RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 CRB2Q5IJ48 1285 aa9.98□□□□□ -0.81
NIPAL3-201ENST00000003912 LHX8Q68G74 356 aa9.98□□□□□ -0.81
NIPAL3-201ENST00000003912 MZT2BQ6NZ67 158 aa9.98□□□□□ -0.81
NIPAL3-201ENST00000003912 PNCKQ6P2M8 343 aa9.98□□□□□ -0.81
NIPAL3-201ENST00000003912 WASH2PQ6VEQ5 465 aa9.98□□□□□ -0.81
NIPAL3-201ENST00000003912 PAQR9Q6ZVX9 377 aa9.98□□□□□ -0.81
NIPAL3-201ENST00000003912 OR6C4Q8NGE1 309 aa9.98□□□□□ -0.81
NIPAL3-201ENST00000003912 WDR60Q8WVS4 1066 aa9.98□□□□□ -0.81
NIPAL3-201ENST00000003912 ARMC5Q96C12 935 aa9.98□□□□□ -0.81
NIPAL3-201ENST00000003912 TNRC6CQ9HCJ0 1690 aaKnown RBP9.98□□□□□ -0.81
NIPAL3-201ENST00000003912 NPIPA1Q9UND3 350 aa9.98□□□□□ -0.81
NIPAL3-201ENST00000003912 LRP5O75197 1615 aa9.98□□□□□ -0.81
NIPAL3-201ENST00000003912 MYH4Q9Y623 1939 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 PHIPQ8WWQ0 1821 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 DBTP11182 482 aaKnown RBP9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 DEFB133Q30KQ1 61 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 LPCAT4Q643R3 524 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 FAM156AQ8NDB6 213 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 OR10G2Q8NGC3 310 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 SLC22A8Q8TCC7 542 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 SLC39A13Q96H72 371 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 SLC12A9Q9BXP2 914 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 PELI2Q9HAT8 420 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 MAN2B2Q9Y2E5 1009 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 E7EQ34 232 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 CASKO14936 926 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 ANGPTL1O95841 491 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 SLC35E2BP0CK96 405 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 CDK3Q00526 305 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 PKDCCQ504Y2 493 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 KDELC1Q6UW63 502 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 GAREM2Q75VX8 874 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 NANOGNBQ7Z5D8 188 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 ZFAND4Q86XD8 727 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 CCDC116Q8IYX3 515 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 LRTOMTQ8WZ04 291 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 TRIM43Q96BQ3 446 aaPredicted RBP9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 BOCQ9BWV1 1114 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 TVP23BQ9NYZ1 205 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 WBP11Q9Y2W2 641 aaKnown RBP9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 IFT52Q9Y366 437 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 NOX1Q9Y5S8 564 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 M0QX08 132 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 EDIL3O43854 480 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 ZNF3P17036 446 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 RPL5P46777 297 aaKnown RBP9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 CLDN2P57739 230 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 KLHL22Q53GT1 634 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 RPS27LQ71UM5 84 aaKnown RBP9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 ZNF550Q7Z398 422 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 HSD11B1LQ7Z5J1 315 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 GALNT12Q8IXK2 581 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 LRRC25Q8N386 305 aaPredicted RBP9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 RELTQ969Z4 430 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 ZFYVE21Q9BQ24 234 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 RTP3Q9BQQ7 232 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 PHF7Q9BWX1 381 aaPredicted RBP9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 MRPL39Q9NYK5 338 aaKnown RBP9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 DKK3Q9UBP4 350 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 POMPQ9Y244 141 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 IRAK3Q9Y616 596 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 THSD7AQ9UPZ6 1657 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 BCAT2O15382 392 aaPredicted RBP9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 SYNGR4O95473 234 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 SERPINA3P01011 423 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 CXCL10P02778 98 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 IL3P08700 152 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 MOGSQ13724 837 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 IRF4Q15306 451 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 C6orf136Q5SQH8 315 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 OR4C11Q6IEV9 310 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 GPR150Q8NGU9 434 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 RLN3Q8WXF3 142 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 TMCO6Q96DC7 493 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 MPP4Q96JB8 637 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 PAIP1Q9H074 479 aaKnown RBP9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 FBRSL1Q9HCM7 1045 aaKnown RBP9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 GIN1Q9NXP7 522 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 RAB26Q9ULW5 256 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 PDE4DIPQ5VU43 2346 aa9.97□□□□□ -0.81
NIPAL3-201ENST00000003912 FAM92AA1XBS5 289 aa9.96□□□□□ -0.81
NIPAL3-201ENST00000003912 CPSF4LA6NMK7 179 aaKnown RBP9.96□□□□□ -0.81
NIPAL3-201ENST00000003912 EMC8O43402 210 aa9.96□□□□□ -0.81
NIPAL3-201ENST00000003912 LATO43561 262 aa9.96□□□□□ -0.81
NIPAL3-201ENST00000003912 BCAS2O75934 225 aaPredicted RBP9.96□□□□□ -0.81
NIPAL3-201ENST00000003912 OPN1SWP03999 348 aa9.96□□□□□ -0.81
NIPAL3-201ENST00000003912 ALDOAP04075 364 aaKnown RBP9.96□□□□□ -0.81
NIPAL3-201ENST00000003912 CD2P06729 351 aa9.96□□□□□ -0.81
NIPAL3-201ENST00000003912 GNALP38405 381 aa9.96□□□□□ -0.81
NIPAL3-201ENST00000003912 MNDAP41218 407 aa9.96□□□□□ -0.81
NIPAL3-201ENST00000003912 FCHO2Q0JRZ9 810 aa9.96□□□□□ -0.81
NIPAL3-201ENST00000003912 PLCXD2Q0VAA5 305 aa9.96□□□□□ -0.81
NIPAL3-201ENST00000003912 MYBPC3Q14896 1274 aa9.96□□□□□ -0.81
NIPAL3-201ENST00000003912 SPATS1Q496A3 300 aa9.96□□□□□ -0.81
NIPAL3-201ENST00000003912 REEP3Q6NUK4 255 aa9.96□□□□□ -0.81
NIPAL3-201ENST00000003912 BTN2A1Q7KYR7 527 aa9.96□□□□□ -0.81
NIPAL3-201ENST00000003912 RNF130Q86XS8 419 aa9.96□□□□□ -0.81
NIPAL3-201ENST00000003912 CEP97Q8IW35 865 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms