RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 MRNIPQ6NTE8 343 aa14.13□□□□□ -0.15
PTPRA-201ENST00000216877 PAQR6Q6TCH4 344 aa14.13□□□□□ -0.15
PTPRA-201ENST00000216877 GOLGA4Q13439 2230 aaKnown RBP14.13□□□□□ -0.15
PTPRA-201ENST00000216877 MOXD2PA6NHM9 499 aa14.12□□□□□ -0.15
PTPRA-201ENST00000216877 GATBO75879 557 aaKnown RBP14.12□□□□□ -0.15
PTPRA-201ENST00000216877 ATG12O94817 140 aa14.12□□□□□ -0.15
PTPRA-201ENST00000216877 SIX6O95475 246 aa14.12□□□□□ -0.15
PTPRA-201ENST00000216877 S1PR4O95977 384 aa14.12□□□□□ -0.15
PTPRA-201ENST00000216877 S100A9P06702 114 aaKnown RBP14.12□□□□□ -0.15
PTPRA-201ENST00000216877 CXCL3P19876 107 aa14.12□□□□□ -0.15
PTPRA-201ENST00000216877 HKDC1Q2TB90 917 aa14.12□□□□□ -0.15
PTPRA-201ENST00000216877 SLC10A6Q3KNW5 377 aa14.12□□□□□ -0.15
PTPRA-201ENST00000216877 CNTN4Q8IWV2 1026 aa14.12□□□□□ -0.15
PTPRA-201ENST00000216877 STPG2Q8N412 459 aa14.12□□□□□ -0.15
PTPRA-201ENST00000216877 OR9Q2Q8NGE9 314 aa14.12□□□□□ -0.15
PTPRA-201ENST00000216877 UFD1Q92890 307 aa14.12□□□□□ -0.15
PTPRA-201ENST00000216877 SLC29A3Q9BZD2 475 aa14.12□□□□□ -0.15
PTPRA-201ENST00000216877 ULBP1Q9BZM6 244 aa14.12□□□□□ -0.15
PTPRA-201ENST00000216877 SAP130Q9H0E3 1048 aa14.12□□□□□ -0.15
PTPRA-201ENST00000216877 TMEM161AQ9NX61 479 aa14.12□□□□□ -0.15
PTPRA-201ENST00000216877 RLFQ13129 1914 aa14.12□□□□□ -0.15
PTPRA-201ENST00000216877 IFRD1O00458 451 aaPredicted RBP14.12□□□□□ -0.15
PTPRA-201ENST00000216877 TO15178 435 aa14.12□□□□□ -0.15
PTPRA-201ENST00000216877 INPPL1O15357 1258 aa14.12□□□□□ -0.15
PTPRA-201ENST00000216877 NDUFS6O75380 124 aaKnown RBP14.12□□□□□ -0.15
PTPRA-201ENST00000216877 SOX14O95416 240 aa14.12□□□□□ -0.15
PTPRA-201ENST00000216877 HLA-DQB2P05538 268 aa14.12□□□□□ -0.15
PTPRA-201ENST00000216877 USP17L7P0C7H9 530 aa14.12□□□□□ -0.15
PTPRA-201ENST00000216877 GGT2P36268 569 aa14.12□□□□□ -0.15
PTPRA-201ENST00000216877 ACLYP53396 1101 aa14.12□□□□□ -0.15
PTPRA-201ENST00000216877 GANABQ14697 944 aaKnown RBP14.12□□□□□ -0.15
PTPRA-201ENST00000216877 NCF4Q15080 339 aa14.12□□□□□ -0.15
PTPRA-201ENST00000216877 FAM187BQ17R55 369 aa14.12□□□□□ -0.15
PTPRA-201ENST00000216877 BCDIN3DQ7Z5W3 292 aaKnown RBP14.12□□□□□ -0.15
PTPRA-201ENST00000216877 OR8D4Q8NGM9 314 aa14.12□□□□□ -0.15
PTPRA-201ENST00000216877 CIDECQ96AQ7 238 aaPredicted RBP14.12□□□□□ -0.15
PTPRA-201ENST00000216877 NXPE2Q96DL1 559 aa14.12□□□□□ -0.15
PTPRA-201ENST00000216877 CXorf58Q96LI9 332 aa14.12□□□□□ -0.15
PTPRA-201ENST00000216877 ERMAPQ96PL5 475 aaPredicted RBP14.12□□□□□ -0.15
PTPRA-201ENST00000216877 TCF25Q9BQ70 676 aa14.12□□□□□ -0.15
PTPRA-201ENST00000216877 CD244Q9BZW8 370 aa14.12□□□□□ -0.15
PTPRA-201ENST00000216877 BRINP2Q9C0B6 783 aa14.12□□□□□ -0.15
PTPRA-201ENST00000216877 TAS2R13Q9NYV9 303 aa14.12□□□□□ -0.15
PTPRA-201ENST00000216877 NRCAMQ92823 1304 aa14.12□□□□□ -0.15
PTPRA-201ENST00000216877 NFKBIEO00221 500 aa14.12□□□□□ -0.15
PTPRA-201ENST00000216877 MMP20O60882 483 aa14.12□□□□□ -0.15
PTPRA-201ENST00000216877 ESR1P03372 595 aa14.12□□□□□ -0.15
PTPRA-201ENST00000216877 RETP07949 1114 aa14.12□□□□□ -0.15
PTPRA-201ENST00000216877 MAOBP27338 520 aa14.12□□□□□ -0.15
PTPRA-201ENST00000216877 CLCNKAP51800 687 aa14.12□□□□□ -0.15
PTPRA-201ENST00000216877 TMEM88Q6PEY1 159 aa14.12□□□□□ -0.15
PTPRA-201ENST00000216877 ZFP82Q8N141 532 aa14.12□□□□□ -0.15
PTPRA-201ENST00000216877 OR13C4Q8NGS5 318 aa14.12□□□□□ -0.15
PTPRA-201ENST00000216877 NPAS1Q99742 590 aa14.12□□□□□ -0.15
PTPRA-201ENST00000216877 MIXL1Q9H2W2 232 aa14.12□□□□□ -0.15
PTPRA-201ENST00000216877 LATS2Q9NRM7 1088 aa14.12□□□□□ -0.15
PTPRA-201ENST00000216877 TRPM5Q9NZQ8 1165 aa14.12□□□□□ -0.15
PTPRA-201ENST00000216877 RHCGQ9UBD6 479 aa14.12□□□□□ -0.15
PTPRA-201ENST00000216877 ERVW-1Q9UQF0 538 aa14.12□□□□□ -0.15
PTPRA-201ENST00000216877 SBF1O95248 1867 aa14.11□□□□□ -0.15
PTPRA-201ENST00000216877 TTLL8A6PVC2 850 aa14.11□□□□□ -0.15
PTPRA-201ENST00000216877 MPC2O95563 127 aa14.11□□□□□ -0.15
PTPRA-201ENST00000216877 APOC1P02654 83 aa14.11□□□□□ -0.15
PTPRA-201ENST00000216877 ALPIP09923 528 aa14.11□□□□□ -0.15
PTPRA-201ENST00000216877 SRCP12931 536 aa14.11□□□□□ -0.15
PTPRA-201ENST00000216877 DRD5P21918 477 aa14.11□□□□□ -0.15
PTPRA-201ENST00000216877 GDF5P43026 501 aa14.11□□□□□ -0.15
PTPRA-201ENST00000216877 ALG1LQ6GMV1 187 aa14.11□□□□□ -0.15
PTPRA-201ENST00000216877 EFCAB12Q6NXP0 572 aa14.11□□□□□ -0.15
PTPRA-201ENST00000216877 CORO6Q6QEF8 472 aa14.11□□□□□ -0.15
PTPRA-201ENST00000216877 ATRAIDQ6UW56 229 aa14.11□□□□□ -0.15
PTPRA-201ENST00000216877 LGI4Q8N135 537 aa14.11□□□□□ -0.15
PTPRA-201ENST00000216877 HRASLS5Q96KN8 279 aa14.11□□□□□ -0.15
PTPRA-201ENST00000216877 PANX1Q96RD7 426 aa14.11□□□□□ -0.15
PTPRA-201ENST00000216877 TBC1D17Q9HA65 648 aa14.11□□□□□ -0.15
PTPRA-201ENST00000216877 NANSQ9NR45 359 aa14.11□□□□□ -0.15
PTPRA-201ENST00000216877 SEC14L4Q9UDX3 406 aa14.11□□□□□ -0.15
PTPRA-201ENST00000216877 RPS6KA6Q9UK32 745 aa14.11□□□□□ -0.15
PTPRA-201ENST00000216877 WDR90Q96KV7 1748 aa14.11□□□□□ -0.15
PTPRA-201ENST00000216877 NDUFA2O43678 99 aa14.11□□□□□ -0.15
PTPRA-201ENST00000216877 CHP2O43745 196 aa14.11□□□□□ -0.15
PTPRA-201ENST00000216877 KCNC3Q14003 757 aa14.11□□□□□ -0.15
PTPRA-201ENST00000216877 PTPRNQ16849 979 aa14.11□□□□□ -0.15
PTPRA-201ENST00000216877 MFSD14CQ5VZR4 134 aa14.11□□□□□ -0.15
PTPRA-201ENST00000216877 FBLIM1Q8WUP2 373 aa14.11□□□□□ -0.15
PTPRA-201ENST00000216877 RBP7Q96R05 134 aa14.11□□□□□ -0.15
PTPRA-201ENST00000216877 ARNT2Q9HBZ2 717 aa14.11□□□□□ -0.15
PTPRA-201ENST00000216877 CUEDC1Q9NWM3 386 aaPredicted RBP14.11□□□□□ -0.15
PTPRA-201ENST00000216877 GTF2IRD1Q9UHL9 959 aa14.11□□□□□ -0.15
PTPRA-201ENST00000216877 ZNF225Q9UK10 706 aa14.11□□□□□ -0.15
PTPRA-201ENST00000216877 C1QCP02747 245 aa14.11□□□□□ -0.15
PTPRA-201ENST00000216877 FNTBP49356 437 aa14.11□□□□□ -0.15
PTPRA-201ENST00000216877 ZXDBP98169 803 aa14.11□□□□□ -0.15
PTPRA-201ENST00000216877 BCL2L1Q07817 233 aa14.11□□□□□ -0.15
PTPRA-201ENST00000216877 LRRC74AQ0VAA2 488 aa14.11□□□□□ -0.15
PTPRA-201ENST00000216877 CPSF6Q16630 551 aaKnown RBP eCLIP14.11□□□□□ -0.15
PTPRA-201ENST00000216877 OTUD1Q5VV17 481 aaPredicted RBP14.11□□□□□ -0.15
PTPRA-201ENST00000216877 MTFR2Q6P444 385 aa14.11□□□□□ -0.15
PTPRA-201ENST00000216877 SAMD14Q8IZD0 417 aaPredicted RBP14.11□□□□□ -0.15
PTPRA-201ENST00000216877 OR4F6Q8NGB9 312 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms