RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 CHST10O43529 356 aa11.98□□□□□ -0.49
LSM5-201ENST00000223084 DLX3O60479 287 aa11.98□□□□□ -0.49
LSM5-201ENST00000223084 CLEC3AO75596 197 aa11.98□□□□□ -0.49
LSM5-201ENST00000223084 CDC123O75794 336 aaPredicted RBP11.98□□□□□ -0.49
LSM5-201ENST00000223084 IGHEP01854 428 aa11.98□□□□□ -0.49
LSM5-201ENST00000223084 PDGFAP04085 211 aa11.98□□□□□ -0.49
LSM5-201ENST00000223084 PIK3CGP48736 1102 aa11.98□□□□□ -0.49
LSM5-201ENST00000223084 PLA2G16P53816 162 aa11.98□□□□□ -0.49
LSM5-201ENST00000223084 RRADP55042 308 aa11.98□□□□□ -0.49
LSM5-201ENST00000223084 STXBP1P61764 594 aaKnown RBP11.98□□□□□ -0.49
LSM5-201ENST00000223084 PCDH1Q08174 1060 aa11.98□□□□□ -0.49
LSM5-201ENST00000223084 DDX39BQ13838 428 aaKnown RBP11.98□□□□□ -0.49
LSM5-201ENST00000223084 MINDY4Q4G0A6 757 aa11.98□□□□□ -0.49
LSM5-201ENST00000223084 FAM219BQ5XKK7 198 aa11.98□□□□□ -0.49
LSM5-201ENST00000223084 GRHL2Q6ISB3 625 aa11.98□□□□□ -0.49
LSM5-201ENST00000223084 MED27Q6P2C8 311 aa11.98□□□□□ -0.49
LSM5-201ENST00000223084 SH2D5Q6ZV89 423 aa11.98□□□□□ -0.49
LSM5-201ENST00000223084 PTRH1Q86Y79 214 aaKnown RBP11.98□□□□□ -0.49
LSM5-201ENST00000223084 OR7G3Q8NG95 312 aa11.98□□□□□ -0.49
LSM5-201ENST00000223084 OR11G2Q8NGC1 345 aa11.98□□□□□ -0.49
LSM5-201ENST00000223084 C9orf43Q8TAL5 461 aaPredicted RBP11.98□□□□□ -0.49
LSM5-201ENST00000223084 ZNF473Q8WTR7 871 aaKnown RBP11.98□□□□□ -0.49
LSM5-201ENST00000223084 GAL3ST3Q96A11 431 aa11.98□□□□□ -0.49
LSM5-201ENST00000223084 MS4A6EQ96DS6 147 aa11.98□□□□□ -0.49
LSM5-201ENST00000223084 FER1L6-AS2Q96M78 137 aa11.98□□□□□ -0.49
LSM5-201ENST00000223084 IP6K3Q96PC2 410 aa11.98□□□□□ -0.49
LSM5-201ENST00000223084 CDK15Q96Q40 435 aa11.98□□□□□ -0.49
LSM5-201ENST00000223084 F2RL3Q96RI0 385 aa11.98□□□□□ -0.49
LSM5-201ENST00000223084 VN1R1Q9GZP7 353 aa11.98□□□□□ -0.49
LSM5-201ENST00000223084 RHBGQ9H310 441 aa11.98□□□□□ -0.49
LSM5-201ENST00000223084 C12orf65Q9H3J6 166 aaKnown RBP11.98□□□□□ -0.49
LSM5-201ENST00000223084 NOL11Q9H8H0 719 aaKnown RBP11.98□□□□□ -0.49
LSM5-201ENST00000223084 ACTR8Q9H981 624 aa11.98□□□□□ -0.49
LSM5-201ENST00000223084 PPCSQ9HAB8 311 aa11.98□□□□□ -0.49
LSM5-201ENST00000223084 ZBTB26Q9HCK0 441 aa11.98□□□□□ -0.49
LSM5-201ENST00000223084 TUBD1Q9UJT1 453 aa11.98□□□□□ -0.49
LSM5-201ENST00000223084 RAB21Q9UL25 225 aa11.98□□□□□ -0.49
LSM5-201ENST00000223084 EMCNQ9ULC0 261 aa11.98□□□□□ -0.49
LSM5-201ENST00000223084 TMCO1Q9UM00 188 aa11.98□□□□□ -0.49
LSM5-201ENST00000223084 TP53TG5Q9Y2B4 290 aa11.98□□□□□ -0.49
LSM5-201ENST00000223084 RNF11Q9Y3C5 154 aa11.98□□□□□ -0.49
LSM5-201ENST00000223084 CNTRLQ7Z7A1 2325 aa11.98□□□□□ -0.49
LSM5-201ENST00000223084 BOD1L1Q8NFC6 3051 aa11.97□□□□□ -0.49
LSM5-201ENST00000223084 KALRNO60229 2985 aa11.97□□□□□ -0.49
LSM5-201ENST00000223084 FAM227AF5H4B4 570 aa11.97□□□□□ -0.49
LSM5-201ENST00000223084 PPP6CO00743 305 aa11.97□□□□□ -0.49
LSM5-201ENST00000223084 CDH16O75309 829 aa11.97□□□□□ -0.49
LSM5-201ENST00000223084 TGFB1P01137 390 aa11.97□□□□□ -0.49
LSM5-201ENST00000223084 NUDT17P0C025 328 aa11.97□□□□□ -0.49
LSM5-201ENST00000223084 SFTPCP11686 197 aa11.97□□□□□ -0.49
LSM5-201ENST00000223084 TSPAN8P19075 237 aa11.97□□□□□ -0.49
LSM5-201ENST00000223084 GSTM2P28161 218 aa11.97□□□□□ -0.49
LSM5-201ENST00000223084 ARL1P40616 181 aaPredicted RBP11.97□□□□□ -0.49
LSM5-201ENST00000223084 CDH13P55290 713 aa11.97□□□□□ -0.49
LSM5-201ENST00000223084 EEF1A2Q05639 463 aaKnown RBP11.97□□□□□ -0.49
LSM5-201ENST00000223084 CPSF6Q16630 551 aaKnown RBP eCLIP11.97□□□□□ -0.49
LSM5-201ENST00000223084 LACTB2Q53H82 288 aaPredicted RBP11.97□□□□□ -0.49
LSM5-201ENST00000223084 COLEC12Q5KU26 742 aa11.97□□□□□ -0.49
LSM5-201ENST00000223084 LIPJQ5W064 366 aa11.97□□□□□ -0.49
LSM5-201ENST00000223084 METTL2BQ6P1Q9 378 aaKnown RBP11.97□□□□□ -0.49
LSM5-201ENST00000223084 UBE3DQ7Z6J8 389 aa11.97□□□□□ -0.49
LSM5-201ENST00000223084 PARP9Q8IXQ6 854 aa11.97□□□□□ -0.49
LSM5-201ENST00000223084 LAS2Q8IYD9 372 aa11.97□□□□□ -0.49
LSM5-201ENST00000223084 C4orf33Q8N1A6 199 aa11.97□□□□□ -0.49
LSM5-201ENST00000223084 FDCSPQ8NFU4 85 aa11.97□□□□□ -0.49
LSM5-201ENST00000223084 OR52B6Q8NGF0 335 aa11.97□□□□□ -0.49
LSM5-201ENST00000223084 ATP6V1E2Q96A05 226 aa11.97□□□□□ -0.49
LSM5-201ENST00000223084 SEC16BQ96JE7 1060 aa11.97□□□□□ -0.49
LSM5-201ENST00000223084 QRFPRQ96P65 431 aa11.97□□□□□ -0.49
LSM5-201ENST00000223084 SLC25A23Q9BV35 468 aa11.97□□□□□ -0.49
LSM5-201ENST00000223084 REXO4Q9GZR2 422 aaKnown RBP11.97□□□□□ -0.49
LSM5-201ENST00000223084 SEMA4BQ9NPR2 832 aaPredicted RBP11.97□□□□□ -0.49
LSM5-201ENST00000223084 LANCL2Q9NS86 450 aa11.97□□□□□ -0.49
LSM5-201ENST00000223084 DCDC2Q9UHG0 476 aa11.97□□□□□ -0.49
LSM5-201ENST00000223084 SMG1Q96Q15 3661 aaKnown RBP11.96□□□□□ -0.49
LSM5-201ENST00000223084 IGHV3-20A0A0C4DH32 117 aa11.96□□□□□ -0.49
LSM5-201ENST00000223084 A0A1B0GTL3 188 aa11.96□□□□□ -0.49
LSM5-201ENST00000223084 SAP18O00422 153 aaKnown RBP11.96□□□□□ -0.49
LSM5-201ENST00000223084 B4GALT2O60909 372 aa11.96□□□□□ -0.49
LSM5-201ENST00000223084 CEACAM4O75871 244 aa11.96□□□□□ -0.49
LSM5-201ENST00000223084 GSTA1P08263 222 aa11.96□□□□□ -0.49
LSM5-201ENST00000223084 RPS17P08708 135 aaKnown RBP11.96□□□□□ -0.49
LSM5-201ENST00000223084 ACPPP15309 386 aa11.96□□□□□ -0.49
LSM5-201ENST00000223084 TAC1P20366 129 aa11.96□□□□□ -0.49
LSM5-201ENST00000223084 NEK2P51955 445 aa11.96□□□□□ -0.49
LSM5-201ENST00000223084 CCNG1P51959 295 aa11.96□□□□□ -0.49
LSM5-201ENST00000223084 IFFO1Q0D2I5 559 aa11.96□□□□□ -0.49
LSM5-201ENST00000223084 Q0VFX4 171 aa11.96□□□□□ -0.49
LSM5-201ENST00000223084 RUNX2Q13950 521 aa11.96□□□□□ -0.49
LSM5-201ENST00000223084 RASA2Q15283 850 aa11.96□□□□□ -0.49
LSM5-201ENST00000223084 ADPRMQ3LIE5 342 aa11.96□□□□□ -0.49
LSM5-201ENST00000223084 TUBB8Q3ZCM7 444 aa11.96□□□□□ -0.49
LSM5-201ENST00000223084 UNC50Q53HI1 259 aa11.96□□□□□ -0.49
LSM5-201ENST00000223084 TCTN3Q6NUS6 607 aa11.96□□□□□ -0.49
LSM5-201ENST00000223084 LANCL3Q6ZV70 420 aa11.96□□□□□ -0.49
LSM5-201ENST00000223084 LCA5Q86VQ0 697 aa11.96□□□□□ -0.49
LSM5-201ENST00000223084 CA13Q8N1Q1 262 aa11.96□□□□□ -0.49
LSM5-201ENST00000223084 L3MBTL4Q8NA19 623 aa11.96□□□□□ -0.49
LSM5-201ENST00000223084 CLEC1AQ8NC01 280 aa11.96□□□□□ -0.49
LSM5-201ENST00000223084 OR2L5Q8NG80 312 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms