RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 ZNF821O75541 412 aaPredicted RBP17.72■□□□□ 0.43
LRP3-201ENST00000253193 TGM1P22735 817 aa17.72■□□□□ 0.43
LRP3-201ENST00000253193 GZMMP51124 257 aa17.72■□□□□ 0.43
LRP3-201ENST00000253193 MANFP55145 182 aaKnown RBP17.72■□□□□ 0.43
LRP3-201ENST00000253193 TBPL1P62380 186 aa17.72■□□□□ 0.43
LRP3-201ENST00000253193 HSPB3Q12988 150 aa17.72■□□□□ 0.43
LRP3-201ENST00000253193 GBX1Q14549 363 aa17.72■□□□□ 0.43
LRP3-201ENST00000253193 GRIN2CQ14957 1233 aa17.72■□□□□ 0.43
LRP3-201ENST00000253193 CCDC92Q53HC0 331 aaPredicted RBP17.72■□□□□ 0.43
LRP3-201ENST00000253193 TPRG1LQ5T0D9 272 aa17.72■□□□□ 0.43
LRP3-201ENST00000253193 COMMD6Q7Z4G1 85 aa17.72■□□□□ 0.43
LRP3-201ENST00000253193 SLC34A3Q8N130 599 aa17.72■□□□□ 0.43
LRP3-201ENST00000253193 ZSCAN5AQ9BUG6 496 aa17.72■□□□□ 0.43
LRP3-201ENST00000253193 SORBS1Q9BX66 1292 aaKnown RBP17.72■□□□□ 0.43
LRP3-201ENST00000253193 RNF167Q9H6Y7 350 aa17.72■□□□□ 0.43
LRP3-201ENST00000253193 DYRK4Q9NR20 520 aa17.72■□□□□ 0.43
LRP3-201ENST00000253193 LAMA2P24043 3122 aaKnown RBP17.72■□□□□ 0.43
LRP3-201ENST00000253193 TRBC2A0A5B9 178 aa17.72■□□□□ 0.43
LRP3-201ENST00000253193 SLC16A5O15375 505 aa17.72■□□□□ 0.43
LRP3-201ENST00000253193 TLL1O43897 1013 aa17.72■□□□□ 0.43
LRP3-201ENST00000253193 DEFA1P59665 94 aa17.72■□□□□ 0.43
LRP3-201ENST00000253193 DEFA3P59666 94 aa17.72■□□□□ 0.43
LRP3-201ENST00000253193 SELENOWP63302 87 aa17.72■□□□□ 0.43
LRP3-201ENST00000253193 ZNF763Q0D2J5 394 aa17.72■□□□□ 0.43
LRP3-201ENST00000253193 VEZF1Q14119 521 aa17.72■□□□□ 0.43
LRP3-201ENST00000253193 ARHGAP15Q53QZ3 475 aa17.72■□□□□ 0.43
LRP3-201ENST00000253193 SYT6Q5T7P8 510 aaPredicted RBP17.72■□□□□ 0.43
LRP3-201ENST00000253193 SLC39A11Q8N1S5 342 aa17.72■□□□□ 0.43
LRP3-201ENST00000253193 OR8J2Q8NGG1 315 aa17.72■□□□□ 0.43
LRP3-201ENST00000253193 GLYATL1Q969I3 302 aa17.72■□□□□ 0.43
LRP3-201ENST00000253193 REEP4Q9H6H4 257 aa17.72■□□□□ 0.43
LRP3-201ENST00000253193 CTPS2Q9NRF8 586 aa17.72■□□□□ 0.43
LRP3-201ENST00000253193 CLN6Q9NWW5 311 aa17.72■□□□□ 0.43
LRP3-201ENST00000253193 GFYI3L273 518 aa17.71■□□□□ 0.43
LRP3-201ENST00000253193 CCNB2O95067 398 aa17.71■□□□□ 0.43
LRP3-201ENST00000253193 IFNW1P05000 195 aa17.71■□□□□ 0.43
LRP3-201ENST00000253193 HLA-EP13747 358 aa17.71■□□□□ 0.43
LRP3-201ENST00000253193 LAG3P18627 525 aa17.71■□□□□ 0.43
LRP3-201ENST00000253193 PTPN6P29350 595 aa17.71■□□□□ 0.43
LRP3-201ENST00000253193 CXCR4P61073 352 aa17.71■□□□□ 0.43
LRP3-201ENST00000253193 SF3B4Q15427 424 aaKnown RBP eCLIP17.71■□□□□ 0.435e-6■■■■□ 20.8
LRP3-201ENST00000253193 TEAD2Q15562 447 aa17.71■□□□□ 0.43
LRP3-201ENST00000253193 CCDC149Q6ZUS6 474 aa17.71■□□□□ 0.43
LRP3-201ENST00000253193 RASGEF1AQ8N9B8 481 aa17.71■□□□□ 0.43
LRP3-201ENST00000253193 OR2A12Q8NGT7 310 aa17.71■□□□□ 0.43
LRP3-201ENST00000253193 RAB8BQ92930 207 aa17.71■□□□□ 0.43
LRP3-201ENST00000253193 CAPNS2Q96L46 248 aa17.71■□□□□ 0.43
LRP3-201ENST00000253193 FAM129BQ96TA1 746 aa17.71■□□□□ 0.43
LRP3-201ENST00000253193 STOML2Q9UJZ1 356 aa17.71■□□□□ 0.43
LRP3-201ENST00000253193 KCNE1BA0A087WTH5 132 aa17.71■□□□□ 0.43
LRP3-201ENST00000253193 QSOX1O00391 747 aa17.71■□□□□ 0.43
LRP3-201ENST00000253193 RFPL2O75678 378 aa17.71■□□□□ 0.43
LRP3-201ENST00000253193 GSTM1P09488 218 aa17.71■□□□□ 0.43
LRP3-201ENST00000253193 WNT3P56703 355 aa17.71■□□□□ 0.43
LRP3-201ENST00000253193 DEFB103AP81534 67 aa17.71■□□□□ 0.43
LRP3-201ENST00000253193 PLEKHG7Q6ZR37 379 aa17.71■□□□□ 0.43
LRP3-201ENST00000253193 TCEAL4Q96EI5 215 aa17.71■□□□□ 0.43
LRP3-201ENST00000253193 TMPRSS11EQ9UL52 423 aa17.71■□□□□ 0.43
LRP3-201ENST00000253193 RTCAO00442 366 aaKnown RBP17.71■□□□□ 0.43
LRP3-201ENST00000253193 TNNI3P19429 210 aa17.71■□□□□ 0.43
LRP3-201ENST00000253193 HOXA9P31269 272 aa17.71■□□□□ 0.43
LRP3-201ENST00000253193 MAGEA2P43356 314 aa17.71■□□□□ 0.43
LRP3-201ENST00000253193 SELENBP1Q13228 472 aa17.71■□□□□ 0.43
LRP3-201ENST00000253193 MSANTD1Q6ZTZ1 278 aa17.71■□□□□ 0.43
LRP3-201ENST00000253193 NIPSNAP1Q9BPW8 284 aa17.71■□□□□ 0.43
LRP3-201ENST00000253193 CREBZFQ9NS37 354 aa17.71■□□□□ 0.43
LRP3-201ENST00000253193 SCHIP1Q9P0W5 487 aaPredicted RBP17.71■□□□□ 0.43
LRP3-201ENST00000253193 PCDHGA6Q9Y5G7 932 aa17.71■□□□□ 0.43
LRP3-201ENST00000253193 VWA8A3KMH1 1905 aa17.7■□□□□ 0.42
LRP3-201ENST00000253193 EIF3FO00303 357 aaPredicted RBP17.7■□□□□ 0.42
LRP3-201ENST00000253193 ZNF30P17039 623 aa17.7■□□□□ 0.42
LRP3-201ENST00000253193 IDSP22304 550 aa17.7■□□□□ 0.42
LRP3-201ENST00000253193 PLPP4Q5VZY2 271 aa17.7■□□□□ 0.42
LRP3-201ENST00000253193 GRHL2Q6ISB3 625 aa17.7■□□□□ 0.42
LRP3-201ENST00000253193 CASP12Q6UXS9 341 aa17.7■□□□□ 0.42
LRP3-201ENST00000253193 HMGN2P46Q86SG4 172 aa17.7■□□□□ 0.42
LRP3-201ENST00000253193 WDR48Q8TAF3 677 aa17.7■□□□□ 0.42
LRP3-201ENST00000253193 BTN2A2Q8WVV5 523 aa17.7■□□□□ 0.42
LRP3-201ENST00000253193 EXOSC8Q96B26 276 aaKnown RBP17.7■□□□□ 0.42
LRP3-201ENST00000253193 HS3ST2Q9Y278 367 aa17.7■□□□□ 0.42
LRP3-201ENST00000253193 POFUT2Q9Y2G5 429 aa17.7■□□□□ 0.42
LRP3-201ENST00000253193 PATJQ8NI35 1801 aa17.7■□□□□ 0.42
LRP3-201ENST00000253193 PRR23AA6NEV1 266 aa17.7■□□□□ 0.42
LRP3-201ENST00000253193 IMPA1P29218 277 aa17.7■□□□□ 0.42
LRP3-201ENST00000253193 FEN1P39748 380 aaKnown RBP17.7■□□□□ 0.42
LRP3-201ENST00000253193 TSTQ16762 297 aaKnown RBP17.7■□□□□ 0.42
LRP3-201ENST00000253193 USP43Q70EL4 1123 aa17.7■□□□□ 0.42
LRP3-201ENST00000253193 ARMC8Q8IUR7 673 aa17.7■□□□□ 0.42
LRP3-201ENST00000253193 FCGR1BQ92637 280 aa17.7■□□□□ 0.42
LRP3-201ENST00000253193 IRF7Q92985 503 aa17.7■□□□□ 0.42
LRP3-201ENST00000253193 C5AR2Q9P296 337 aa17.7■□□□□ 0.42
LRP3-201ENST00000253193 CLCA1A8K7I4 914 aa17.7■□□□□ 0.42
LRP3-201ENST00000253193 FADS2P1A8MWK0 482 aa17.7■□□□□ 0.42
LRP3-201ENST00000253193 PLK4O00444 970 aa17.7■□□□□ 0.42
LRP3-201ENST00000253193 PCDH17O14917 1159 aa17.7■□□□□ 0.42
LRP3-201ENST00000253193 ASNA1O43681 348 aa17.7■□□□□ 0.42
LRP3-201ENST00000253193 KRT75O95678 551 aa17.7■□□□□ 0.42
LRP3-201ENST00000253193 ADH1AP07327 375 aa17.7■□□□□ 0.42
LRP3-201ENST00000253193 AZGP1P25311 298 aaKnown RBP17.7■□□□□ 0.42
LRP3-201ENST00000253193 NR4A2P43354 598 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms