RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 C17orf62Q9BQA9 187 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 DPH2Q9BQC3 489 aaPredicted RBP6.42□□□□□ -1.38
UPF3B-205ENST00000636792 ACAT2Q9BWD1 397 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 ASPSCR1Q9BZE9 553 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 SHCBP1LQ9BZQ2 653 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 NRSN2Q9GZP1 204 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 ELOVL6Q9H5J4 265 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 SYNDIG1Q9H7V2 258 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 MID1IP1Q9NPA3 183 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 SEMA4BQ9NPR2 832 aaPredicted RBP6.42□□□□□ -1.38
UPF3B-205ENST00000636792 FGF21Q9NSA1 209 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 ABCF3Q9NUQ8 709 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 GEMIN8Q9NWZ8 242 aaKnown RBP6.42□□□□□ -1.38
UPF3B-205ENST00000636792 VTI1BQ9UEU0 232 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 SERTAD3Q9UJW9 196 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 ACSL6Q9UKU0 697 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 ASB1Q9Y576 335 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 SLC22A7Q9Y694 548 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 NUP210LQ5VU65 1888 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 BLACEA4D250 179 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 KRT87PA6NCN2 255 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 SLC9B1P1A6NJY1 282 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 TRPC5OSA6NMA1 111 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.41□□□□□ -1.38
UPF3B-205ENST00000636792 H7BY64 318 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 HAT1O14929 419 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 PLD2O14939 933 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 AZIN1O14977 448 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 ULK1O75385 1050 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 CSO75390 466 aaKnown RBP6.41□□□□□ -1.38
UPF3B-205ENST00000636792 CRCPO75575 148 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 RGS9O75916 674 aaPredicted RBP6.41□□□□□ -1.38
UPF3B-205ENST00000636792 RSL1D1O76021 490 aaKnown RBP6.41□□□□□ -1.38
UPF3B-205ENST00000636792 CD63P08962 238 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 JMJD7P0C870 316 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 ALOX15P16050 662 aaPredicted RBP6.41□□□□□ -1.38
UPF3B-205ENST00000636792 CD22P20273 847 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 SOX11P35716 441 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 ARL1P40616 181 aaPredicted RBP6.41□□□□□ -1.38
UPF3B-205ENST00000636792 MDH1P40925 334 aaKnown RBP6.41□□□□□ -1.38
UPF3B-205ENST00000636792 LSSP48449 732 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 RPL14P50914 215 aaKnown RBP6.41□□□□□ -1.38
UPF3B-205ENST00000636792 CDH13P55290 713 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 ERVPABLB-1P60509 514 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 MC2RQ01718 297 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 BST1Q10588 318 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 MAD2L1Q13257 205 aaPredicted RBP6.41□□□□□ -1.38
UPF3B-205ENST00000636792 TUBB3Q13509 450 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 GRM7Q14831 915 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 HERC3Q15034 1050 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 MUM1Q2TAK8 710 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 PRTGQ2VWP7 1150 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 SPIN4Q56A73 249 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 ARL13AQ5H913 290 aaPredicted RBP6.41□□□□□ -1.38
UPF3B-205ENST00000636792 CATSPEREQ5SY80 951 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 NKAIN2Q5VXU1 208 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 KANK2Q63ZY3 851 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 TTC19Q6DKK2 380 aaPredicted RBP6.41□□□□□ -1.38
UPF3B-205ENST00000636792 LETMD1Q6P1Q0 360 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 PRMT9Q6P2P2 845 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 DHRS13Q6UX07 377 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 USP53Q70EK8 1073 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 ABHD13Q7L211 337 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 RAB11FIP2Q7L804 512 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 TMPRSS9Q7Z410 1059 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 ASPGQ86U10 573 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 CRLF3Q8IUI8 442 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 FAM9CQ8IZT9 166 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 BMPERQ8N8U9 685 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 TTC29Q8NA56 475 aaPredicted RBP6.41□□□□□ -1.38
UPF3B-205ENST00000636792 OR7G3Q8NG95 312 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 OR52B6Q8NGF0 335 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 PIWIL2Q8TC59 973 aaKnown RBP6.41□□□□□ -1.38
UPF3B-205ENST00000636792 METTL6Q8TCB7 284 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 PROKR1Q8TCW9 393 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 MGARPQ8TDB4 240 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 JPH3Q8WXH2 748 aaPredicted RBP6.41□□□□□ -1.38
UPF3B-205ENST00000636792 ZNF75CPQ92670 426 aaPredicted RBP6.41□□□□□ -1.38
UPF3B-205ENST00000636792 GAL3ST3Q96A11 431 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 ZNF501Q96CX3 271 aaPredicted RBP6.41□□□□□ -1.38
UPF3B-205ENST00000636792 NXPE2Q96DL1 559 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 TM4SF19Q96DZ7 209 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 CMTM7Q96FZ5 175 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 PRAP1Q96NZ9 151 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 NSUN5Q96P11 429 aaKnown RBP6.41□□□□□ -1.38
UPF3B-205ENST00000636792 OR2A5Q96R48 311 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 SERPINI1Q99574 410 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 PAIP2Q9BPZ3 127 aaKnown RBP6.41□□□□□ -1.38
UPF3B-205ENST00000636792 NSRP1Q9H0G5 558 aaKnown RBP6.41□□□□□ -1.38
UPF3B-205ENST00000636792 C12orf65Q9H3J6 166 aaKnown RBP6.41□□□□□ -1.38
UPF3B-205ENST00000636792 RIC8BQ9NVN3 520 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 SIRT5Q9NXA8 310 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 CIDEBQ9UHD4 219 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 RAPGEFL1Q9UHV5 662 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 ADAM29Q9UKF5 820 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 RARRES3Q9UL19 164 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 CDC14AQ9UNH5 594 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 MAPRE3Q9UPY8 281 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 TMED5Q9Y3A6 229 aa6.41□□□□□ -1.38
UPF3B-205ENST00000636792 PCDHGA7Q9Y5G6 932 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms