RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 C1QTNF3Q9BXJ4 246 aa13.64□□□□□ -0.23
PCDHB3-201ENST00000231130 KCNH6Q9H252 994 aa13.64□□□□□ -0.23
PCDHB3-201ENST00000231130 NMRK2Q9NPI5 230 aa13.64□□□□□ -0.23
PCDHB3-201ENST00000231130 CPNE7Q9UBL6 633 aa13.64□□□□□ -0.23
PCDHB3-201ENST00000231130 SCML1Q9UN30 329 aa13.64□□□□□ -0.23
PCDHB3-201ENST00000231130 DHRS7Q9Y394 339 aa13.64□□□□□ -0.23
PCDHB3-201ENST00000231130 TNFRSF11BO00300 401 aa13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 STK16O75716 305 aa13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 RPS5P46782 204 aaKnown RBP13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 RGS6P49758 472 aa13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 MRPS6P82932 125 aaKnown RBP13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 PCBP2Q15366 365 aaKnown RBP eCLIP13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 KLHL12Q53G59 568 aa13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 KIAA1841Q6NSI8 718 aa13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 METTL2BQ6P1Q9 378 aaKnown RBP13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 SLC46A3Q7Z3Q1 461 aa13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 ZNF280BQ86YH2 543 aa13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 ZNF683Q8IZ20 524 aa13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 OR4M2Q8NGB6 313 aa13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 TOE1Q96GM8 510 aaKnown RBP13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 TRIB3Q96RU7 358 aa13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 COPS8Q99627 209 aa13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 MAGIXQ9H6Y5 334 aa13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 VPS9D1Q9Y2B5 631 aa13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 CCL15-CCL14A0A0B4J2E2 113 aa13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 WASH4PA8MWX3 477 aa13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 TOR1AO14656 332 aa13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 EPOP01588 193 aa13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 ESR1P03372 595 aa13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 SSTR2P30874 369 aa13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 RPL9P32969 192 aaKnown RBP13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 SMSP52788 366 aa13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 CTAG1AP78358 180 aa13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 SPIBQ01892 262 aa13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 MGAT3Q09327 533 aa13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 GPR19Q15760 415 aa13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 CCL15Q16663 113 aa13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 BRAT1Q6PJG6 821 aa13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 ANKS3Q6ZW76 656 aa13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 IPCEF1Q8WWN9 437 aaPredicted RBP13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 CD244Q9BZW8 370 aa13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 PADI3Q9ULW8 664 aa13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 FCF1Q9Y324 198 aaKnown RBP13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 DOCK3Q8IZD9 2030 aa13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 MYO10Q9HD67 2058 aa13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 OR5K3A6NET4 321 aa13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 HOXD9P28356 352 aaPredicted RBP13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 SLC6A4P31645 630 aa13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 FEN1P39748 380 aaKnown RBP13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 SOX3P41225 446 aa13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 PTGER3P43115 390 aa13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 CXCR4P61073 352 aa13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 VEPH1Q14D04 833 aa13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 ANKRD54Q6NXT1 300 aa13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 NLGN4YQ8NFZ3 816 aaPredicted RBP13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 CLEC4MQ9H2X3 399 aaPredicted RBP13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 GALNT9Q9HCQ5 603 aa13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 GKN1Q9NS71 199 aa13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 SH3BP4Q9P0V3 963 aa13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 CRLS1Q9UJA2 301 aa13.63□□□□□ -0.23
PCDHB3-201ENST00000231130 PIKFYVEQ9Y2I7 2098 aa13.62□□□□□ -0.23
PCDHB3-201ENST00000231130 J3KTA2 159 aa13.62□□□□□ -0.23
PCDHB3-201ENST00000231130 CLDN9O95484 217 aa13.62□□□□□ -0.23
PCDHB3-201ENST00000231130 RHOCP08134 193 aa13.62□□□□□ -0.23
PCDHB3-201ENST00000231130 SDC1P18827 310 aa13.62□□□□□ -0.23
PCDHB3-201ENST00000231130 CD72P21854 359 aa13.62□□□□□ -0.23
PCDHB3-201ENST00000231130 TALDO1P37837 337 aa13.62□□□□□ -0.23
PCDHB3-201ENST00000231130 CRATP43155 626 aa13.62□□□□□ -0.23
PCDHB3-201ENST00000231130 ETV1P50549 477 aa13.62□□□□□ -0.23
PCDHB3-201ENST00000231130 SNAPC1Q16533 368 aa13.62□□□□□ -0.23
PCDHB3-201ENST00000231130 CCDC149Q6ZUS6 474 aa13.62□□□□□ -0.23
PCDHB3-201ENST00000231130 SETD6Q8TBK2 473 aa13.62□□□□□ -0.23
PCDHB3-201ENST00000231130 NIPSNAP1Q9BPW8 284 aa13.62□□□□□ -0.23
PCDHB3-201ENST00000231130 CCM2Q9BSQ5 444 aa13.62□□□□□ -0.23
PCDHB3-201ENST00000231130 RPS6KA6Q9UK32 745 aa13.62□□□□□ -0.23
PCDHB3-201ENST00000231130 CLCA1A8K7I4 914 aa13.62□□□□□ -0.23
PCDHB3-201ENST00000231130 MAGEB17A8MXT2 336 aa13.62□□□□□ -0.23
PCDHB3-201ENST00000231130 TEX46H3BTG2 121 aa13.62□□□□□ -0.23
PCDHB3-201ENST00000231130 SUV39H1O43463 412 aa13.62□□□□□ -0.23
PCDHB3-201ENST00000231130 B4GALT3O60512 393 aa13.62□□□□□ -0.23
PCDHB3-201ENST00000231130 AP2A2O94973 939 aa13.62□□□□□ -0.23
PCDHB3-201ENST00000231130 KIR2DL3P43628 341 aa13.62□□□□□ -0.23
PCDHB3-201ENST00000231130 C10orf62Q5T681 223 aaPredicted RBP13.62□□□□□ -0.23
PCDHB3-201ENST00000231130 ZNF57Q68EA5 555 aaPredicted RBP13.62□□□□□ -0.23
PCDHB3-201ENST00000231130 OTOP2Q7RTS6 562 aa13.62□□□□□ -0.23
PCDHB3-201ENST00000231130 SLC34A3Q8N130 599 aa13.62□□□□□ -0.23
PCDHB3-201ENST00000231130 GPR156Q8NFN8 814 aa13.62□□□□□ -0.23
PCDHB3-201ENST00000231130 FCGR1BQ92637 280 aa13.62□□□□□ -0.23
PCDHB3-201ENST00000231130 MGLLQ99685 303 aa13.62□□□□□ -0.23
PCDHB3-201ENST00000231130 ADGRE3Q9BY15 652 aa13.62□□□□□ -0.23
PCDHB3-201ENST00000231130 CDCP1Q9H5V8 836 aa13.62□□□□□ -0.23
PCDHB3-201ENST00000231130 GRXCR2A6NFK2 248 aa13.62□□□□□ -0.23
PCDHB3-201ENST00000231130 WASHC1A8K0Z3 465 aa13.62□□□□□ -0.23
PCDHB3-201ENST00000231130 KCNK5O95279 499 aa13.62□□□□□ -0.23
PCDHB3-201ENST00000231130 C9P02748 559 aa13.62□□□□□ -0.23
PCDHB3-201ENST00000231130 GBAP04062 536 aa13.62□□□□□ -0.23
PCDHB3-201ENST00000231130 ZNF7P17097 686 aaPredicted RBP13.62□□□□□ -0.23
PCDHB3-201ENST00000231130 RPIAP49247 311 aa13.62□□□□□ -0.23
PCDHB3-201ENST00000231130 FAM180BQ6P0A1 224 aa13.62□□□□□ -0.23
PCDHB3-201ENST00000231130 B3GNT7Q8NFL0 401 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms