RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 FAM187AA6NFU0 413 aa16.88■□□□□ 0.29
PNKP-225ENST00000636214 CHST10O43529 356 aa16.88■□□□□ 0.29
PNKP-225ENST00000636214 PRAMEF2O60811 474 aa16.88■□□□□ 0.29
PNKP-225ENST00000636214 H2AFYO75367 372 aaKnown RBP16.88■□□□□ 0.29
PNKP-225ENST00000636214 WDR47O94967 919 aa16.88■□□□□ 0.29
PNKP-225ENST00000636214 HNF4AP41235 474 aa16.88■□□□□ 0.29
PNKP-225ENST00000636214 EFNA3P52797 238 aa16.88■□□□□ 0.29
PNKP-225ENST00000636214 TAS2R39P59534 338 aa16.88■□□□□ 0.29
PNKP-225ENST00000636214 OLR1P78380 273 aa16.88■□□□□ 0.29
PNKP-225ENST00000636214 POU4F1Q01851 419 aa16.88■□□□□ 0.29
PNKP-225ENST00000636214 MEP1AQ16819 746 aa16.88■□□□□ 0.29
PNKP-225ENST00000636214 PPP1R3AQ16821 1122 aa16.88■□□□□ 0.29
PNKP-225ENST00000636214 ACER2Q5QJU3 275 aa16.88■□□□□ 0.29
PNKP-225ENST00000636214 NXPE4Q6UWF7 544 aa16.88■□□□□ 0.29
PNKP-225ENST00000636214 TMEM207Q6UWW9 146 aa16.88■□□□□ 0.29
PNKP-225ENST00000636214 GFRALQ6UXV0 394 aa16.88■□□□□ 0.29
PNKP-225ENST00000636214 CYP4X1Q8N118 509 aa16.88■□□□□ 0.29
PNKP-225ENST00000636214 AFAP1L2Q8N4X5 818 aa16.88■□□□□ 0.29
PNKP-225ENST00000636214 TTLQ8NG68 377 aa16.88■□□□□ 0.29
PNKP-225ENST00000636214 OR5T3Q8NGG3 340 aa16.88■□□□□ 0.29
PNKP-225ENST00000636214 DNAJB8Q8NHS0 232 aa16.88■□□□□ 0.29
PNKP-225ENST00000636214 CCT6BQ92526 530 aa16.88■□□□□ 0.29
PNKP-225ENST00000636214 MOCOSQ96EN8 888 aa16.88■□□□□ 0.29
PNKP-225ENST00000636214 FAR2Q96K12 515 aa16.88■□□□□ 0.29
PNKP-225ENST00000636214 DPH5Q9H2P9 285 aa16.88■□□□□ 0.29
PNKP-225ENST00000636214 CLK4Q9HAZ1 481 aaKnown RBP16.88■□□□□ 0.29
PNKP-225ENST00000636214 SAYSD1Q9NPB0 183 aa16.88■□□□□ 0.29
PNKP-225ENST00000636214 MOCS1Q9NZB8 636 aa16.88■□□□□ 0.29
PNKP-225ENST00000636214 SLC22A14Q9Y267 594 aa16.88■□□□□ 0.29
PNKP-225ENST00000636214 MYO7BQ6PIF6 2116 aa16.87■□□□□ 0.29
PNKP-225ENST00000636214 CACNA1DQ01668 2161 aa16.87■□□□□ 0.29
PNKP-225ENST00000636214 OR2W5A6NFC9 320 aa16.87■□□□□ 0.29
PNKP-225ENST00000636214 B4GALT2O60909 372 aa16.87■□□□□ 0.29
PNKP-225ENST00000636214 RNH1P13489 461 aaKnown RBP16.87■□□□□ 0.29
PNKP-225ENST00000636214 GNAZP19086 355 aa16.87■□□□□ 0.29
PNKP-225ENST00000636214 STXBP1P61764 594 aaKnown RBP16.87■□□□□ 0.29
PNKP-225ENST00000636214 RHAGQ02094 409 aa16.87■□□□□ 0.29
PNKP-225ENST00000636214 RBPJQ06330 500 aa16.87■□□□□ 0.29
PNKP-225ENST00000636214 USP10Q14694 798 aaKnown RBP16.87■□□□□ 0.29
PNKP-225ENST00000636214 ZXDCQ2QGD7 858 aaPredicted RBP16.87■□□□□ 0.29
PNKP-225ENST00000636214 ZNF766Q5HY98 468 aa16.87■□□□□ 0.29
PNKP-225ENST00000636214 FCRLBQ6BAA4 426 aa16.87■□□□□ 0.29
PNKP-225ENST00000636214 BEST3Q8N1M1 668 aa16.87■□□□□ 0.29
PNKP-225ENST00000636214 KRT78Q8N1N4 520 aa16.87■□□□□ 0.29
PNKP-225ENST00000636214 HORMAD2Q8N7B1 307 aa16.87■□□□□ 0.29
PNKP-225ENST00000636214 TSLPQ969D9 159 aa16.87■□□□□ 0.29
PNKP-225ENST00000636214 PTCHD1Q96NR3 888 aa16.87■□□□□ 0.29
PNKP-225ENST00000636214 UTP23Q9BRU9 249 aaKnown RBP16.87■□□□□ 0.29
PNKP-225ENST00000636214 SPNS1Q9H2V7 528 aa16.87■□□□□ 0.29
PNKP-225ENST00000636214 CNOT10Q9H9A5 744 aaKnown RBP16.87■□□□□ 0.29
PNKP-225ENST00000636214 MMP25Q9NPA2 562 aa16.87■□□□□ 0.29
PNKP-225ENST00000636214 WWOXQ9NZC7 414 aa16.87■□□□□ 0.29
PNKP-225ENST00000636214 WHRNQ9P202 907 aa16.87■□□□□ 0.29
PNKP-225ENST00000636214 IKZF3Q9UKT9 509 aa16.87■□□□□ 0.29
PNKP-225ENST00000636214 PYCARDQ9ULZ3 195 aa16.87■□□□□ 0.29
PNKP-225ENST00000636214 NBPF19A0A087WUL8 3843 aa16.86■□□□□ 0.29
PNKP-225ENST00000636214 A0A088AWK7 358 aa16.86■□□□□ 0.29
PNKP-225ENST00000636214 WIPF3A6NGB9 483 aa16.86■□□□□ 0.29
PNKP-225ENST00000636214 NCF1BA6NI72 391 aaPredicted RBP16.86■□□□□ 0.29
PNKP-225ENST00000636214 NCF1CA8MVU1 366 aaPredicted RBP16.86■□□□□ 0.29
PNKP-225ENST00000636214 EIF3HO15372 352 aaKnown RBP eCLIP16.86■□□□□ 0.29
PNKP-225ENST00000636214 PRMT3O60678 531 aa16.86■□□□□ 0.29
PNKP-225ENST00000636214 MLYCDO95822 493 aa16.86■□□□□ 0.29
PNKP-225ENST00000636214 S100BP04271 92 aaPredicted RBP16.86■□□□□ 0.29
PNKP-225ENST00000636214 NCF1P14598 390 aaPredicted RBP16.86■□□□□ 0.29
PNKP-225ENST00000636214 ZNF10P21506 573 aaPredicted RBP16.86■□□□□ 0.29
PNKP-225ENST00000636214 HPDP32754 393 aaPredicted RBP16.86■□□□□ 0.29
PNKP-225ENST00000636214 RAB8AP61006 207 aa16.86■□□□□ 0.29
PNKP-225ENST00000636214 TSNQ15631 228 aaKnown RBP16.86■□□□□ 0.29
PNKP-225ENST00000636214 TOR1AIP1Q5JTV8 583 aa16.86■□□□□ 0.29
PNKP-225ENST00000636214 TCAIMQ8N3R3 496 aa16.86■□□□□ 0.29
PNKP-225ENST00000636214 UTP15Q8TED0 518 aaKnown RBP16.86■□□□□ 0.29
PNKP-225ENST00000636214 TAAR6Q96RI8 345 aa16.86■□□□□ 0.29
PNKP-225ENST00000636214 CPNE1Q99829 537 aa16.86■□□□□ 0.29
PNKP-225ENST00000636214 ERP44Q9BS26 406 aa16.86■□□□□ 0.29
PNKP-225ENST00000636214 CAPS2Q9BXY5 557 aa16.86■□□□□ 0.29
PNKP-225ENST00000636214 DERL2Q9GZP9 239 aa16.86■□□□□ 0.29
PNKP-225ENST00000636214 RHBGQ9H310 441 aa16.86■□□□□ 0.29
PNKP-225ENST00000636214 LANCL2Q9NS86 450 aa16.86■□□□□ 0.29
PNKP-225ENST00000636214 SUCOQ9UBS9 1254 aaKnown RBP16.86■□□□□ 0.29
PNKP-225ENST00000636214 UTP11Q9Y3A2 253 aaKnown RBP16.86■□□□□ 0.29
PNKP-225ENST00000636214 SERPINA6P08185 405 aa16.85■□□□□ 0.29
PNKP-225ENST00000636214 CD46P15529 392 aa16.85■□□□□ 0.29
PNKP-225ENST00000636214 CASP6P55212 293 aa16.85■□□□□ 0.29
PNKP-225ENST00000636214 KCNK10P57789 538 aa16.85■□□□□ 0.29
PNKP-225ENST00000636214 SLC26A5P58743 744 aa16.85■□□□□ 0.29
PNKP-225ENST00000636214 MRPS25P82663 173 aaKnown RBP16.85■□□□□ 0.29
PNKP-225ENST00000636214 OC90Q02509 493 aaPredicted RBP16.85■□□□□ 0.29
PNKP-225ENST00000636214 QSOX2Q6ZRP7 698 aa16.85■□□□□ 0.29
PNKP-225ENST00000636214 FJX1Q86VR8 437 aa16.85■□□□□ 0.29
PNKP-225ENST00000636214 CRLF3Q8IUI8 442 aa16.85■□□□□ 0.29
PNKP-225ENST00000636214 ANKRD53Q8N9V6 530 aa16.85■□□□□ 0.29
PNKP-225ENST00000636214 TMEM178AQ8NBL3 297 aa16.85■□□□□ 0.29
PNKP-225ENST00000636214 FAM98AQ8NCA5 519 aaKnown RBP16.85■□□□□ 0.29
PNKP-225ENST00000636214 ANKRD49Q8WVL7 239 aa16.85■□□□□ 0.29
PNKP-225ENST00000636214 PDLIM2Q96JY6 352 aa16.85■□□□□ 0.29
PNKP-225ENST00000636214 SLC6A16Q9GZN6 736 aa16.85■□□□□ 0.29
PNKP-225ENST00000636214 TEX15Q9BXT5 2789 aa16.84■□□□□ 0.29
PNKP-225ENST00000636214 GABRR3A8MPY1 467 aa16.84■□□□□ 0.29
PNKP-225ENST00000636214 CLGNO14967 610 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms