RNA–Protein interactions for RNA: ENST00000248633.8

PEX1-201, Transcript of peroxisomal biogenesis factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PEX1, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-201ENST00000248633 KLHL12Q53G59 568 aa12.87□□□□□ -0.35
PEX1-201ENST00000248633 DCST1Q5T197 706 aa12.87□□□□□ -0.35
PEX1-201ENST00000248633 CHST9Q7L1S5 443 aa12.87□□□□□ -0.35
PEX1-201ENST00000248633 VN1R5Q7Z5H4 357 aa12.87□□□□□ -0.35
PEX1-201ENST00000248633 ELMOD2Q8IZ81 293 aa12.87□□□□□ -0.35
PEX1-201ENST00000248633 MDGA1Q8NFP4 955 aa12.87□□□□□ -0.35
PEX1-201ENST00000248633 BPIFB1Q8TDL5 484 aa12.87□□□□□ -0.35
PEX1-201ENST00000248633 C11orf24Q96F05 449 aaPredicted RBP12.87□□□□□ -0.35
PEX1-201ENST00000248633 SLC39A13Q96H72 371 aa12.87□□□□□ -0.35
PEX1-201ENST00000248633 SLC35A5Q9BS91 424 aa12.87□□□□□ -0.35
PEX1-201ENST00000248633 WACQ9BTA9 647 aa12.87□□□□□ -0.35
PEX1-201ENST00000248633 BEX1Q9HBH7 125 aa12.87□□□□□ -0.35
PEX1-201ENST00000248633 TDP1Q9NUW8 608 aa12.87□□□□□ -0.35
PEX1-201ENST00000248633 PRAMEF33A0A0G2JMD5 474 aa12.86□□□□□ -0.35
PEX1-201ENST00000248633 PRAMEF10O60809 474 aa12.86□□□□□ -0.35
PEX1-201ENST00000248633 SLC2A2P11168 524 aaPredicted RBP12.86□□□□□ -0.35
PEX1-201ENST00000248633 TACR1P25103 407 aa12.86□□□□□ -0.35
PEX1-201ENST00000248633 MLLT10P55197 1068 aa12.86□□□□□ -0.35
PEX1-201ENST00000248633 MRPL58Q14197 206 aaKnown RBP12.86□□□□□ -0.35
PEX1-201ENST00000248633 NOXRED1Q6NXP6 359 aa12.86□□□□□ -0.35
PEX1-201ENST00000248633 CADM2Q8N3J6 435 aa12.86□□□□□ -0.35
PEX1-201ENST00000248633 TCEANCQ8N8B7 351 aa12.86□□□□□ -0.35
PEX1-201ENST00000248633 ZFP41Q8N8Y5 198 aa12.86□□□□□ -0.35
PEX1-201ENST00000248633 ZNF548Q8NEK5 533 aaPredicted RBP12.86□□□□□ -0.35
PEX1-201ENST00000248633 EXOSC8Q96B26 276 aaKnown RBP12.86□□□□□ -0.35
PEX1-201ENST00000248633 TRIM43Q96BQ3 446 aaPredicted RBP12.86□□□□□ -0.35
PEX1-201ENST00000248633 NECTIN4Q96NY8 510 aa12.86□□□□□ -0.35
PEX1-201ENST00000248633 FAM129BQ96TA1 746 aa12.86□□□□□ -0.35
PEX1-201ENST00000248633 IKZF5Q9H5V7 419 aa12.86□□□□□ -0.35
PEX1-201ENST00000248633 CWH43Q9H720 699 aa12.86□□□□□ -0.35
PEX1-201ENST00000248633 MAPRE3Q9UPY8 281 aa12.86□□□□□ -0.35
PEX1-201ENST00000248633 CORO2BQ9UQ03 480 aa12.86□□□□□ -0.35
PEX1-201ENST00000248633 CAPNS1P04632 268 aa12.86□□□□□ -0.35
PEX1-201ENST00000248633 ATF4P18848 351 aaPredicted RBP12.86□□□□□ -0.35
PEX1-201ENST00000248633 SOX3P41225 446 aa12.86□□□□□ -0.35
PEX1-201ENST00000248633 CARD16Q5EG05 197 aa12.86□□□□□ -0.35
PEX1-201ENST00000248633 PPP2R2DQ66LE6 453 aa12.86□□□□□ -0.35
PEX1-201ENST00000248633 SHQ1Q6PI26 577 aaKnown RBP12.86□□□□□ -0.35
PEX1-201ENST00000248633 TSPYL5Q86VY4 417 aaPredicted RBP12.86□□□□□ -0.35
PEX1-201ENST00000248633 PGBD5Q8N414 524 aa12.86□□□□□ -0.35
PEX1-201ENST00000248633 ARRDC2Q8TBH0 407 aa12.86□□□□□ -0.35
PEX1-201ENST00000248633 APIPQ96GX9 242 aa12.86□□□□□ -0.35
PEX1-201ENST00000248633 FRMD6Q96NE9 622 aa12.86□□□□□ -0.35
PEX1-201ENST00000248633 IL1RAPQ9NPH3 570 aa12.86□□□□□ -0.35
PEX1-201ENST00000248633 EQTNQ9NQ60 294 aa12.86□□□□□ -0.35
PEX1-201ENST00000248633 MRPL39Q9NYK5 338 aaKnown RBP12.86□□□□□ -0.35
PEX1-201ENST00000248633 TRBC2A0A5B9 178 aa12.86□□□□□ -0.35
PEX1-201ENST00000248633 TLX2O43763 284 aaPredicted RBP12.86□□□□□ -0.35
PEX1-201ENST00000248633 UGT2B17O75795 530 aa12.86□□□□□ -0.35
PEX1-201ENST00000248633 DNAJB5O75953 348 aa12.86□□□□□ -0.35
PEX1-201ENST00000248633 CH25HO95992 272 aa12.86□□□□□ -0.35
PEX1-201ENST00000248633 MYL9P24844 172 aa12.86□□□□□ -0.35
PEX1-201ENST00000248633 UGT8Q16880 541 aa12.86□□□□□ -0.35
PEX1-201ENST00000248633 BTBD16Q32M84 506 aa12.86□□□□□ -0.35
PEX1-201ENST00000248633 TUBA3EQ6PEY2 450 aa12.86□□□□□ -0.35
PEX1-201ENST00000248633 DHRS4L2Q6PKH6 230 aa12.86□□□□□ -0.35
PEX1-201ENST00000248633 NRARPQ7Z6K4 114 aa12.86□□□□□ -0.35
PEX1-201ENST00000248633 ASZ1Q8WWH4 475 aa12.86□□□□□ -0.35
PEX1-201ENST00000248633 COL26A1Q96A83 441 aa12.86□□□□□ -0.35
PEX1-201ENST00000248633 BBS4Q96RK4 519 aa12.86□□□□□ -0.35
PEX1-201ENST00000248633 MCMBPQ9BTE3 642 aa12.86□□□□□ -0.35
PEX1-201ENST00000248633 CDV3Q9UKY7 258 aaKnown RBP12.86□□□□□ -0.35
PEX1-201ENST00000248633 RIMKLBQ9ULI2 386 aa12.86□□□□□ -0.35
PEX1-201ENST00000248633 K7ERQ8 282 aa12.85□□□□□ -0.35
PEX1-201ENST00000248633 NME6O75414 186 aaPredicted RBP12.85□□□□□ -0.35
PEX1-201ENST00000248633 ATXN1LP0C7T5 689 aaKnown RBP12.85□□□□□ -0.35
PEX1-201ENST00000248633 EBLN1P0CF75 366 aa12.85□□□□□ -0.35
PEX1-201ENST00000248633 PPIBP23284 216 aaKnown RBP12.85□□□□□ -0.35
PEX1-201ENST00000248633 EPHA2P29317 976 aa12.85□□□□□ -0.35
PEX1-201ENST00000248633 CSTF2P33240 577 aaKnown RBP eCLIP12.85□□□□□ -0.35
PEX1-201ENST00000248633 GPAT3Q53EU6 434 aa12.85□□□□□ -0.35
PEX1-201ENST00000248633 CYP4Z2PQ8N1L4 340 aa12.85□□□□□ -0.35
PEX1-201ENST00000248633 AP3S1Q92572 193 aa12.85□□□□□ -0.35
PEX1-201ENST00000248633 ARMC5Q96C12 935 aa12.85□□□□□ -0.35
PEX1-201ENST00000248633 TBX5Q99593 518 aa12.85□□□□□ -0.35
PEX1-201ENST00000248633 ANKRA2Q9H9E1 313 aa12.85□□□□□ -0.35
PEX1-201ENST00000248633 SMURF1Q9HCE7 757 aa12.85□□□□□ -0.35
PEX1-201ENST00000248633 ING4Q9UNL4 249 aa12.85□□□□□ -0.35
PEX1-201ENST00000248633 WNT6Q9Y6F9 365 aa12.85□□□□□ -0.35
PEX1-201ENST00000248633 ARID1BQ8NFD5 2236 aaPredicted RBP12.85□□□□□ -0.35
PEX1-201ENST00000248633 I3L521 148 aa12.85□□□□□ -0.35
PEX1-201ENST00000248633 TLR4O00206 839 aa12.85□□□□□ -0.35
PEX1-201ENST00000248633 E2F3O00716 465 aa12.85□□□□□ -0.35
PEX1-201ENST00000248633 SLC30A4O14863 429 aa12.85□□□□□ -0.35
PEX1-201ENST00000248633 PCDH7O60245 1069 aa12.85□□□□□ -0.35
PEX1-201ENST00000248633 CPNE6O95741 557 aa12.85□□□□□ -0.35
PEX1-201ENST00000248633 ADH1CP00326 375 aa12.85□□□□□ -0.35
PEX1-201ENST00000248633 RHOP08100 348 aa12.85□□□□□ -0.35
PEX1-201ENST00000248633 CD72P21854 359 aa12.85□□□□□ -0.35
PEX1-201ENST00000248633 SLC6A4P31645 630 aa12.85□□□□□ -0.35
PEX1-201ENST00000248633 CASP3P42574 277 aa12.85□□□□□ -0.35
PEX1-201ENST00000248633 DAPP51397 102 aa12.85□□□□□ -0.35
PEX1-201ENST00000248633 GNG2P59768 71 aa12.85□□□□□ -0.35
PEX1-201ENST00000248633 AP1S1P61966 158 aa12.85□□□□□ -0.35
PEX1-201ENST00000248633 VLDLRP98155 873 aa12.85□□□□□ -0.35
PEX1-201ENST00000248633 CSTF1Q05048 431 aaKnown RBP12.85□□□□□ -0.35
PEX1-201ENST00000248633 SNX20Q7Z614 316 aa12.85□□□□□ -0.35
PEX1-201ENST00000248633 TMEM179BQ7Z7N9 219 aa12.85□□□□□ -0.35
PEX1-201ENST00000248633 NLGN4XQ8N0W4 816 aa12.85□□□□□ -0.35
PEX1-201ENST00000248633 ZNF671Q8TAW3 534 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms