RNA–Protein interactions for RNA: ENST00000011653.8

CD4-201, Transcript of CD4 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD4, Length 3,114 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-201ENST00000011653 UCKL1Q9NWZ5 548 aa10.13□□□□□ -0.79
CD4-201ENST00000011653 IFT80Q9P2H3 777 aaPredicted RBP10.13□□□□□ -0.79
CD4-201ENST00000011653 ACSL5Q9ULC5 683 aa10.13□□□□□ -0.79
CD4-201ENST00000011653 ZFHX2Q9C0A1 2572 aaPredicted RBP10.13□□□□□ -0.79
CD4-201ENST00000011653 ARID1BQ8NFD5 2236 aaPredicted RBP10.13□□□□□ -0.79
CD4-201ENST00000011653 A0A1W2PPW3 197 aa10.13□□□□□ -0.79
CD4-201ENST00000011653 ISM1B1AKI9 464 aa10.13□□□□□ -0.79
CD4-201ENST00000011653 KLK8O60259 260 aa10.13□□□□□ -0.79
CD4-201ENST00000011653 DEAF1O75398 565 aaPredicted RBP10.13□□□□□ -0.79
CD4-201ENST00000011653 VIPP01282 170 aa10.13□□□□□ -0.79
CD4-201ENST00000011653 PCNAP12004 261 aa10.13□□□□□ -0.79
CD4-201ENST00000011653 EEF1B2P24534 225 aaKnown RBP10.13□□□□□ -0.79
CD4-201ENST00000011653 HRH2P25021 359 aa10.13□□□□□ -0.79
CD4-201ENST00000011653 MAZP56270 477 aaKnown RBP10.13□□□□□ -0.79
CD4-201ENST00000011653 AP1S2P56377 157 aa10.13□□□□□ -0.79
CD4-201ENST00000011653 CYP4F2P78329 520 aa10.13□□□□□ -0.79
CD4-201ENST00000011653 OTUD3Q5T2D3 398 aaPredicted RBP10.13□□□□□ -0.79
CD4-201ENST00000011653 GLYATQ6IB77 296 aa10.13□□□□□ -0.79
CD4-201ENST00000011653 Q6ZNX1 250 aa10.13□□□□□ -0.79
CD4-201ENST00000011653 ZFAND4Q86XD8 727 aa10.13□□□□□ -0.79
CD4-201ENST00000011653 OR52E1Q8NGJ3 308 aa10.13□□□□□ -0.79
CD4-201ENST00000011653 CDC26Q8NHZ8 85 aa10.13□□□□□ -0.79
CD4-201ENST00000011653 ASB12Q8WXK4 309 aa10.13□□□□□ -0.79
CD4-201ENST00000011653 RNF31Q96EP0 1072 aa10.13□□□□□ -0.79
CD4-201ENST00000011653 CAMK1GQ96NX5 476 aa10.13□□□□□ -0.79
CD4-201ENST00000011653 TIMM29Q9BSF4 260 aa10.13□□□□□ -0.79
CD4-201ENST00000011653 ING2Q9H160 280 aa10.13□□□□□ -0.79
CD4-201ENST00000011653 SLAMF8Q9P0V8 285 aa10.13□□□□□ -0.79
CD4-201ENST00000011653 TMA7Q9Y2S6 64 aaKnown RBP10.13□□□□□ -0.79
CD4-201ENST00000011653 FANCMQ8IYD8 2048 aa10.12□□□□□ -0.79
CD4-201ENST00000011653 SPTBN2O15020 2390 aa10.12□□□□□ -0.79
CD4-201ENST00000011653 GMNNO75496 209 aa10.12□□□□□ -0.79
CD4-201ENST00000011653 HNF4AP41235 474 aa10.12□□□□□ -0.79
CD4-201ENST00000011653 YAP1P46937 504 aaKnown RBP10.12□□□□□ -0.79
CD4-201ENST00000011653 PNLIPRP1P54315 467 aa10.12□□□□□ -0.79
CD4-201ENST00000011653 OR4D2P58180 307 aa10.12□□□□□ -0.79
CD4-201ENST00000011653 TAP2Q03519 686 aa10.12□□□□□ -0.79
CD4-201ENST00000011653 WDR45BQ5MNZ6 344 aa10.12□□□□□ -0.79
CD4-201ENST00000011653 C6orf136Q5SQH8 315 aa10.12□□□□□ -0.79
CD4-201ENST00000011653 ALKBH2Q6NS38 261 aa10.12□□□□□ -0.79
CD4-201ENST00000011653 MAML2Q8IZL2 1156 aaPredicted RBP10.12□□□□□ -0.79
CD4-201ENST00000011653 OXR1Q8N573 874 aa10.12□□□□□ -0.79
CD4-201ENST00000011653 DTWD2Q8NBA8 298 aa10.12□□□□□ -0.79
CD4-201ENST00000011653 ZNF740Q8NDX6 193 aa10.12□□□□□ -0.79
CD4-201ENST00000011653 OR2T11Q8NH01 316 aa10.12□□□□□ -0.79
CD4-201ENST00000011653 LCN9Q8WX39 176 aa10.12□□□□□ -0.79
CD4-201ENST00000011653 NEIL2Q969S2 332 aa10.12□□□□□ -0.79
CD4-201ENST00000011653 OR4K3Q96R72 315 aa10.12□□□□□ -0.79
CD4-201ENST00000011653 LRRC61Q9BV99 259 aa10.12□□□□□ -0.79
CD4-201ENST00000011653 OSBPL10Q9BXB5 764 aa10.12□□□□□ -0.79
CD4-201ENST00000011653 PAIP1Q9H074 479 aaKnown RBP10.12□□□□□ -0.79
CD4-201ENST00000011653 ZNF624Q9P2J8 865 aaPredicted RBP10.12□□□□□ -0.79
CD4-201ENST00000011653 USP22Q9UPT9 525 aa10.12□□□□□ -0.79
CD4-201ENST00000011653 PCDHB3Q9Y5E6 796 aa10.12□□□□□ -0.79
CD4-201ENST00000011653 R4GN57 208 aa10.12□□□□□ -0.79
CD4-201ENST00000011653 RP1P56715 2156 aa10.12□□□□□ -0.79
CD4-201ENST00000011653 CNOT1A5YKK6 2376 aaKnown RBP10.12□□□□□ -0.79
CD4-201ENST00000011653 GSAPA4D1B5 854 aa10.12□□□□□ -0.79
CD4-201ENST00000011653 SP140Q13342 867 aa10.12□□□□□ -0.79
CD4-201ENST00000011653 SF1Q15637 639 aaKnown RBP10.12□□□□□ -0.79
CD4-201ENST00000011653 ZNF829Q3KNS6 432 aaPredicted RBP10.12□□□□□ -0.79
CD4-201ENST00000011653 ZNF658BQ4V348 819 aaPredicted RBP10.12□□□□□ -0.79
CD4-201ENST00000011653 TMEM214Q6NUQ4 689 aaKnown RBP10.12□□□□□ -0.79
CD4-201ENST00000011653 ZNF773Q6PK81 442 aa10.12□□□□□ -0.79
CD4-201ENST00000011653 SLC2A7Q6PXP3 512 aa10.12□□□□□ -0.79
CD4-201ENST00000011653 NRROSQ86YC3 692 aa10.12□□□□□ -0.79
CD4-201ENST00000011653 SFRP1Q8N474 314 aa10.12□□□□□ -0.79
CD4-201ENST00000011653 DPP10Q8N608 796 aa10.12□□□□□ -0.79
CD4-201ENST00000011653 CADM4Q8NFZ8 388 aa10.12□□□□□ -0.79
CD4-201ENST00000011653 OR5K2Q8NHB8 316 aa10.12□□□□□ -0.79
CD4-201ENST00000011653 NRBF2Q96F24 287 aa10.12□□□□□ -0.79
CD4-201ENST00000011653 CNDP2Q96KP4 475 aaKnown RBP10.12□□□□□ -0.79
CD4-201ENST00000011653 ZNF382Q96SR6 550 aa10.12□□□□□ -0.79
CD4-201ENST00000011653 RDH14Q9HBH5 336 aa10.12□□□□□ -0.79
CD4-201ENST00000011653 CCDC177Q9NQR7 707 aaPredicted RBP10.12□□□□□ -0.79
CD4-201ENST00000011653 GMEB2Q9UKD1 530 aa10.12□□□□□ -0.79
CD4-201ENST00000011653 SNX11Q9Y5W9 270 aa10.12□□□□□ -0.79
CD4-201ENST00000011653 H7BY64 318 aa10.11□□□□□ -0.79
CD4-201ENST00000011653 SAP18O00422 153 aaKnown RBP10.11□□□□□ -0.79
CD4-201ENST00000011653 PRAMEF4O60810 478 aa10.11□□□□□ -0.79
CD4-201ENST00000011653 CPNE6O95741 557 aa10.11□□□□□ -0.79
CD4-201ENST00000011653 OTCP00480 354 aa10.11□□□□□ -0.79
CD4-201ENST00000011653 POLR2CP19387 275 aaPredicted RBP10.11□□□□□ -0.79
CD4-201ENST00000011653 IL12AP29459 219 aa10.11□□□□□ -0.79
CD4-201ENST00000011653 ALDH3A2P51648 485 aa10.11□□□□□ -0.79
CD4-201ENST00000011653 ARSFP54793 590 aa10.11□□□□□ -0.79
CD4-201ENST00000011653 RAB15P59190 212 aa10.11□□□□□ -0.79
CD4-201ENST00000011653 TRAF3Q13114 568 aa10.11□□□□□ -0.79
CD4-201ENST00000011653 SIM2Q14190 667 aaPredicted RBP10.11□□□□□ -0.79
CD4-201ENST00000011653 PCBP2Q15366 365 aaKnown RBP eCLIP10.11□□□□□ -0.792e-6■■■■■ 30.7
CD4-201ENST00000011653 FAM98BQ52LJ0 330 aaKnown RBP10.11□□□□□ -0.79
CD4-201ENST00000011653 FGD3Q5JSP0 725 aa10.11□□□□□ -0.79
CD4-201ENST00000011653 BROXQ5VW32 411 aa10.11□□□□□ -0.79
CD4-201ENST00000011653 PRAMEF9Q5VWM5 478 aa10.11□□□□□ -0.79
CD4-201ENST00000011653 CAPN13Q6MZZ7 669 aaPredicted RBP10.11□□□□□ -0.79
CD4-201ENST00000011653 NEK10Q6ZWH5 1172 aa10.11□□□□□ -0.79
CD4-201ENST00000011653 CLEC4FQ8N1N0 589 aa10.11□□□□□ -0.79
CD4-201ENST00000011653 TBC1D15Q8TC07 691 aa10.11□□□□□ -0.79
CD4-201ENST00000011653 PROKR1Q8TCW9 393 aa10.11□□□□□ -0.79
CD4-201ENST00000011653 SLC37A2Q8TED4 501 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms