RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 C12orf66Q96MD2 445 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 MYADMQ96S97 322 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 TIMM29Q9BSF4 260 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 PLA2G2FQ9BZM2 168 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 AMBRA1Q9C0C7 1298 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 RIBC2Q9H4K1 309 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 WASH6PQ9NQA3 447 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 MBNL1Q9NR56 388 aaKnown RBP7.91□□□□□ -1.14
VAMP3-201ENST00000054666 TM7SF3Q9NS93 570 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 TAS2R9Q9NYW1 312 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 MSRAQ9UJ68 235 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 HCN2Q9UL51 889 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 ANGPT4Q9Y264 503 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 SNX5Q9Y5X3 404 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 ANTXRLA6NF34 631 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 ABCB7O75027 752 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 CPNE6O95741 557 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 IFNA14P01570 189 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 C9P02748 559 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 DNTTP04053 509 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 NUDT7P0C024 238 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 SLC5A2P31639 672 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 TIE1P35590 1138 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 IL5RAQ01344 420 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 MC1RQ01726 317 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 ENPP2Q13822 863 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 SCARB2Q14108 478 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 ELOAQ14241 798 aaKnown RBP7.91□□□□□ -1.14
VAMP3-201ENST00000054666 RAB39AQ14964 217 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 HEPACAMQ14CZ8 416 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 SKIV2LQ15477 1246 aaKnown RBP7.91□□□□□ -1.14
VAMP3-201ENST00000054666 ZNF691Q5VV52 312 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 SDE2Q6IQ49 451 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 DUS1LQ6P1R4 473 aaKnown RBP7.91□□□□□ -1.14
VAMP3-201ENST00000054666 PIWIL3Q7Z3Z3 882 aaKnown RBP7.91□□□□□ -1.14
VAMP3-201ENST00000054666 VN1R5Q7Z5H4 357 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 NUDT13Q86X67 352 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 SLC30A8Q8IWU4 369 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 ATG16L2Q8NAA4 619 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 SPPL2AQ8TCT8 520 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 MAL2Q969L2 176 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 MRPL38Q96DV4 380 aaKnown RBP7.91□□□□□ -1.14
VAMP3-201ENST00000054666 FERD3LQ96RJ6 166 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 APOL4Q9BPW4 351 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 TUBA1CQ9BQE3 449 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 DOHHQ9BU89 302 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 MS4A8Q9BY19 250 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 NLNQ9BYT8 704 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 RHBGQ9H310 441 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 RMI1Q9H9A7 625 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 FBRSQ9HAH7 460 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 CXorf21Q9HAI6 301 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 NEUROD4Q9HD90 331 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 TIMMDC1Q9NPL8 285 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 IMP3Q9NV31 184 aaKnown RBP7.91□□□□□ -1.14
VAMP3-201ENST00000054666 THUMPD1Q9NXG2 353 aaKnown RBP7.91□□□□□ -1.14
VAMP3-201ENST00000054666 FBXL12Q9NXK8 326 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 VNN3Q9NY84 501 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 PDP1Q9P0J1 537 aaPredicted RBP7.91□□□□□ -1.14
VAMP3-201ENST00000054666 SERGEFQ9UGK8 458 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 TMEFF2Q9UIK5 374 aaPredicted RBP7.91□□□□□ -1.14
VAMP3-201ENST00000054666 MOSPD1Q9UJG1 213 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 ACSL6Q9UKU0 697 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 EXO1Q9UQ84 846 aaKnown RBP7.91□□□□□ -1.14
VAMP3-201ENST00000054666 ERVK-11Q9UQG0 969 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 WBP11Q9Y2W2 641 aaKnown RBP7.91□□□□□ -1.14
VAMP3-201ENST00000054666 PCDHGA8Q9Y5G5 932 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 PDZK1P1A8MUH7 402 aa7.9□□□□□ -1.14
VAMP3-201ENST00000054666 CACNB4O00305 520 aaPredicted RBP7.9□□□□□ -1.14
VAMP3-201ENST00000054666 PLPP1O14494 284 aa7.9□□□□□ -1.14
VAMP3-201ENST00000054666 ADAMDEC1O15204 470 aa7.9□□□□□ -1.14
VAMP3-201ENST00000054666 SLC16A6O15403 523 aa7.9□□□□□ -1.14
VAMP3-201ENST00000054666 CAPN5O15484 640 aaPredicted RBP7.9□□□□□ -1.14
VAMP3-201ENST00000054666 NDUFS4O43181 175 aa7.9□□□□□ -1.14
VAMP3-201ENST00000054666 KDM1AO60341 852 aa7.9□□□□□ -1.14
VAMP3-201ENST00000054666 DIRAS1O95057 198 aa7.9□□□□□ -1.14
VAMP3-201ENST00000054666 PAK4O96013 591 aaPredicted RBP7.9□□□□□ -1.14
VAMP3-201ENST00000054666 ETFAP13804 333 aa7.9□□□□□ -1.14
VAMP3-201ENST00000054666 DDCP20711 480 aa7.9□□□□□ -1.14
VAMP3-201ENST00000054666 CRHBPP24387 322 aa7.9□□□□□ -1.14
VAMP3-201ENST00000054666 PSMB5P28074 263 aa7.9□□□□□ -1.14
VAMP3-201ENST00000054666 TNFRSF4P43489 277 aa7.9□□□□□ -1.14
VAMP3-201ENST00000054666 GSTM5P46439 218 aa7.9□□□□□ -1.14
VAMP3-201ENST00000054666 SOX9P48436 509 aa7.9□□□□□ -1.14
VAMP3-201ENST00000054666 KEAP1Q14145 624 aa7.9□□□□□ -1.14
VAMP3-201ENST00000054666 C16orf72Q14CZ0 275 aa7.9□□□□□ -1.14
VAMP3-201ENST00000054666 RAB30Q15771 203 aa7.9□□□□□ -1.14
VAMP3-201ENST00000054666 ZNF630Q2M218 657 aaPredicted RBP7.9□□□□□ -1.14
VAMP3-201ENST00000054666 IFI44LQ53G44 452 aa7.9□□□□□ -1.14
VAMP3-201ENST00000054666 C6orf141Q5SZD1 244 aa7.9□□□□□ -1.14
VAMP3-201ENST00000054666 IER5LQ5T953 404 aa7.9□□□□□ -1.14
VAMP3-201ENST00000054666 DEPDC1Q5TB30 811 aa7.9□□□□□ -1.14
VAMP3-201ENST00000054666 SYCE2Q6PIF2 218 aa7.9□□□□□ -1.14
VAMP3-201ENST00000054666 PARM1Q6UWI2 310 aa7.9□□□□□ -1.14
VAMP3-201ENST00000054666 GALNT5Q7Z7M9 940 aa7.9□□□□□ -1.14
VAMP3-201ENST00000054666 NAGSQ8N159 534 aa7.9□□□□□ -1.14
VAMP3-201ENST00000054666 TP53I13Q8NBR0 393 aaPredicted RBP7.9□□□□□ -1.14
VAMP3-201ENST00000054666 CHDHQ8NE62 594 aaPredicted RBP7.9□□□□□ -1.14
VAMP3-201ENST00000054666 ABHD11Q8NFV4 315 aa7.9□□□□□ -1.14
VAMP3-201ENST00000054666 TTLQ8NG68 377 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms