RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 ARPINQ7Z6K5 226 aa14.66□□□□□ -0.06
CLN6-219ENST00000637329 TRIM73Q86UV7 250 aa14.66□□□□□ -0.06
CLN6-219ENST00000637329 RETREG3Q86VR2 466 aa14.66□□□□□ -0.06
CLN6-219ENST00000637329 ULK2Q8IYT8 1036 aa14.66□□□□□ -0.06
CLN6-219ENST00000637329 MINDY1Q8N5J2 469 aa14.66□□□□□ -0.06
CLN6-219ENST00000637329 OR6C4Q8NGE1 309 aa14.66□□□□□ -0.06
CLN6-219ENST00000637329 MTERF3Q96E29 417 aa14.66□□□□□ -0.06
CLN6-219ENST00000637329 LOXL4Q96JB6 756 aa14.66□□□□□ -0.06
CLN6-219ENST00000637329 CD180Q99467 661 aa14.66□□□□□ -0.06
CLN6-219ENST00000637329 ZFYVE21Q9BQ24 234 aa14.66□□□□□ -0.06
CLN6-219ENST00000637329 REXO4Q9GZR2 422 aaKnown RBP14.66□□□□□ -0.06
CLN6-219ENST00000637329 ABCG4Q9H172 646 aa14.66□□□□□ -0.06
CLN6-219ENST00000637329 SEMA6CQ9H3T2 930 aa14.66□□□□□ -0.06
CLN6-219ENST00000637329 SPAG4Q9NPE6 437 aa14.66□□□□□ -0.06
CLN6-219ENST00000637329 EPHA6Q9UF33 1036 aa14.66□□□□□ -0.06
CLN6-219ENST00000637329 CROTQ9UKG9 612 aa14.66□□□□□ -0.06
CLN6-219ENST00000637329 ARHGEF17Q96PE2 2063 aaPredicted RBP14.65□□□□□ -0.06
CLN6-219ENST00000637329 NCOR2Q9Y618 2525 aa14.65□□□□□ -0.06
CLN6-219ENST00000637329 LRIT2A6NDA9 550 aa14.65□□□□□ -0.06
CLN6-219ENST00000637329 C9JVG2 144 aa14.65□□□□□ -0.06
CLN6-219ENST00000637329 CAPN5O15484 640 aaPredicted RBP14.65□□□□□ -0.06
CLN6-219ENST00000637329 CFIP05156 583 aa14.65□□□□□ -0.06
CLN6-219ENST00000637329 GIMD1P0DJR0 217 aa14.65□□□□□ -0.06
CLN6-219ENST00000637329 GLB1P16278 677 aa14.65□□□□□ -0.06
CLN6-219ENST00000637329 DDX5P17844 614 aaKnown RBP14.65□□□□□ -0.06
CLN6-219ENST00000637329 BSGP35613 385 aa14.65□□□□□ -0.06
CLN6-219ENST00000637329 MTTPP55157 894 aa14.65□□□□□ -0.06
CLN6-219ENST00000637329 TRA2BP62995 288 aaKnown RBP14.65□□□□□ -0.06
CLN6-219ENST00000637329 NFYCQ13952 458 aa14.65□□□□□ -0.06
CLN6-219ENST00000637329 TLR1Q15399 786 aa14.65□□□□□ -0.06
CLN6-219ENST00000637329 SPANXN4Q5MJ08 99 aa14.65□□□□□ -0.06
CLN6-219ENST00000637329 FCRL6Q6DN72 434 aa14.65□□□□□ -0.06
CLN6-219ENST00000637329 PGM2L1Q6PCE3 622 aa14.65□□□□□ -0.06
CLN6-219ENST00000637329 SLC23A3Q6PIS1 610 aa14.65□□□□□ -0.06
CLN6-219ENST00000637329 R3HCC1LQ7Z5L2 792 aaKnown RBP14.65□□□□□ -0.06
CLN6-219ENST00000637329 ASPGQ86U10 573 aa14.65□□□□□ -0.06
CLN6-219ENST00000637329 PLD3Q8IV08 490 aa14.65□□□□□ -0.06
CLN6-219ENST00000637329 SCUBE1Q8IWY4 988 aa14.65□□□□□ -0.06
CLN6-219ENST00000637329 FAM20CQ8IXL6 584 aa14.65□□□□□ -0.06
CLN6-219ENST00000637329 SLC25A45Q8N413 288 aa14.65□□□□□ -0.06
CLN6-219ENST00000637329 KRTCAP2Q8N6L1 136 aa14.65□□□□□ -0.06
CLN6-219ENST00000637329 ZNF655Q8N720 491 aaPredicted RBP14.65□□□□□ -0.06
CLN6-219ENST00000637329 OR2L5Q8NG80 312 aa14.65□□□□□ -0.06
CLN6-219ENST00000637329 OR8J2Q8NGG1 315 aa14.65□□□□□ -0.06
CLN6-219ENST00000637329 CLHC1Q8NHS4 586 aa14.65□□□□□ -0.06
CLN6-219ENST00000637329 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.65□□□□□ -0.06
CLN6-219ENST00000637329 GAL3ST3Q96A11 431 aa14.65□□□□□ -0.06
CLN6-219ENST00000637329 VPS33AQ96AX1 596 aa14.65□□□□□ -0.06
CLN6-219ENST00000637329 ZNF764Q96H86 408 aaPredicted RBP14.65□□□□□ -0.06
CLN6-219ENST00000637329 KCNC2Q96PR1 638 aa14.65□□□□□ -0.06
CLN6-219ENST00000637329 PRPF18Q99633 342 aaKnown RBP14.65□□□□□ -0.06
CLN6-219ENST00000637329 THTPAQ9BU02 230 aa14.65□□□□□ -0.06
CLN6-219ENST00000637329 ZNF717Q9BY31 904 aaPredicted RBP14.65□□□□□ -0.06
CLN6-219ENST00000637329 SLC6A16Q9GZN6 736 aa14.65□□□□□ -0.06
CLN6-219ENST00000637329 RMND5AQ9H871 391 aa14.65□□□□□ -0.06
CLN6-219ENST00000637329 EVA1BQ9NVM1 165 aa14.65□□□□□ -0.06
CLN6-219ENST00000637329 FAM120CQ9NX05 1096 aaKnown RBP14.65□□□□□ -0.06
CLN6-219ENST00000637329 BAIAP2L1Q9UHR4 511 aa14.65□□□□□ -0.06
CLN6-219ENST00000637329 PILRAQ9UKJ1 303 aa14.65□□□□□ -0.06
CLN6-219ENST00000637329 SLC6A14Q9UN76 642 aa14.65□□□□□ -0.06
CLN6-219ENST00000637329 MAN2B2Q9Y2E5 1009 aa14.65□□□□□ -0.06
CLN6-219ENST00000637329 PCDHGA7Q9Y5G6 932 aa14.65□□□□□ -0.06
CLN6-219ENST00000637329 PCDH15Q96QU1 1955 aa14.65□□□□□ -0.06
CLN6-219ENST00000637329 TMEM131Q92545 1883 aa14.65□□□□□ -0.06
CLN6-219ENST00000637329 ACACBO00763 2458 aa14.64□□□□□ -0.07
CLN6-219ENST00000637329 A0A088AWK7 358 aa14.64□□□□□ -0.07
CLN6-219ENST00000637329 ARHGAP10A1A4S6 786 aa14.64□□□□□ -0.07
CLN6-219ENST00000637329 TLCD2A6NGC4 264 aa14.64□□□□□ -0.07
CLN6-219ENST00000637329 URADA6NGE7 173 aa14.64□□□□□ -0.07
CLN6-219ENST00000637329 FXYD1O00168 92 aa14.64□□□□□ -0.07
CLN6-219ENST00000637329 CIB2O75838 187 aa14.64□□□□□ -0.07
CLN6-219ENST00000637329 SCELO95171 688 aa14.64□□□□□ -0.07
CLN6-219ENST00000637329 EPN2O95208 641 aa14.64□□□□□ -0.07
CLN6-219ENST00000637329 PNLIPP16233 465 aa14.64□□□□□ -0.07
CLN6-219ENST00000637329 TPP2P29144 1249 aaPredicted RBP14.64□□□□□ -0.07
CLN6-219ENST00000637329 HNRNPH1P31943 449 aaKnown RBP14.64□□□□□ -0.07
CLN6-219ENST00000637329 S100A3P33764 101 aa14.64□□□□□ -0.07
CLN6-219ENST00000637329 KIR3DL1P43629 444 aa14.64□□□□□ -0.07
CLN6-219ENST00000637329 PSME3P61289 254 aa14.64□□□□□ -0.07
CLN6-219ENST00000637329 ELF3P78545 371 aaPredicted RBP14.64□□□□□ -0.07
CLN6-219ENST00000637329 GPLD1P80108 840 aa14.64□□□□□ -0.07
CLN6-219ENST00000637329 HYAL2Q12891 473 aa14.64□□□□□ -0.07
CLN6-219ENST00000637329 BNIP3Q12983 259 aa14.64□□□□□ -0.07
CLN6-219ENST00000637329 PDE7AQ13946 482 aa14.64□□□□□ -0.07
CLN6-219ENST00000637329 HLA-BQ31612 363 aa14.64□□□□□ -0.07
CLN6-219ENST00000637329 MANEAQ5SRI9 462 aa14.64□□□□□ -0.07
CLN6-219ENST00000637329 C6orf163Q5TEZ5 329 aa14.64□□□□□ -0.07
CLN6-219ENST00000637329 TRIM40Q6P9F5 258 aa14.64□□□□□ -0.07
CLN6-219ENST00000637329 VN1R4Q7Z5H5 301 aa14.64□□□□□ -0.07
CLN6-219ENST00000637329 DHDDSQ86SQ9 333 aa14.64□□□□□ -0.07
CLN6-219ENST00000637329 ZNF761Q86XN6 746 aaPredicted RBP14.64□□□□□ -0.07
CLN6-219ENST00000637329 SLC35F3Q8IY50 421 aa14.64□□□□□ -0.07
CLN6-219ENST00000637329 TMEM132CQ8N3T6 1108 aa14.64□□□□□ -0.07
CLN6-219ENST00000637329 C19orf47Q8N9M1 422 aaKnown RBP14.64□□□□□ -0.07
CLN6-219ENST00000637329 FAM13CQ8NE31 585 aa14.64□□□□□ -0.07
CLN6-219ENST00000637329 OR4C6Q8NH72 309 aa14.64□□□□□ -0.07
CLN6-219ENST00000637329 SAP25Q8TEE9 199 aa14.64□□□□□ -0.07
CLN6-219ENST00000637329 TM4SF19Q96DZ7 209 aa14.64□□□□□ -0.07
CLN6-219ENST00000637329 SLC45A3Q96JT2 553 aa14.64□□□□□ -0.07
CLN6-219ENST00000637329 OR2A5Q96R48 311 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms