RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, human

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTTN-223	ENST00000640931	MARCH11	A6NNE9	402 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	ZNF99	A8MXY4	864 aa	Predicted RBP	7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	DFFA	O00273	331 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	SCAMP3	O14828	347 aa	Known RBP	7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	SOCS5	O75159	536 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	ACSM4	P0C7M7	580 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	CCNYL3	P0C7X3	344 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	NDUFB7	P17568	137 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	MAG	P20916	626 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	FGFR3	P22607	806 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	GPR3	P46089	330 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	CXCR3	P49682	368 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	ACTR1A	P61163	376 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	CEACAM7	Q14002	265 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	DSG2	Q14126	1118 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	VEPH1	Q14D04	833 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	TEAD4	Q15561	434 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	CTXN3	Q4LDR2	81 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	OR2B11	Q5JQS5	317 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	ADGRF1	Q5T601	910 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	SLC16A13	Q7RTY0	426 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	PID1	Q7Z2X4	250 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	NLRP8	Q86W28	1048 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	PLD3	Q8IV08	490 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	THEM5	Q8N1Q8	247 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	WDSUB1	Q8N9V3	476 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	CLHC1	Q8NHS4	586 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	SPATA22	Q8NHS9	363 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	PXYLP1	Q8TE99	480 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	CYGB	Q8WWM9	190 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	USP7	Q93009	1102 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	RFK	Q969G6	155 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	SLC25A36	Q96CQ1	311 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	SPATA13	Q96N96	652 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	FCRL3	Q96P31	734 aa	Predicted RBP	7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	FAM126A	Q9BYI3	521 aa	Predicted RBP	7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	NXF2	Q9GZY0	626 aa	Known RBP	7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	METTL9	Q9H1A3	318 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	OPA3	Q9H6K4	179 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	ZNF395	Q9H8N7	513 aa	Predicted RBP	7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	TREM2	Q9NZC2	230 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	PTTG3P	Q9NZH4	202 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	MYEF2	Q9P2K5	600 aa	Known RBP	7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	OPTC	Q9UBM4	332 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	CASP8AP2	Q9UKL3	1982 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	TCRBV3S1	A0A5B6	114 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	HMX2	A2RU54	273 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931		E9PAM4	449 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	SULT1C2	O00338	296 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	ZNF197	O14709	1029 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	AIM2	O14862	343 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	CBR3	O75828	277 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	CABYR	O75952	493 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	PTBP3	O95758	552 aa	Known RBP	7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	PLAT	P00750	562 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	JCHAIN	P01591	159 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	ITGAM	P11215	1152 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	GDI1	P31150	447 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	NUDT2	P50583	147 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	KLF10	Q13118	480 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	MAB21L1	Q13394	359 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	SMCO1	Q147U7	214 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	PAFAH1B3	Q15102	231 aa	Known RBP	7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	SEC23B	Q15437	767 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	ATP6AP1	Q15904	470 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	RFX4	Q33E94	735 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	CERCAM	Q5T4B2	595 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	CES4A	Q5XG92	561 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	KDM4D	Q6B0I6	523 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	NRARP	Q7Z6K4	114 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	ZNF781	Q8N8C0	355 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	ZNF557	Q8N988	423 aa	Predicted RBP	7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	HUS1B	Q8NHY5	278 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	ARNTL2	Q8WYA1	636 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	VWCE	Q96DN2	955 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	FAM193B	Q96PV7	902 aa	Predicted RBP	7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	ZNF300	Q96RE9	604 aa	Predicted RBP	7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	SEPT5	Q99719	369 aa	Predicted RBP	7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	TBCD	Q9BTW9	1192 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	VN1R3	Q9BXE9	311 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	REG4	Q9BYZ8	158 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	ANKRD19P	Q9H560	264 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	NOL11	Q9H8H0	719 aa	Known RBP	7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	PRDM5	Q9NQX1	630 aa	Predicted RBP	7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	ENTPD7	Q9NQZ7	604 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	NUDT15	Q9NV35	164 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	TMEM39A	Q9NV64	488 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	KLHL8	Q9P2G9	620 aa	Predicted RBP	7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	ASH2L	Q9UBL3	628 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	PCDHB7	Q9Y5E2	793 aa		7.69	□□□□□ -1.18
RTTN-223	ENST00000640931	TEX13C	A0A0J9YWL9	993 aa		7.68	□□□□□ -1.18
RTTN-223	ENST00000640931	RHPN2P1	A8MT19	583 aa		7.68	□□□□□ -1.18
RTTN-223	ENST00000640931		H3BQ06	376 aa	Predicted RBP	7.68	□□□□□ -1.18
RTTN-223	ENST00000640931	PHYH	O14832	338 aa		7.68	□□□□□ -1.18
RTTN-223	ENST00000640931	IRAK2	O43187	625 aa		7.68	□□□□□ -1.18
RTTN-223	ENST00000640931	UGDH	O60701	494 aa		7.68	□□□□□ -1.18
RTTN-223	ENST00000640931	XYLB	O75191	536 aa		7.68	□□□□□ -1.18
RTTN-223	ENST00000640931	CNTN5	O94779	1100 aa		7.68	□□□□□ -1.18
RTTN-223	ENST00000640931	PEX11B	O96011	259 aa		7.68	□□□□□ -1.18
RTTN-223	ENST00000640931	IGLV3-25	P01717	112 aa		7.68	□□□□□ -1.18

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