RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 E4F1Q66K89 784 aaPredicted RBP3.17□□□□□ -1.9
CCDC7-213ENST00000639290 KIAA0408Q6ZU52 694 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 HSCBQ8IWL3 235 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 OR52N2Q8NGI0 321 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 UHMK1Q8TAS1 419 aaKnown RBP3.17□□□□□ -1.9
CCDC7-213ENST00000639290 PHF21AQ96BD5 680 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 TMIGD2Q96BF3 282 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 C1orf74Q96LT6 269 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 C10orf90Q96M02 699 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 KREMEN1Q96MU8 473 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 NCAPGQ9BPX3 1015 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 GPR61Q9BZJ8 451 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 XPO4Q9C0E2 1151 aaKnown RBP3.17□□□□□ -1.9
CCDC7-213ENST00000639290 PRDM14Q9GZV8 571 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 SDCBP2Q9H190 292 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 CCDC68Q9H2F9 335 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 MS4A5Q9H3V2 200 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 GPATCH2Q9NW75 528 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 FRRS1LQ9P0K9 344 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 PLCL2Q9UPR0 1127 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 RNF115Q9Y4L5 304 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 SNX5Q9Y5X3 404 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 FKBP7Q9Y680 259 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 FCHO1O14526 889 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 KMOO15229 486 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 HEXIM1O94992 359 aaKnown RBP3.17□□□□□ -1.9
CCDC7-213ENST00000639290 BAG2O95816 211 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 THBDP07204 575 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 CTSBP07858 339 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 ZGLP1P0C6A0 271 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 RBMY1A1P0DJD3 496 aaKnown RBP3.17□□□□□ -1.9
CCDC7-213ENST00000639290 MTHFD2P13995 350 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 CD40P25942 277 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 MYL6P60660 151 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 PPP1CAP62136 330 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 PLOD1Q02809 727 aaPredicted RBP3.17□□□□□ -1.9
CCDC7-213ENST00000639290 RUNX2Q13950 521 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 NFYCQ13952 458 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 SPARCL1Q14515 664 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 SLC14A2Q15849 920 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 PFKFB4Q16877 469 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 MPEG1Q2M385 716 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 DPY19L1Q2PZI1 675 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 TOR1AIP1Q5JTV8 583 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 TCTE1Q5JU00 501 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 ACAD10Q6JQN1 1059 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 TRIM65Q6PJ69 517 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 CDHR3Q6ZTQ4 885 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 C8orf86Q6ZUL3 223 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 ENOSF1Q7L5Y1 443 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 LRRTM4Q86VH4 590 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 CDKL3Q8IVW4 592 aaPredicted RBP3.17□□□□□ -1.9
CCDC7-213ENST00000639290 C12orf29Q8N999 325 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 EXD1Q8NHP7 514 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 FAM110DQ8TAY7 271 aaPredicted RBP3.17□□□□□ -1.9
CCDC7-213ENST00000639290 RILPL2Q969X0 211 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 HSFY1Q96LI6 401 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 KCTD10Q9H3F6 313 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 UGT1A8Q9HAW9 530 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 KCNK13Q9HB14 408 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 POLD4Q9HCU8 107 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 ACKR4Q9NPB9 350 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 MRGBPQ9NV56 204 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 ARGLU1Q9NWB6 273 aaPredicted RBP3.17□□□□□ -1.9
CCDC7-213ENST00000639290 AASSQ9UDR5 926 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 GIMAP2Q9UG22 337 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 HPCAL4Q9UM19 191 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 B3GALT5Q9Y2C3 310 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 SIK3Q9Y2K2 1263 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 EXPH5Q8NEV8 1989 aa3.17□□□□□ -1.9
CCDC7-213ENST00000639290 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.16□□□□□ -1.9
CCDC7-213ENST00000639290 FITM1A5D6W6 292 aa3.16□□□□□ -1.9
CCDC7-213ENST00000639290 RGSL1A5PLK6 1076 aa3.16□□□□□ -1.9
CCDC7-213ENST00000639290 TTC36A6NLP5 189 aa3.16□□□□□ -1.9
CCDC7-213ENST00000639290 C16orf97H3BN30 126 aa3.16□□□□□ -1.9
CCDC7-213ENST00000639290 RCBTB2O95199 551 aa3.16□□□□□ -1.9
CCDC7-213ENST00000639290 TUBB4AP04350 444 aa3.16□□□□□ -1.9
CCDC7-213ENST00000639290 ATP1A3P13637 1013 aa3.16□□□□□ -1.9
CCDC7-213ENST00000639290 ACP5P13686 325 aa3.16□□□□□ -1.9
CCDC7-213ENST00000639290 SELEP16581 610 aa3.16□□□□□ -1.9
CCDC7-213ENST00000639290 CHMP24386 653 aa3.16□□□□□ -1.9
CCDC7-213ENST00000639290 GIFP27352 417 aa3.16□□□□□ -1.9
CCDC7-213ENST00000639290 SERPINA4P29622 427 aa3.16□□□□□ -1.9
CCDC7-213ENST00000639290 UGT2B10P36537 528 aa3.16□□□□□ -1.9
CCDC7-213ENST00000639290 MAPKAPK2P49137 400 aa3.16□□□□□ -1.9
CCDC7-213ENST00000639290 MEF2AQ02078 507 aaPredicted RBP3.16□□□□□ -1.9
CCDC7-213ENST00000639290 ID3Q02535 119 aa3.16□□□□□ -1.9
CCDC7-213ENST00000639290 GNA12Q03113 381 aa3.16□□□□□ -1.9
CCDC7-213ENST00000639290 KLC1Q07866 573 aa3.16□□□□□ -1.9
CCDC7-213ENST00000639290 GALNT1Q10472 559 aaPredicted RBP3.16□□□□□ -1.9
CCDC7-213ENST00000639290 PMS2P11Q13670 270 aa3.16□□□□□ -1.9
CCDC7-213ENST00000639290 FASTKQ14296 549 aaKnown RBP3.16□□□□□ -1.9
CCDC7-213ENST00000639290 SLBPQ14493 270 aaKnown RBP eCLIP3.16□□□□□ -1.9
CCDC7-213ENST00000639290 FAM214AQ32MH5 1076 aa3.16□□□□□ -1.9
CCDC7-213ENST00000639290 NRN1LQ496H8 165 aa3.16□□□□□ -1.9
CCDC7-213ENST00000639290 RILPL1Q5EBL4 403 aa3.16□□□□□ -1.9
CCDC7-213ENST00000639290 SERTAD4-AS1Q5TG53 156 aa3.16□□□□□ -1.9
CCDC7-213ENST00000639290 TTI2Q6NXR4 508 aa3.16□□□□□ -1.9
CCDC7-213ENST00000639290 LRRC31Q6UY01 552 aa3.16□□□□□ -1.9
CCDC7-213ENST00000639290 KCNK18Q7Z418 384 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms