RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 MED20Q9H944 212 aa2.82□□□□□ -1.96
PSPC1-208ENST00000635562 RNPEPL1Q9HAU8 725 aa2.82□□□□□ -1.96
PSPC1-208ENST00000635562 KCNMB3Q9NPA1 279 aa2.82□□□□□ -1.96
PSPC1-208ENST00000635562 RRAGDQ9NQL2 400 aaPredicted RBP2.82□□□□□ -1.96
PSPC1-208ENST00000635562 PIH1D3Q9NQM4 214 aaKnown RBP2.82□□□□□ -1.96
PSPC1-208ENST00000635562 MAN2C1Q9NTJ4 1040 aa2.82□□□□□ -1.96
PSPC1-208ENST00000635562 ARL15Q9NXU5 204 aa2.82□□□□□ -1.96
PSPC1-208ENST00000635562 UBQLN2Q9UHD9 624 aa2.82□□□□□ -1.96
PSPC1-208ENST00000635562 IL17BQ9UHF5 180 aa2.82□□□□□ -1.96
PSPC1-208ENST00000635562 DCDC2Q9UHG0 476 aa2.82□□□□□ -1.96
PSPC1-208ENST00000635562 CRLS1Q9UJA2 301 aa2.82□□□□□ -1.96
PSPC1-208ENST00000635562 SLC25A13Q9UJS0 675 aa2.82□□□□□ -1.96
PSPC1-208ENST00000635562 FBXO4Q9UKT5 387 aa2.82□□□□□ -1.96
PSPC1-208ENST00000635562 PACSIN2Q9UNF0 486 aaPredicted RBP2.82□□□□□ -1.96
PSPC1-208ENST00000635562 SNX7Q9UNH6 387 aa2.82□□□□□ -1.96
PSPC1-208ENST00000635562 ICKQ9UPZ9 632 aa2.82□□□□□ -1.96
PSPC1-208ENST00000635562 CHMP2BQ9UQN3 213 aa2.82□□□□□ -1.96
PSPC1-208ENST00000635562 RNF24Q9Y225 148 aa2.82□□□□□ -1.96
PSPC1-208ENST00000635562 ENTPD4Q9Y227 616 aa2.82□□□□□ -1.96
PSPC1-208ENST00000635562 RUVBL2Q9Y230 463 aaKnown RBP2.82□□□□□ -1.96
PSPC1-208ENST00000635562 PUS1Q9Y606 427 aaKnown RBP eCLIP2.82□□□□□ -1.96
PSPC1-208ENST00000635562 MST1RQ04912 1400 aa2.82□□□□□ -1.96
PSPC1-208ENST00000635562 PLB1Q6P1J6 1458 aa2.82□□□□□ -1.96
PSPC1-208ENST00000635562 TRAV25A0A0B4J276 109 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 A0A1W2PR77 199 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 TCRBV7S3A2A0A539 114 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 MEX3AA1L020 520 aaKnown RBP2.81□□□□□ -1.96
PSPC1-208ENST00000635562 TMEM247A6NEH6 219 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 CXorf65A6NEN9 183 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 HAS3O00219 553 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 GPR171O14626 319 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 CHMP2AO43633 222 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 IDH3BO43837 385 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 CALUO43852 315 aaPredicted RBP2.81□□□□□ -1.96
PSPC1-208ENST00000635562 SELENOFO60613 162 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 HSF2BPO75031 334 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 CNOT3O75175 753 aaKnown RBP2.81□□□□□ -1.96
PSPC1-208ENST00000635562 NDUFS6O75380 124 aaKnown RBP2.81□□□□□ -1.96
PSPC1-208ENST00000635562 CABYRO75952 493 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 DFFBO76075 338 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 SEMA3DO95025 777 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 CCNB2O95067 398 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 KRT6AP02538 564 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 SRPRAP08240 638 aaKnown RBP2.81□□□□□ -1.96
PSPC1-208ENST00000635562 STAG3L1P0CL83 205 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 FCGR2AP12318 317 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 DARSP14868 501 aaKnown RBP2.81□□□□□ -1.96
PSPC1-208ENST00000635562 POLR2EP19388 210 aaKnown RBP2.81□□□□□ -1.96
PSPC1-208ENST00000635562 ATP6V1C1P21283 382 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 NT5EP21589 574 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 PSMA2P25787 234 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 HOXC9P31274 260 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 AKT2P31751 481 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 PTPN9P43378 593 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 PCYT1AP49585 367 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 CCR4P51679 360 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 SUOXP51687 545 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 P2RX3P56373 397 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 DAOAP59103 153 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 PTENP60484 403 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 YWHAGP61981 247 aaKnown RBP eCLIP2.81□□□□□ -1.96
PSPC1-208ENST00000635562 SKP1P63208 163 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 EFNB1P98172 346 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 BNC1Q01954 994 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 PLOD1Q02809 727 aaPredicted RBP2.81□□□□□ -1.96
PSPC1-208ENST00000635562 CSTF1Q05048 431 aaKnown RBP2.81□□□□□ -1.96
PSPC1-208ENST00000635562 ENPEPQ07075 957 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 CXCL9Q07325 125 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 BST1Q10588 318 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 SMARCB1Q12824 385 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 MSLNQ13421 630 aaPredicted RBP2.81□□□□□ -1.96
PSPC1-208ENST00000635562 ART3Q13508 389 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 GPR176Q14439 515 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 DAZAP2Q15038 168 aaPredicted RBP2.81□□□□□ -1.96
PSPC1-208ENST00000635562 KYAT1Q16773 422 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 SYT16Q17RD7 645 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 PNLIPRP3Q17RR3 467 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 AP5B1Q2VPB7 878 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 MOGAT2Q3SYC2 334 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 DNAL1Q4LDG9 190 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 PLEKHO1Q53GL0 409 aaPredicted RBP2.81□□□□□ -1.96
PSPC1-208ENST00000635562 ARL13AQ5H913 290 aaPredicted RBP2.81□□□□□ -1.96
PSPC1-208ENST00000635562 EOGTQ5NDL2 527 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 BEND6Q5SZJ8 279 aaPredicted RBP2.81□□□□□ -1.96
PSPC1-208ENST00000635562 C6orf163Q5TEZ5 329 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 MLIPQ5VWP3 458 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 NKAIN2Q5VXU1 208 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 PMS2CLQ68D20 193 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 ZNF626Q68DY1 528 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 NCAPH2Q6IBW4 605 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 SLC25A25Q6KCM7 469 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 TMEM81Q6P7N7 255 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 DLEU7Q6UYE1 221 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 DEF8Q6ZN54 512 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 TMEM182Q6ZP80 229 aaPredicted RBP2.81□□□□□ -1.96
PSPC1-208ENST00000635562 GPRIN3Q6ZVF9 776 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 FRA10AC1Q70Z53 315 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 NDUFAF7Q7L592 441 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 SLC46A3Q7Z3Q1 461 aa2.81□□□□□ -1.96
PSPC1-208ENST00000635562 VTCN1Q7Z7D3 282 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms