RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 ATAD3BQ5T9A4 648 aa15.91■□□□□ 0.14
HNRNPU-228ENST00000640306 DESI1Q6ICB0 168 aa15.91■□□□□ 0.14
HNRNPU-228ENST00000640306 AGTRAPQ6RW13 159 aa15.91■□□□□ 0.14
HNRNPU-228ENST00000640306 GPR155Q7Z3F1 870 aa15.91■□□□□ 0.14
HNRNPU-228ENST00000640306 TMPRSS11BQ86T26 416 aa15.91■□□□□ 0.14
HNRNPU-228ENST00000640306 PARP16Q8N5Y8 322 aa15.91■□□□□ 0.14
HNRNPU-228ENST00000640306 MINDY2Q8NBR6 621 aa15.91■□□□□ 0.14
HNRNPU-228ENST00000640306 C11orf65Q8NCR3 313 aa15.91■□□□□ 0.14
HNRNPU-228ENST00000640306 OR5M11Q96RB7 305 aa15.91■□□□□ 0.14
HNRNPU-228ENST00000640306 MTG2Q9H4K7 406 aa15.91■□□□□ 0.14
HNRNPU-228ENST00000640306 C14orf119Q9NWQ9 140 aa15.91■□□□□ 0.14
HNRNPU-228ENST00000640306 MS4A12Q9NXJ0 267 aa15.91■□□□□ 0.14
HNRNPU-228ENST00000640306 ZNF226Q9NYT6 803 aa15.91■□□□□ 0.14
HNRNPU-228ENST00000640306 SCN8AQ9UQD0 1980 aa15.91■□□□□ 0.14
HNRNPU-228ENST00000640306 PSMD11O00231 422 aa15.91■□□□□ 0.14
HNRNPU-228ENST00000640306 ABLIM3O94929 683 aa15.91■□□□□ 0.14
HNRNPU-228ENST00000640306 CDK1P06493 297 aa15.91■□□□□ 0.14
HNRNPU-228ENST00000640306 C22orf39Q6P5X5 142 aa15.91■□□□□ 0.14
HNRNPU-228ENST00000640306 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.91■□□□□ 0.14
HNRNPU-228ENST00000640306 EPYCQ99645 322 aa15.91■□□□□ 0.14
HNRNPU-228ENST00000640306 LSM7Q9UK45 103 aaKnown RBP15.91■□□□□ 0.14
HNRNPU-228ENST00000640306 ANAPC1Q9H1A4 1944 aa15.91■□□□□ 0.14
HNRNPU-228ENST00000640306 LINC00854A0A1B0GVQ3 168 aa15.9■□□□□ 0.14
HNRNPU-228ENST00000640306 C1orf226A1L170 272 aa15.9■□□□□ 0.14
HNRNPU-228ENST00000640306 TSPAN6O43657 245 aa15.9■□□□□ 0.14
HNRNPU-228ENST00000640306 PQBP1O60828 265 aaKnown RBP15.9■□□□□ 0.14
HNRNPU-228ENST00000640306 IDSP22304 550 aa15.9■□□□□ 0.14
HNRNPU-228ENST00000640306 S100A5P33763 92 aa15.9■□□□□ 0.14
HNRNPU-228ENST00000640306 MAPK8P45983 427 aa15.9■□□□□ 0.14
HNRNPU-228ENST00000640306 PCYT1AP49585 367 aa15.9■□□□□ 0.14
HNRNPU-228ENST00000640306 CTSCP53634 463 aa15.9■□□□□ 0.14
HNRNPU-228ENST00000640306 VEZF1Q14119 521 aa15.9■□□□□ 0.14
HNRNPU-228ENST00000640306 DOC2BQ14184 412 aa15.9■□□□□ 0.14
HNRNPU-228ENST00000640306 SYTL3Q4VX76 610 aa15.9■□□□□ 0.14
HNRNPU-228ENST00000640306 SLC46A3Q7Z3Q1 461 aa15.9■□□□□ 0.14
HNRNPU-228ENST00000640306 HSD11B1LQ7Z5J1 315 aa15.9■□□□□ 0.14
HNRNPU-228ENST00000640306 VPS37AQ8NEZ2 397 aa15.9■□□□□ 0.14
HNRNPU-228ENST00000640306 OR7G3Q8NG95 312 aa15.9■□□□□ 0.14
HNRNPU-228ENST00000640306 MYDGFQ969H8 173 aa15.9■□□□□ 0.14
HNRNPU-228ENST00000640306 TMEM175Q9BSA9 504 aa15.9■□□□□ 0.14
HNRNPU-228ENST00000640306 MMP27Q9H306 513 aa15.9■□□□□ 0.14
HNRNPU-228ENST00000640306 DOCK6Q96HP0 2047 aa15.9■□□□□ 0.14
HNRNPU-228ENST00000640306 CYP7B1O75881 506 aa15.9■□□□□ 0.14
HNRNPU-228ENST00000640306 RPLP0P05388 317 aaKnown RBP15.9■□□□□ 0.14
HNRNPU-228ENST00000640306 PDHA2P29803 388 aa15.9■□□□□ 0.14
HNRNPU-228ENST00000640306 PRIM2P49643 509 aa15.9■□□□□ 0.14
HNRNPU-228ENST00000640306 EPHB3P54753 998 aa15.9■□□□□ 0.14
HNRNPU-228ENST00000640306 SELENOWP63302 87 aa15.9■□□□□ 0.14
HNRNPU-228ENST00000640306 SF3B4Q15427 424 aaKnown RBP eCLIP15.9■□□□□ 0.142e-14■■■□□ 18.5
HNRNPU-228ENST00000640306 SLC44A2Q8IWA5 706 aaPredicted RBP15.9■□□□□ 0.14
HNRNPU-228ENST00000640306 AMER2Q8N7J2 671 aa15.9■□□□□ 0.14
HNRNPU-228ENST00000640306 GABARAPL3Q9BY60 117 aa15.9■□□□□ 0.14
HNRNPU-228ENST00000640306 SPATA6Q9NWH7 488 aaPredicted RBP15.9■□□□□ 0.14
HNRNPU-228ENST00000640306 BACE2Q9Y5Z0 518 aa15.9■□□□□ 0.14
HNRNPU-228ENST00000640306 CCDC88CQ9P219 2028 aa15.89■□□□□ 0.13
HNRNPU-228ENST00000640306 TGFB1P01137 390 aa15.89■□□□□ 0.13
HNRNPU-228ENST00000640306 HOXB6P17509 224 aaKnown RBP15.89■□□□□ 0.13
HNRNPU-228ENST00000640306 SOAT1P35610 550 aa15.89■□□□□ 0.13
HNRNPU-228ENST00000640306 TBCEQ15813 527 aaPredicted RBP15.89■□□□□ 0.13
HNRNPU-228ENST00000640306 MSANTD1Q6ZTZ1 278 aa15.89■□□□□ 0.13
HNRNPU-228ENST00000640306 USP43Q70EL4 1123 aa15.89■□□□□ 0.13
HNRNPU-228ENST00000640306 GAREM2Q75VX8 874 aa15.89■□□□□ 0.13
HNRNPU-228ENST00000640306 MMP21Q8N119 569 aa15.89■□□□□ 0.13
HNRNPU-228ENST00000640306 PGBD3Q8N328 593 aa15.89■□□□□ 0.13
HNRNPU-228ENST00000640306 CELF2-AS1Q8N7Q2 184 aa15.89■□□□□ 0.13
HNRNPU-228ENST00000640306 SLC35A5Q9BS91 424 aa15.89■□□□□ 0.13
HNRNPU-228ENST00000640306 CHST8Q9H2A9 424 aa15.89■□□□□ 0.13
HNRNPU-228ENST00000640306 STOX2Q9P2F5 926 aaPredicted RBP15.89■□□□□ 0.13
HNRNPU-228ENST00000640306 IGLV3-16A0A075B6K0 115 aa15.89■□□□□ 0.13
HNRNPU-228ENST00000640306 FEN1P39748 380 aaKnown RBP15.89■□□□□ 0.13
HNRNPU-228ENST00000640306 CSTF3Q12996 717 aaKnown RBP15.89■□□□□ 0.13
HNRNPU-228ENST00000640306 LIPJQ5W064 366 aa15.89■□□□□ 0.13
HNRNPU-228ENST00000640306 AKAP14Q86UN6 197 aa15.89■□□□□ 0.13
HNRNPU-228ENST00000640306 CYP4Z2PQ8N1L4 340 aa15.89■□□□□ 0.13
HNRNPU-228ENST00000640306 C2orf73Q8N5S3 287 aaPredicted RBP15.89■□□□□ 0.13
HNRNPU-228ENST00000640306 B3GNT7Q8NFL0 401 aa15.89■□□□□ 0.13
HNRNPU-228ENST00000640306 CAPSLQ8WWF8 208 aa15.89■□□□□ 0.13
HNRNPU-228ENST00000640306 ASZ1Q8WWH4 475 aa15.89■□□□□ 0.13
HNRNPU-228ENST00000640306 SORCS1Q8WY21 1168 aa15.89■□□□□ 0.13
HNRNPU-228ENST00000640306 CLP1Q92989 425 aaKnown RBP15.89■□□□□ 0.13
HNRNPU-228ENST00000640306 NEIL2Q969S2 332 aa15.89■□□□□ 0.13
HNRNPU-228ENST00000640306 IL4I1Q96RQ9 567 aa15.89■□□□□ 0.13
HNRNPU-228ENST00000640306 RIOK2Q9BVS4 552 aaKnown RBP15.89■□□□□ 0.13
HNRNPU-228ENST00000640306 OR51B5Q9H339 312 aa15.89■□□□□ 0.13
HNRNPU-228ENST00000640306 IL21Q9HBE4 155 aa15.89■□□□□ 0.13
HNRNPU-228ENST00000640306 EXOSC4Q9NPD3 245 aaKnown RBP15.89■□□□□ 0.13
HNRNPU-228ENST00000640306 ERVK13-1Q9NX77 482 aa15.89■□□□□ 0.13
HNRNPU-228ENST00000640306 RAB23Q9ULC3 237 aa15.89■□□□□ 0.13
HNRNPU-228ENST00000640306 EXO1Q9UQ84 846 aaKnown RBP15.89■□□□□ 0.13
HNRNPU-228ENST00000640306 PCDHGA2Q9Y5H1 932 aa15.89■□□□□ 0.13
HNRNPU-228ENST00000640306 INSL5Q9Y5Q6 135 aa15.89■□□□□ 0.13
HNRNPU-228ENST00000640306 A0A1W2PRU2 124 aa15.88■□□□□ 0.13
HNRNPU-228ENST00000640306 CTDSP2O14595 271 aa15.88■□□□□ 0.13
HNRNPU-228ENST00000640306 SGTAO43765 313 aa15.88■□□□□ 0.13
HNRNPU-228ENST00000640306 AP1S2P56377 157 aa15.88■□□□□ 0.13
HNRNPU-228ENST00000640306 MADCAM1Q13477 382 aa15.88■□□□□ 0.13
HNRNPU-228ENST00000640306 SCARB2Q14108 478 aa15.88■□□□□ 0.13
HNRNPU-228ENST00000640306 TSTQ16762 297 aaKnown RBP15.88■□□□□ 0.13
HNRNPU-228ENST00000640306 UAP1L1Q3KQV9 507 aa15.88■□□□□ 0.13
HNRNPU-228ENST00000640306 LEXMQ3ZCV2 418 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms