RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 STOX2Q9P2F5 926 aaPredicted RBP16.26■□□□□ 0.19
CDKN1A-201ENST00000244741 TRIM64CA6NLI5 447 aa16.25■□□□□ 0.19
CDKN1A-201ENST00000244741 LMO7DNF2Z398 122 aa16.25■□□□□ 0.19
CDKN1A-201ENST00000244741 UPK1AO00322 258 aa16.25■□□□□ 0.19
CDKN1A-201ENST00000244741 ARHGAP33O14559 1287 aa16.25■□□□□ 0.19
CDKN1A-201ENST00000244741 IMPA1P29218 277 aa16.25■□□□□ 0.19
CDKN1A-201ENST00000244741 MAPKAPK3Q16644 382 aa16.25■□□□□ 0.19
CDKN1A-201ENST00000244741 CACHD1Q5VU97 1274 aa16.25■□□□□ 0.19
CDKN1A-201ENST00000244741 TMEM214Q6NUQ4 689 aaKnown RBP16.25■□□□□ 0.19
CDKN1A-201ENST00000244741 METTL2BQ6P1Q9 378 aaKnown RBP16.25■□□□□ 0.19
CDKN1A-201ENST00000244741 WASH2PQ6VEQ5 465 aa16.25■□□□□ 0.19
CDKN1A-201ENST00000244741 OR52E1Q8NGJ3 308 aa16.25■□□□□ 0.19
CDKN1A-201ENST00000244741 CLHC1Q8NHS4 586 aa16.25■□□□□ 0.19
CDKN1A-201ENST00000244741 ZNF480Q8WV37 535 aa16.25■□□□□ 0.19
CDKN1A-201ENST00000244741 WASH6PQ9NQA3 447 aa16.25■□□□□ 0.19
CDKN1A-201ENST00000244741 CPNE7Q9UBL6 633 aa16.25■□□□□ 0.19
CDKN1A-201ENST00000244741 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.25■□□□□ 0.19
CDKN1A-201ENST00000244741 A0A087WXM4 84 aa16.24■□□□□ 0.19
CDKN1A-201ENST00000244741 TRIM64A6NGJ6 449 aa16.24■□□□□ 0.19
CDKN1A-201ENST00000244741 CLDN9O95484 217 aa16.24■□□□□ 0.19
CDKN1A-201ENST00000244741 PGRP06401 933 aa16.24■□□□□ 0.19
CDKN1A-201ENST00000244741 PCNAP12004 261 aa16.24■□□□□ 0.19
CDKN1A-201ENST00000244741 ENGP17813 658 aa16.24■□□□□ 0.19
CDKN1A-201ENST00000244741 CALRP27797 417 aaKnown RBP16.24■□□□□ 0.19
CDKN1A-201ENST00000244741 HOXD12P35452 270 aa16.24■□□□□ 0.19
CDKN1A-201ENST00000244741 NAE1Q13564 534 aa16.24■□□□□ 0.19
CDKN1A-201ENST00000244741 CPSF6Q16630 551 aaKnown RBP eCLIP16.24■□□□□ 0.19
CDKN1A-201ENST00000244741 PTCHD3Q3KNS1 767 aa16.24■□□□□ 0.19
CDKN1A-201ENST00000244741 AGTRAPQ6RW13 159 aa16.24■□□□□ 0.19
CDKN1A-201ENST00000244741 FAM86B1Q8N7N1 296 aa16.24■□□□□ 0.19
CDKN1A-201ENST00000244741 TNIP2Q8NFZ5 429 aa16.24■□□□□ 0.19
CDKN1A-201ENST00000244741 OR2T12Q8NG77 320 aa16.24■□□□□ 0.19
CDKN1A-201ENST00000244741 OR10A6Q8NH74 314 aa16.24■□□□□ 0.19
CDKN1A-201ENST00000244741 FIG4Q92562 907 aa16.24■□□□□ 0.19
CDKN1A-201ENST00000244741 RAD51AP1Q96B01 352 aa16.24■□□□□ 0.19
CDKN1A-201ENST00000244741 CCDC138Q96M89 665 aa16.24■□□□□ 0.19
CDKN1A-201ENST00000244741 THUMPD3Q9BV44 507 aaKnown RBP16.24■□□□□ 0.19
CDKN1A-201ENST00000244741 CLMPQ9H6B4 373 aa16.24■□□□□ 0.19
CDKN1A-201ENST00000244741 RSL24D1Q9UHA3 163 aaKnown RBP16.24■□□□□ 0.19
CDKN1A-201ENST00000244741 A0A1B0GTQ1 180 aa16.24■□□□□ 0.19
CDKN1A-201ENST00000244741 DLL1O00548 723 aa16.24■□□□□ 0.19
CDKN1A-201ENST00000244741 VIPP01282 170 aa16.24■□□□□ 0.19
CDKN1A-201ENST00000244741 BCKDHAP12694 445 aa16.24■□□□□ 0.19
CDKN1A-201ENST00000244741 CDK9P50750 372 aaKnown RBP16.24■□□□□ 0.19
CDKN1A-201ENST00000244741 AP1S2P56377 157 aa16.24■□□□□ 0.19
CDKN1A-201ENST00000244741 ADARB1P78563 741 aaKnown RBP16.24■□□□□ 0.19
CDKN1A-201ENST00000244741 SF3A2Q15428 464 aaKnown RBP16.24■□□□□ 0.19
CDKN1A-201ENST00000244741 OTUD3Q5T2D3 398 aaPredicted RBP16.24■□□□□ 0.19
CDKN1A-201ENST00000244741 DNAJC14Q6Y2X3 702 aaPredicted RBP16.24■□□□□ 0.19
CDKN1A-201ENST00000244741 ALDH16A1Q8IZ83 802 aa16.24■□□□□ 0.19
CDKN1A-201ENST00000244741 SUMF1Q8NBK3 374 aa16.24■□□□□ 0.19
CDKN1A-201ENST00000244741 GLB1L3Q8NCI6 653 aaPredicted RBP16.24■□□□□ 0.19
CDKN1A-201ENST00000244741 OR4E2Q8NGC2 313 aa16.24■□□□□ 0.19
CDKN1A-201ENST00000244741 CCDC115Q96NT0 180 aa16.24■□□□□ 0.19
CDKN1A-201ENST00000244741 ACAT2Q9BWD1 397 aa16.24■□□□□ 0.19
CDKN1A-201ENST00000244741 ACPTQ9BZG2 426 aa16.24■□□□□ 0.19
CDKN1A-201ENST00000244741 SLC32A1Q9H598 525 aa16.24■□□□□ 0.19
CDKN1A-201ENST00000244741 ACTR8Q9H981 624 aa16.24■□□□□ 0.19
CDKN1A-201ENST00000244741 C1orf109Q9NX04 203 aa16.24■□□□□ 0.19
CDKN1A-201ENST00000244741 ASIC5Q9NY37 505 aa16.24■□□□□ 0.19
CDKN1A-201ENST00000244741 TUBA8Q9NY65 449 aaPredicted RBP16.24■□□□□ 0.19
CDKN1A-201ENST00000244741 SLC22A14Q9Y267 594 aa16.24■□□□□ 0.19
CDKN1A-201ENST00000244741 PCDHGA11Q9Y5H2 935 aa16.24■□□□□ 0.19
CDKN1A-201ENST00000244741 OTOGLQ3ZCN5 2332 aa16.23■□□□□ 0.19
CDKN1A-201ENST00000244741 PDYNP01213 254 aa16.23■□□□□ 0.19
CDKN1A-201ENST00000244741 RPN2P04844 631 aa16.23■□□□□ 0.19
CDKN1A-201ENST00000244741 IL6P05231 212 aa16.23■□□□□ 0.19
CDKN1A-201ENST00000244741 RAP2AP10114 183 aa16.23■□□□□ 0.19
CDKN1A-201ENST00000244741 EPHA8P29322 1005 aaPredicted RBP16.23■□□□□ 0.19
CDKN1A-201ENST00000244741 CYP4F3Q08477 520 aa16.23■□□□□ 0.19
CDKN1A-201ENST00000244741 GPR18Q14330 331 aa16.23■□□□□ 0.19
CDKN1A-201ENST00000244741 PLCL1Q15111 1095 aa16.23■□□□□ 0.19
CDKN1A-201ENST00000244741 GTDC1Q4AE62 458 aa16.23■□□□□ 0.19
CDKN1A-201ENST00000244741 FAM98BQ52LJ0 330 aaKnown RBP16.23■□□□□ 0.19
CDKN1A-201ENST00000244741 AP1ARQ63HQ0 302 aa16.23■□□□□ 0.19
CDKN1A-201ENST00000244741 USP51Q70EK9 711 aa16.23■□□□□ 0.19
CDKN1A-201ENST00000244741 PATL1Q86TB9 770 aaKnown RBP16.23■□□□□ 0.19
CDKN1A-201ENST00000244741 SLC29A3Q9BZD2 475 aa16.23■□□□□ 0.19
CDKN1A-201ENST00000244741 GORASP2Q9H8Y8 452 aa16.23■□□□□ 0.19
CDKN1A-201ENST00000244741 SLC6A13Q9NSD5 602 aa16.23■□□□□ 0.19
CDKN1A-201ENST00000244741 MAGED1Q9Y5V3 778 aaPredicted RBP16.23■□□□□ 0.19
CDKN1A-201ENST00000244741 COLEC10Q9Y6Z7 277 aa16.23■□□□□ 0.19
CDKN1A-201ENST00000244741 ASXL3Q9C0F0 2248 aa16.23■□□□□ 0.19
CDKN1A-201ENST00000244741 KHNYNO15037 678 aaKnown RBP16.23■□□□□ 0.19
CDKN1A-201ENST00000244741 GSTA4O15217 222 aa16.23■□□□□ 0.19
CDKN1A-201ENST00000244741 TRMUO75648 421 aaKnown RBP16.23■□□□□ 0.19
CDKN1A-201ENST00000244741 PRSS23O95084 383 aa16.23■□□□□ 0.19
CDKN1A-201ENST00000244741 GIMD1P0DJR0 217 aa16.23■□□□□ 0.19
CDKN1A-201ENST00000244741 MAPK9P45984 424 aa16.23■□□□□ 0.19
CDKN1A-201ENST00000244741 RXRGP48443 463 aa16.23■□□□□ 0.19
CDKN1A-201ENST00000244741 PHC1P78364 1004 aa16.23■□□□□ 0.19
CDKN1A-201ENST00000244741 HHEXQ03014 270 aa16.23■□□□□ 0.19
CDKN1A-201ENST00000244741 CHRNB3Q05901 458 aa16.23■□□□□ 0.19
CDKN1A-201ENST00000244741 NKG7Q16617 165 aa16.23■□□□□ 0.19
CDKN1A-201ENST00000244741 ENPP6Q6UWR7 440 aa16.23■□□□□ 0.19
CDKN1A-201ENST00000244741 RABEPKQ7Z6M1 372 aa16.23■□□□□ 0.19
CDKN1A-201ENST00000244741 TMBIM1Q969X1 311 aa16.23■□□□□ 0.19
CDKN1A-201ENST00000244741 OR52E6Q96RD3 313 aa16.23■□□□□ 0.19
CDKN1A-201ENST00000244741 TBCDQ9BTW9 1192 aa16.23■□□□□ 0.19
CDKN1A-201ENST00000244741 MENTQ9BUN1 341 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms