RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 OR2A1Q8NGT9 310 aa12.63□□□□□ -0.39
SLIRP-201ENST00000238688 WDR60Q8WVS4 1066 aa12.63□□□□□ -0.39
SLIRP-201ENST00000238688 APOLD1Q96LR9 279 aa12.63□□□□□ -0.39
SLIRP-201ENST00000238688 HBEGFQ99075 208 aa12.63□□□□□ -0.39
SLIRP-201ENST00000238688 MTERF1Q99551 399 aaKnown RBP12.63□□□□□ -0.39
SLIRP-201ENST00000238688 EFHD1Q9BUP0 239 aa12.63□□□□□ -0.39
SLIRP-201ENST00000238688 SPATA9Q9BWV2 254 aa12.63□□□□□ -0.39
SLIRP-201ENST00000238688 MYNNQ9NPC7 610 aa12.63□□□□□ -0.39
SLIRP-201ENST00000238688 PRDM8Q9NQV8 689 aa12.63□□□□□ -0.39
SLIRP-201ENST00000238688 DKK4Q9UBT3 224 aa12.63□□□□□ -0.39
SLIRP-201ENST00000238688 TBC1D29Q9UFV1 150 aa12.63□□□□□ -0.39
SLIRP-201ENST00000238688 ICKQ9UPZ9 632 aa12.63□□□□□ -0.39
SLIRP-201ENST00000238688 CORO2BQ9UQ03 480 aa12.63□□□□□ -0.39
SLIRP-201ENST00000238688 PCDHA9Q9Y5H5 950 aa12.63□□□□□ -0.39
SLIRP-201ENST00000238688 MDC1Q14676 2089 aaKnown RBP12.62□□□□□ -0.39
SLIRP-201ENST00000238688 LY6G6EA0A0G2JKS1 128 aa12.62□□□□□ -0.39
SLIRP-201ENST00000238688 AQP12BA6NM10 295 aa12.62□□□□□ -0.39
SLIRP-201ENST00000238688 A8MUI8 341 aa12.62□□□□□ -0.39
SLIRP-201ENST00000238688 SIGLEC6O43699 453 aa12.62□□□□□ -0.39
SLIRP-201ENST00000238688 RFPL3O75679 317 aa12.62□□□□□ -0.39
SLIRP-201ENST00000238688 PIAS2O75928 621 aa12.62□□□□□ -0.39
SLIRP-201ENST00000238688 NME1P15531 152 aaKnown RBP12.62□□□□□ -0.39
SLIRP-201ENST00000238688 HTR1EP28566 365 aa12.62□□□□□ -0.39
SLIRP-201ENST00000238688 NEK2P51955 445 aa12.62□□□□□ -0.39
SLIRP-201ENST00000238688 SLC7A2P52569 658 aa12.62□□□□□ -0.39
SLIRP-201ENST00000238688 SLC34A1Q06495 639 aa12.62□□□□□ -0.39
SLIRP-201ENST00000238688 TGM3Q08188 693 aa12.62□□□□□ -0.39
SLIRP-201ENST00000238688 TSTA3Q13630 321 aaPredicted RBP12.62□□□□□ -0.39
SLIRP-201ENST00000238688 FZD2Q14332 565 aa12.62□□□□□ -0.39
SLIRP-201ENST00000238688 ELOCQ15369 112 aa12.62□□□□□ -0.39
SLIRP-201ENST00000238688 CATSPEREQ5SY80 951 aa12.62□□□□□ -0.39
SLIRP-201ENST00000238688 DEPDC1Q5TB30 811 aa12.62□□□□□ -0.39
SLIRP-201ENST00000238688 KLHL35Q6PF15 583 aa12.62□□□□□ -0.39
SLIRP-201ENST00000238688 SUSD1Q6UWL2 747 aa12.62□□□□□ -0.39
SLIRP-201ENST00000238688 SLC9B2Q86UD5 537 aa12.62□□□□□ -0.39
SLIRP-201ENST00000238688 PACS2Q86VP3 889 aa12.62□□□□□ -0.39
SLIRP-201ENST00000238688 TMPRSS12Q86WS5 348 aa12.62□□□□□ -0.39
SLIRP-201ENST00000238688 TRIM48Q8IWZ4 208 aa12.62□□□□□ -0.39
SLIRP-201ENST00000238688 AQP12AQ8IXF9 295 aa12.62□□□□□ -0.39
SLIRP-201ENST00000238688 SLC15A3Q8IY34 581 aa12.62□□□□□ -0.39
SLIRP-201ENST00000238688 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.62□□□□□ -0.39
SLIRP-201ENST00000238688 TMEM132CQ8N3T6 1108 aa12.62□□□□□ -0.39
SLIRP-201ENST00000238688 LINC01555Q8NAE3 123 aa12.62□□□□□ -0.39
SLIRP-201ENST00000238688 GTF2H4Q92759 462 aa12.62□□□□□ -0.39
SLIRP-201ENST00000238688 CCDC124Q96CT7 223 aaKnown RBP12.62□□□□□ -0.39
SLIRP-201ENST00000238688 APIPQ96GX9 242 aa12.62□□□□□ -0.39
SLIRP-201ENST00000238688 CLPTM1LQ96KA5 538 aa12.62□□□□□ -0.39
SLIRP-201ENST00000238688 TEX37Q96LM6 180 aa12.62□□□□□ -0.39
SLIRP-201ENST00000238688 OR52E6Q96RD3 313 aa12.62□□□□□ -0.39
SLIRP-201ENST00000238688 CGREF1Q99674 301 aa12.62□□□□□ -0.39
SLIRP-201ENST00000238688 MS4A8Q9BY19 250 aa12.62□□□□□ -0.39
SLIRP-201ENST00000238688 TMEM168Q9H0V1 697 aa12.62□□□□□ -0.39
SLIRP-201ENST00000238688 CCDC86Q9H6F5 360 aaKnown RBP12.62□□□□□ -0.39
SLIRP-201ENST00000238688 MRPS30Q9NP92 439 aaKnown RBP12.62□□□□□ -0.39
SLIRP-201ENST00000238688 C6orf203Q9P0P8 240 aaPredicted RBP12.62□□□□□ -0.39
SLIRP-201ENST00000238688 ACTR3BQ9P1U1 418 aa12.62□□□□□ -0.39
SLIRP-201ENST00000238688 KLF15Q9UIH9 416 aa12.62□□□□□ -0.39
SLIRP-201ENST00000238688 PNMA8BQ9ULN7 279 aaPredicted RBP12.62□□□□□ -0.39
SLIRP-201ENST00000238688 DLGAP4Q9Y2H0 992 aa12.62□□□□□ -0.39
SLIRP-201ENST00000238688 U3KQA8 63 aa12.62□□□□□ -0.39
SLIRP-201ENST00000238688 PTPRQQ9UMZ3 2332 aa12.62□□□□□ -0.39
SLIRP-201ENST00000238688 SNRNP200O75643 2136 aaKnown RBP12.61□□□□□ -0.39
SLIRP-201ENST00000238688 ASPDHA6ND91 283 aa12.61□□□□□ -0.39
SLIRP-201ENST00000238688 ACOT8O14734 319 aa12.61□□□□□ -0.39
SLIRP-201ENST00000238688 SCAMP2O15127 329 aaKnown RBP12.61□□□□□ -0.39
SLIRP-201ENST00000238688 PCDH7O60245 1069 aa12.61□□□□□ -0.39
SLIRP-201ENST00000238688 GUCY1B2O75343 617 aa12.61□□□□□ -0.39
SLIRP-201ENST00000238688 PDE5AO76074 875 aa12.61□□□□□ -0.39
SLIRP-201ENST00000238688 VIPP01282 170 aa12.61□□□□□ -0.39
SLIRP-201ENST00000238688 C8BP07358 591 aa12.61□□□□□ -0.39
SLIRP-201ENST00000238688 ANXA4P09525 319 aaPredicted RBP12.61□□□□□ -0.39
SLIRP-201ENST00000238688 ZCCHC18P0CG32 403 aa12.61□□□□□ -0.39
SLIRP-201ENST00000238688 CTSEP14091 401 aa12.61□□□□□ -0.39
SLIRP-201ENST00000238688 CKMT2P17540 419 aa12.61□□□□□ -0.39
SLIRP-201ENST00000238688 ACP1P24666 158 aa12.61□□□□□ -0.39
SLIRP-201ENST00000238688 NME5P56597 212 aa12.61□□□□□ -0.39
SLIRP-201ENST00000238688 RPS15AP62244 130 aaKnown RBP12.61□□□□□ -0.39
SLIRP-201ENST00000238688 RPS13P62277 151 aaKnown RBP12.61□□□□□ -0.39
SLIRP-201ENST00000238688 UBE2IP63279 158 aaKnown RBP12.61□□□□□ -0.39
SLIRP-201ENST00000238688 EIF2B5Q13144 721 aaKnown RBP12.61□□□□□ -0.39
SLIRP-201ENST00000238688 DDX39BQ13838 428 aaKnown RBP12.61□□□□□ -0.39
SLIRP-201ENST00000238688 RCN1Q15293 331 aa12.61□□□□□ -0.39
SLIRP-201ENST00000238688 ZNF542PQ5EBM4 170 aa12.61□□□□□ -0.39
SLIRP-201ENST00000238688 KHDRBS2Q5VWX1 349 aaKnown RBP12.61□□□□□ -0.39
SLIRP-201ENST00000238688 LCN8Q6JVE9 175 aa12.61□□□□□ -0.39
SLIRP-201ENST00000238688 DLEU7Q6UYE1 221 aa12.61□□□□□ -0.39
SLIRP-201ENST00000238688 GKN2Q86XP6 184 aa12.61□□□□□ -0.39
SLIRP-201ENST00000238688 C1orf52Q8N6N3 182 aaKnown RBP12.61□□□□□ -0.39
SLIRP-201ENST00000238688 OR2L3Q8NG85 312 aa12.61□□□□□ -0.39
SLIRP-201ENST00000238688 OR52E4Q8NGH9 312 aa12.61□□□□□ -0.39
SLIRP-201ENST00000238688 OR4C6Q8NH72 309 aa12.61□□□□□ -0.39
SLIRP-201ENST00000238688 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.61□□□□□ -0.39
SLIRP-201ENST00000238688 TSACCQ96A04 125 aaPredicted RBP12.61□□□□□ -0.39
SLIRP-201ENST00000238688 TMEM125Q96AQ2 219 aa12.61□□□□□ -0.39
SLIRP-201ENST00000238688 VPS33AQ96AX1 596 aa12.61□□□□□ -0.39
SLIRP-201ENST00000238688 COQ8BQ96D53 544 aa12.61□□□□□ -0.39
SLIRP-201ENST00000238688 MTFMTQ96DP5 389 aaKnown RBP12.61□□□□□ -0.39
SLIRP-201ENST00000238688 CCDC115Q96NT0 180 aa12.61□□□□□ -0.39
SLIRP-201ENST00000238688 IL17FQ96PD4 163 aa12.61□□□□□ -0.39
SLIRP-201ENST00000238688 BHLHE41Q9C0J9 482 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms