RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 ASIC5Q9NY37 505 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 TRPM5Q9NZQ8 1165 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 EMC3Q9P0I2 261 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 PLEKHB1Q9UF11 243 aaPredicted RBP11.59□□□□□ -0.55
CAPN3-221ENST00000638141 ZNF225Q9UK10 706 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 RPS6KA6Q9UK32 745 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 OGDHLQ9ULD0 1010 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 LSM2Q9Y333 95 aaKnown RBP11.59□□□□□ -0.55
CAPN3-221ENST00000638141 CLCA3PQ9Y6N3 262 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 TRAV19A0A0A6YYK7 116 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 A8MVJ9 347 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 SUPT3HB4E1H0 165 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 GFRA2O00451 464 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 MATN3O15232 486 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 PRAMEF1O95521 474 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 VIPP01282 170 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 FHP07954 510 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 STOMP27105 288 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 ERVFC1P60507 584 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 FCN2Q15485 313 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 MED22Q15528 200 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 LGALSLQ3ZCW2 172 aaPredicted RBP11.59□□□□□ -0.55
CAPN3-221ENST00000638141 C6orf132Q5T0Z8 1188 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 RNLSQ5VYX0 342 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 MS4A15Q8N5U1 240 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 EIF4E3Q8N5X7 224 aaKnown RBP11.59□□□□□ -0.55
CAPN3-221ENST00000638141 TMEM145Q8NBT3 493 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 OR52K2Q8NGK3 314 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 OR6B3Q8NGW1 331 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 EXT2Q93063 718 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 SCMH1Q96GD3 660 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 FAM117AQ9C073 453 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 PITHD1Q9GZP4 211 aaPredicted RBP11.59□□□□□ -0.55
CAPN3-221ENST00000638141 TMEM39BQ9GZU3 492 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 SEMA4BQ9NPR2 832 aaPredicted RBP11.59□□□□□ -0.55
CAPN3-221ENST00000638141 TMPRSS4Q9NRS4 437 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 ERAP1Q9NZ08 941 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 PCTPQ9UKL6 214 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 NME7Q9Y5B8 376 aa11.59□□□□□ -0.55
CAPN3-221ENST00000638141 MPZL2O60487 215 aa11.58□□□□□ -0.56
CAPN3-221ENST00000638141 OGNP20774 298 aaKnown RBP11.58□□□□□ -0.56
CAPN3-221ENST00000638141 C4BPBP20851 252 aa11.58□□□□□ -0.56
CAPN3-221ENST00000638141 MAPK1P28482 360 aa11.58□□□□□ -0.56
CAPN3-221ENST00000638141 ADORA2BP29275 332 aa11.58□□□□□ -0.56
CAPN3-221ENST00000638141 SDC2P34741 201 aa11.58□□□□□ -0.56
CAPN3-221ENST00000638141 PCBP1Q15365 356 aaKnown RBP eCLIP11.58□□□□□ -0.56
CAPN3-221ENST00000638141 TAF12Q16514 161 aa11.58□□□□□ -0.56
CAPN3-221ENST00000638141 NHLRC3Q5JS37 347 aa11.58□□□□□ -0.56
CAPN3-221ENST00000638141 CELF3Q5SZQ8 465 aaKnown RBP11.58□□□□□ -0.56
CAPN3-221ENST00000638141 PLAG1Q6DJT9 500 aa11.58□□□□□ -0.56
CAPN3-221ENST00000638141 CATSPERGQ6ZRH7 1159 aa11.58□□□□□ -0.56
CAPN3-221ENST00000638141 MRPL10Q7Z7H8 261 aaKnown RBP11.58□□□□□ -0.56
CAPN3-221ENST00000638141 ADGRF3Q8IZF5 1079 aa11.58□□□□□ -0.56
CAPN3-221ENST00000638141 ATPAF2Q8N5M1 289 aa11.58□□□□□ -0.56
CAPN3-221ENST00000638141 ATP6V1C2Q8NEY4 427 aa11.58□□□□□ -0.56
CAPN3-221ENST00000638141 OR11H4Q8NGC9 324 aa11.58□□□□□ -0.56
CAPN3-221ENST00000638141 OR2T4Q8NH00 348 aa11.58□□□□□ -0.56
CAPN3-221ENST00000638141 ST8SIA2Q92186 375 aa11.58□□□□□ -0.56
CAPN3-221ENST00000638141 PPP3R2Q96LZ3 170 aa11.58□□□□□ -0.56
CAPN3-221ENST00000638141 SAV1Q9H4B6 383 aaPredicted RBP11.58□□□□□ -0.56
CAPN3-221ENST00000638141 SLC28A3Q9HAS3 691 aa11.58□□□□□ -0.56
CAPN3-221ENST00000638141 EXOSC4Q9NPD3 245 aaKnown RBP11.58□□□□□ -0.56
CAPN3-221ENST00000638141 CATSPERZQ9NTU4 200 aa11.58□□□□□ -0.56
CAPN3-221ENST00000638141 RNF112Q9ULX5 631 aa11.58□□□□□ -0.56
CAPN3-221ENST00000638141 SSR3Q9UNL2 185 aa11.58□□□□□ -0.56
CAPN3-221ENST00000638141 CFAP20Q9Y6A4 193 aaKnown RBP11.58□□□□□ -0.56
CAPN3-221ENST00000638141 GLYATL1P3A0A0U1RQE8 302 aa11.57□□□□□ -0.56
CAPN3-221ENST00000638141 LCHNA4D1U4 455 aa11.57□□□□□ -0.56
CAPN3-221ENST00000638141 CBX4O00257 560 aa11.57□□□□□ -0.56
CAPN3-221ENST00000638141 ESR1P03372 595 aa11.57□□□□□ -0.56
CAPN3-221ENST00000638141 WARSP23381 471 aaKnown RBP11.57□□□□□ -0.56
CAPN3-221ENST00000638141 CLCN4P51793 760 aa11.57□□□□□ -0.56
CAPN3-221ENST00000638141 ACVR1Q04771 509 aa11.57□□□□□ -0.56
CAPN3-221ENST00000638141 ADIGQ0VDE8 80 aa11.57□□□□□ -0.56
CAPN3-221ENST00000638141 ETFDHQ16134 617 aa11.57□□□□□ -0.56
CAPN3-221ENST00000638141 PLPPR4Q7Z2D5 763 aa11.57□□□□□ -0.56
CAPN3-221ENST00000638141 SULF1Q8IWU6 871 aa11.57□□□□□ -0.56
CAPN3-221ENST00000638141 SLC34A3Q8N130 599 aa11.57□□□□□ -0.56
CAPN3-221ENST00000638141 Q8N402 240 aa11.57□□□□□ -0.56
CAPN3-221ENST00000638141 LRRC71Q8N4P6 559 aa11.57□□□□□ -0.56
CAPN3-221ENST00000638141 ZNF655Q8N720 491 aaPredicted RBP11.57□□□□□ -0.56
CAPN3-221ENST00000638141 UXS1Q8NBZ7 420 aa11.57□□□□□ -0.56
CAPN3-221ENST00000638141 PLA2G15Q8NCC3 412 aa11.57□□□□□ -0.56
CAPN3-221ENST00000638141 B3GNT7Q8NFL0 401 aa11.57□□□□□ -0.56
CAPN3-221ENST00000638141 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.57□□□□□ -0.56
CAPN3-221ENST00000638141 NXPE2Q96DL1 559 aa11.57□□□□□ -0.56
CAPN3-221ENST00000638141 ZNF436Q9C0F3 470 aaPredicted RBP11.57□□□□□ -0.56
CAPN3-221ENST00000638141 GHITMQ9H3K2 345 aa11.57□□□□□ -0.56
CAPN3-221ENST00000638141 GKN1Q9NS71 199 aa11.57□□□□□ -0.56
CAPN3-221ENST00000638141 RAD18Q9NS91 495 aa11.57□□□□□ -0.56
CAPN3-221ENST00000638141 SLCO1C1Q9NYB5 712 aa11.57□□□□□ -0.56
CAPN3-221ENST00000638141 PCDHGA2Q9Y5H1 932 aa11.57□□□□□ -0.56
CAPN3-221ENST00000638141 APOL3O95236 402 aa11.57□□□□□ -0.56
CAPN3-221ENST00000638141 MT-CYBP00156 380 aaPredicted RBP11.57□□□□□ -0.56
CAPN3-221ENST00000638141 HOXB9P17482 250 aaPredicted RBP11.57□□□□□ -0.56
CAPN3-221ENST00000638141 BTF3P20290 206 aaKnown RBP11.57□□□□□ -0.56
CAPN3-221ENST00000638141 UBA1P22314 1058 aaKnown RBP11.57□□□□□ -0.56
CAPN3-221ENST00000638141 SLC6A1P30531 599 aa11.57□□□□□ -0.56
CAPN3-221ENST00000638141 PITX1P78337 314 aaPredicted RBP11.57□□□□□ -0.56
CAPN3-221ENST00000638141 PABPC1L2AQ5JQF8 200 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms