RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 HIST2H2AA3Q6FI13 130 aa17.92■□□□□ 0.46
PDLIM4-201ENST00000253754 SPARTQ8N0X7 666 aa17.92■□□□□ 0.46
PDLIM4-201ENST00000253754 PIK3C3Q8NEB9 887 aa17.92■□□□□ 0.46
PDLIM4-201ENST00000253754 OR13F1Q8NGS4 319 aa17.92■□□□□ 0.46
PDLIM4-201ENST00000253754 ATP6V1HQ9UI12 483 aa17.92■□□□□ 0.46
PDLIM4-201ENST00000253754 MYO10Q9HD67 2058 aa17.91■□□□□ 0.46
PDLIM4-201ENST00000253754 A0A1W2PPW3 197 aa17.91■□□□□ 0.46
PDLIM4-201ENST00000253754 VEGFDO43915 354 aa17.91■□□□□ 0.46
PDLIM4-201ENST00000253754 EPHA2P29317 976 aa17.91■□□□□ 0.46
PDLIM4-201ENST00000253754 SEC13P55735 322 aa17.91■□□□□ 0.46
PDLIM4-201ENST00000253754 IL5RAQ01344 420 aa17.91■□□□□ 0.46
PDLIM4-201ENST00000253754 VEZF1Q14119 521 aa17.91■□□□□ 0.46
PDLIM4-201ENST00000253754 PDZD3Q86UT5 571 aa17.91■□□□□ 0.46
PDLIM4-201ENST00000253754 BPIFB6Q8NFQ5 453 aa17.91■□□□□ 0.46
PDLIM4-201ENST00000253754 GAB3Q8WWW8 586 aa17.91■□□□□ 0.46
PDLIM4-201ENST00000253754 COX14Q96I36 57 aa17.91■□□□□ 0.46
PDLIM4-201ENST00000253754 FAM210AQ96ND0 272 aa17.91■□□□□ 0.46
PDLIM4-201ENST00000253754 BHLHE41Q9C0J9 482 aaPredicted RBP17.91■□□□□ 0.46
PDLIM4-201ENST00000253754 LHPPQ9H008 270 aa17.91■□□□□ 0.46
PDLIM4-201ENST00000253754 GABARAPL1Q9H0R8 117 aa17.91■□□□□ 0.46
PDLIM4-201ENST00000253754 TIMMDC1Q9NPL8 285 aa17.91■□□□□ 0.46
PDLIM4-201ENST00000253754 SIRT5Q9NXA8 310 aa17.91■□□□□ 0.46
PDLIM4-201ENST00000253754 SPASTQ9UBP0 616 aa17.91■□□□□ 0.46
PDLIM4-201ENST00000253754 BAG5Q9UL15 447 aa17.91■□□□□ 0.46
PDLIM4-201ENST00000253754 STON1Q9Y6Q2 735 aa17.91■□□□□ 0.46
PDLIM4-201ENST00000253754 PTGES3LE9PB15 166 aa17.91■□□□□ 0.46
PDLIM4-201ENST00000253754 ANHXE9PGG2 379 aa17.91■□□□□ 0.46
PDLIM4-201ENST00000253754 SLC1A7O00341 560 aa17.91■□□□□ 0.46
PDLIM4-201ENST00000253754 SLC16A6O15403 523 aa17.91■□□□□ 0.46
PDLIM4-201ENST00000253754 XPNPEP2O43895 674 aa17.91■□□□□ 0.46
PDLIM4-201ENST00000253754 DNAJA1P31689 397 aaKnown RBP17.91■□□□□ 0.46
PDLIM4-201ENST00000253754 DRD3P35462 400 aa17.91■□□□□ 0.46
PDLIM4-201ENST00000253754 CLK3P49761 638 aaKnown RBP17.91■□□□□ 0.46
PDLIM4-201ENST00000253754 CYP4F2P78329 520 aa17.91■□□□□ 0.46
PDLIM4-201ENST00000253754 KCNJ10P78508 379 aa17.91■□□□□ 0.46
PDLIM4-201ENST00000253754 SKIV2LQ15477 1246 aaKnown RBP17.91■□□□□ 0.46
PDLIM4-201ENST00000253754 IQCCQ4KMZ1 466 aa17.91■□□□□ 0.46
PDLIM4-201ENST00000253754 FGD3Q5JSP0 725 aa17.91■□□□□ 0.46
PDLIM4-201ENST00000253754 DUS1LQ6P1R4 473 aaKnown RBP17.91■□□□□ 0.46
PDLIM4-201ENST00000253754 PNCKQ6P2M8 343 aa17.91■□□□□ 0.46
PDLIM4-201ENST00000253754 AMZ2Q86W34 360 aa17.91■□□□□ 0.46
PDLIM4-201ENST00000253754 ZNF513Q8N8E2 541 aaPredicted RBP17.91■□□□□ 0.46
PDLIM4-201ENST00000253754 TFGQ92734 400 aaPredicted RBP17.91■□□□□ 0.46
PDLIM4-201ENST00000253754 POP5Q969H6 163 aaKnown RBP17.91■□□□□ 0.46
PDLIM4-201ENST00000253754 PPCDCQ96CD2 204 aa17.91■□□□□ 0.46
PDLIM4-201ENST00000253754 SLC35A5Q9BS91 424 aa17.91■□□□□ 0.46
PDLIM4-201ENST00000253754 EHD1Q9H4M9 534 aa17.91■□□□□ 0.46
PDLIM4-201ENST00000253754 C1QTNF3-AMACRE9PGA6 284 aa17.9■□□□□ 0.46
PDLIM4-201ENST00000253754 ZNF701M0R085 212 aaPredicted RBP17.9■□□□□ 0.46
PDLIM4-201ENST00000253754 MID1O15344 667 aa17.9■□□□□ 0.46
PDLIM4-201ENST00000253754 IL3P08700 152 aa17.9■□□□□ 0.46
PDLIM4-201ENST00000253754 POU3F3P20264 500 aaPredicted RBP17.9■□□□□ 0.46
PDLIM4-201ENST00000253754 CD247P20963 164 aa17.9■□□□□ 0.46
PDLIM4-201ENST00000253754 PSMB5P28074 263 aa17.9■□□□□ 0.46
PDLIM4-201ENST00000253754 TAS2R38P59533 333 aa17.9■□□□□ 0.46
PDLIM4-201ENST00000253754 CDK3Q00526 305 aa17.9■□□□□ 0.46
PDLIM4-201ENST00000253754 KDM4DQ6B0I6 523 aa17.9■□□□□ 0.46
PDLIM4-201ENST00000253754 DSG4Q86SJ6 1040 aa17.9■□□□□ 0.46
PDLIM4-201ENST00000253754 C7orf34Q96L11 122 aa17.9■□□□□ 0.46
PDLIM4-201ENST00000253754 DOK1Q99704 481 aa17.9■□□□□ 0.46
PDLIM4-201ENST00000253754 ASPSCR1Q9BZE9 553 aa17.9■□□□□ 0.46
PDLIM4-201ENST00000253754 CUEDC1Q9NWM3 386 aaPredicted RBP17.9■□□□□ 0.46
PDLIM4-201ENST00000253754 THUMPD1Q9NXG2 353 aaKnown RBP17.9■□□□□ 0.46
PDLIM4-201ENST00000253754 ZNF282Q9UDV7 671 aaPredicted RBP17.9■□□□□ 0.46
PDLIM4-201ENST00000253754 SERGEFQ9UGK8 458 aa17.9■□□□□ 0.46
PDLIM4-201ENST00000253754 TAC3Q9UHF0 121 aa17.9■□□□□ 0.46
PDLIM4-201ENST00000253754 OR1A2Q9Y585 309 aa17.9■□□□□ 0.46
PDLIM4-201ENST00000253754 RTCAO00442 366 aaKnown RBP17.89■□□□□ 0.46
PDLIM4-201ENST00000253754 ITGAMP11215 1152 aa17.89■□□□□ 0.46
PDLIM4-201ENST00000253754 HOXB6P17509 224 aaKnown RBP17.89■□□□□ 0.46
PDLIM4-201ENST00000253754 FPR1P21462 350 aa17.89■□□□□ 0.46
PDLIM4-201ENST00000253754 PCGF2P35227 344 aa17.89■□□□□ 0.46
PDLIM4-201ENST00000253754 TIE1P35590 1138 aa17.89■□□□□ 0.46
PDLIM4-201ENST00000253754 WSCD2Q2TBF2 565 aa17.89■□□□□ 0.46
PDLIM4-201ENST00000253754 LAIR1Q6GTX8 287 aa17.89■□□□□ 0.46
PDLIM4-201ENST00000253754 FAM71E1Q6IPT2 247 aa17.89■□□□□ 0.46
PDLIM4-201ENST00000253754 TMIGD1Q6UXZ0 262 aa17.89■□□□□ 0.46
PDLIM4-201ENST00000253754 METTL4Q8N3J2 472 aa17.89■□□□□ 0.46
PDLIM4-201ENST00000253754 TBC1D20Q96BZ9 403 aa17.89■□□□□ 0.46
PDLIM4-201ENST00000253754 HDAC8Q9BY41 377 aa17.89■□□□□ 0.46
PDLIM4-201ENST00000253754 MBNL1Q9NR56 388 aaKnown RBP17.89■□□□□ 0.46
PDLIM4-201ENST00000253754 ZNF451Q9Y4E5 1061 aa17.89■□□□□ 0.46
PDLIM4-201ENST00000253754 K7EQS6 105 aa17.89■□□□□ 0.45
PDLIM4-201ENST00000253754 SUV39H1O43463 412 aa17.89■□□□□ 0.45
PDLIM4-201ENST00000253754 PI15O43692 258 aa17.89■□□□□ 0.45
PDLIM4-201ENST00000253754 SEC14L2O76054 403 aa17.89■□□□□ 0.45
PDLIM4-201ENST00000253754 TBX6O95947 436 aaPredicted RBP17.89■□□□□ 0.45
PDLIM4-201ENST00000253754 FMO3P31513 532 aa17.89■□□□□ 0.45
PDLIM4-201ENST00000253754 TTKP33981 857 aa17.89■□□□□ 0.45
PDLIM4-201ENST00000253754 ARHGDIAP52565 204 aa17.89■□□□□ 0.45
PDLIM4-201ENST00000253754 ITGA1P56199 1179 aa17.89■□□□□ 0.45
PDLIM4-201ENST00000253754 CDK5R2Q13319 367 aa17.89■□□□□ 0.45
PDLIM4-201ENST00000253754 PDE7AQ13946 482 aa17.89■□□□□ 0.45
PDLIM4-201ENST00000253754 CYP27C1Q4G0S4 372 aa17.89■□□□□ 0.45
PDLIM4-201ENST00000253754 ZC3H12BQ5HYM0 836 aaKnown RBP17.89■□□□□ 0.45
PDLIM4-201ENST00000253754 PRPF38BQ5VTL8 546 aaKnown RBP17.89■□□□□ 0.45
PDLIM4-201ENST00000253754 UNC5DQ6UXZ4 953 aa17.89■□□□□ 0.45
PDLIM4-201ENST00000253754 ADAMTSL4Q6UY14 1074 aa17.89■□□□□ 0.45
PDLIM4-201ENST00000253754 TSEN54Q7Z6J9 526 aaKnown RBP17.89■□□□□ 0.45
PDLIM4-201ENST00000253754 C11orf65Q8NCR3 313 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms