51
USP30-201ENST00000257548 FZD9O00144 591 aa11.88□□□□□ -0.51
USP30-201ENST00000257548 WNT9AO14904 365 aa11.88□□□□□ -0.51
USP30-201ENST00000257548 ENTPD6O75354 484 aa11.88□□□□□ -0.51
USP30-201ENST00000257548 ATXN1LP0C7T5 689 aaKnown RBP11.88□□□□□ -0.51
USP30-201ENST00000257548 ITGAMP11215 1152 aa11.88□□□□□ -0.51
USP30-201ENST00000257548 DRD5P21918 477 aa11.88□□□□□ -0.51
USP30-201ENST00000257548 BUD31P41223 144 aaPredicted RBP11.88□□□□□ -0.51
USP30-201ENST00000257548 ATP12AP54707 1039 aa11.88□□□□□ -0.51
USP30-201ENST00000257548 SCARB2Q14108 478 aa11.88□□□□□ -0.51
USP30-201ENST00000257548 TBCEQ15813 527 aaPredicted RBP11.88□□□□□ -0.51
USP30-201ENST00000257548 DCST1Q5T197 706 aa11.88□□□□□ -0.51
USP30-201ENST00000257548 IER5LQ5T953 404 aa11.88□□□□□ -0.51
USP30-201ENST00000257548 FRG2Q64ET8 278 aa11.88□□□□□ -0.51
USP30-201ENST00000257548 TAPT1Q6NXT6 567 aa11.88□□□□□ -0.51
USP30-201ENST00000257548 ADGRG2Q8IZP9 1017 aa11.88□□□□□ -0.51
USP30-201ENST00000257548 ARRDC2Q8TBH0 407 aa11.88□□□□□ -0.51
USP30-201ENST00000257548 ASB12Q8WXK4 309 aa11.88□□□□□ -0.51
USP30-201ENST00000257548 FRG2BQ96QU4 278 aa11.88□□□□□ -0.51
USP30-201ENST00000257548 ABHD16BQ9H3Z7 469 aa11.88□□□□□ -0.51
USP30-201ENST00000257548 HEBP1Q9NRV9 189 aa11.88□□□□□ -0.51
USP30-201ENST00000257548 RNF181Q9P0P0 153 aa11.88□□□□□ -0.51
USP30-201ENST00000257548 PSORS1C1Q9UIG5 152 aa11.88□□□□□ -0.51
USP30-201ENST00000257548 POLR2AP24928 1970 aaKnown RBP11.88□□□□□ -0.51
USP30-201ENST00000257548 A0A1W2PRG6 482 aa11.87□□□□□ -0.51
USP30-201ENST00000257548 OR7A17O14581 309 aa11.87□□□□□ -0.51
USP30-201ENST00000257548 NCR1O76036 304 aa11.87□□□□□ -0.51
USP30-201ENST00000257548 CLDN7O95471 211 aa11.87□□□□□ -0.51
USP30-201ENST00000257548 TGFB1P01137 390 aa11.87□□□□□ -0.51
USP30-201ENST00000257548 CYP2A6P11509 494 aaPredicted RBP11.87□□□□□ -0.51
USP30-201ENST00000257548 PRPS1L1P21108 318 aa11.87□□□□□ -0.51
USP30-201ENST00000257548 RPS12P25398 132 aaKnown RBP11.87□□□□□ -0.51
USP30-201ENST00000257548 XKP51811 444 aa11.87□□□□□ -0.51
USP30-201ENST00000257548 ACLYP53396 1101 aa11.87□□□□□ -0.51
USP30-201ENST00000257548 CXCR4P61073 352 aa11.87□□□□□ -0.51
USP30-201ENST00000257548 GPR19Q15760 415 aa11.87□□□□□ -0.51
USP30-201ENST00000257548 TRIM71Q2Q1W2 868 aaKnown RBP11.87□□□□□ -0.51
USP30-201ENST00000257548 AKIRIN2Q53H80 203 aa11.87□□□□□ -0.51
USP30-201ENST00000257548 LAIR2Q6ISS4 152 aa11.87□□□□□ -0.51
USP30-201ENST00000257548 PAQR6Q6TCH4 344 aa11.87□□□□□ -0.51
USP30-201ENST00000257548 PIAS4Q8N2W9 510 aaPredicted RBP11.87□□□□□ -0.51
USP30-201ENST00000257548 TTC9BQ8N6N2 239 aa11.87□□□□□ -0.51
USP30-201ENST00000257548 SYT14Q8NB59 555 aa11.87□□□□□ -0.51
USP30-201ENST00000257548 SIMC1Q8NDZ2 872 aa11.87□□□□□ -0.51
USP30-201ENST00000257548 ZNF671Q8TAW3 534 aa11.87□□□□□ -0.51
USP30-201ENST00000257548 SLC9A6Q92581 669 aa11.87□□□□□ -0.51
USP30-201ENST00000257548 ACBD6Q9BR61 282 aa11.87□□□□□ -0.51
USP30-201ENST00000257548 ACPTQ9BZG2 426 aa11.87□□□□□ -0.51
USP30-201ENST00000257548 ABCG5Q9H222 651 aa11.87□□□□□ -0.51
USP30-201ENST00000257548 EVA1BQ9NVM1 165 aa11.87□□□□□ -0.51
USP30-201ENST00000257548 IL20RAQ9UHF4 553 aa11.87□□□□□ -0.51
USP30-201ENST00000257548 NCKAP1Q9Y2A7 1128 aa11.87□□□□□ -0.51
USP30-201ENST00000257548 YARS2Q9Y2Z4 477 aaKnown RBP11.87□□□□□ -0.51
USP30-201ENST00000257548 ALG5Q9Y673 324 aa11.87□□□□□ -0.51
USP30-201ENST00000257548 SDK1Q7Z5N4 2213 aa11.87□□□□□ -0.51
USP30-201ENST00000257548 C2orf92A0A1B0GVN3 265 aa11.87□□□□□ -0.51
USP30-201ENST00000257548 A0A1W2PPK0 400 aa11.87□□□□□ -0.51
USP30-201ENST00000257548 PCDH7O60245 1069 aa11.87□□□□□ -0.51
USP30-201ENST00000257548 PLATP00750 562 aa11.87□□□□□ -0.51
USP30-201ENST00000257548 PTPN2P17706 415 aa11.87□□□□□ -0.51
USP30-201ENST00000257548 BLVRAP53004 296 aa11.87□□□□□ -0.51
USP30-201ENST00000257548 MLLT1Q03111 559 aaPredicted RBP11.87□□□□□ -0.51
USP30-201ENST00000257548 SERINC3Q13530 473 aa11.87□□□□□ -0.51
USP30-201ENST00000257548 OR2G6Q5TZ20 316 aa11.87□□□□□ -0.51
USP30-201ENST00000257548 KDM4DQ6B0I6 523 aa11.87□□□□□ -0.51
USP30-201ENST00000257548 TRIM40Q6P9F5 258 aa11.87□□□□□ -0.51
USP30-201ENST00000257548 PAWRQ96IZ0 340 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms