RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 GAGE12FP0CL80 117 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 GAGE12GP0CL81 117 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 GAGE12IP0CL82 117 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 SRCP12931 536 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 ATP6V1B1P15313 513 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 ARF4P18085 180 aaPredicted RBP2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 TMOD1P28289 359 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 GNA11P29992 359 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 AXLP30530 894 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 ARL2P36404 184 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 MAGEA9P43362 315 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 QARSP47897 775 aaKnown RBP2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 RFX2P48378 723 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 AMTP48728 403 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 GLUD2P49448 558 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 TAF6P49848 677 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 CLCNKAP51800 687 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 BMXP51813 675 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 ZNF75DP51815 510 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 CAPZA1P52907 286 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 CTSCP53634 463 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 PSMC5P62195 406 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 SNRPEP62304 92 aaKnown RBP2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 ROR2Q01974 943 aaKnown RBP2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 HSPB3Q12988 150 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 GAGE1Q13065 139 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 GAGE4Q13068 117 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 EMC2Q15006 297 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 E2F5Q15329 346 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 CTF1Q16619 201 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 VWC2Q2TAL6 325 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 ODF2Q5BJF6 829 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 XKR4Q5GH76 650 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 FNBP1LQ5T0N5 605 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 FAM69BQ5VUD6 431 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 KRT39Q6A163 491 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 TWF2Q6IBS0 349 aaKnown RBP2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 SLC8B1Q6J4K2 584 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 FUT10Q6P4F1 479 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 SHQ1Q6PI26 577 aaKnown RBP2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 FIGLAQ6QHK4 219 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 GPR180Q86V85 440 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 C4orf19Q8IY42 314 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 SLC5A8Q8N695 610 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 METTL13Q8N6R0 699 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 NEXN-AS1Q8NBZ9 246 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 MSANTD4Q8NCY6 345 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 CCDC148Q8NFR7 591 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 OR2AK2Q8NG84 335 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 TBCKQ8TEA7 893 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 KCNE4Q8WWG9 221 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 ROBO4Q8WZ75 1007 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 RND1Q92730 232 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 FGF13Q92913 245 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 EXT2Q93063 718 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 MR1Q95460 341 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 NXNL1Q96CM4 212 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 B3GALT6Q96L58 329 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 RMDN2Q96LZ7 410 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 FAM20AQ96MK3 541 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 OR6C1Q96RD1 312 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 SEMA3CQ99985 751 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 HSD17B14Q9BPX1 270 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 FERMT1Q9BQL6 677 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 RPP25Q9BUL9 199 aaKnown RBP2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 TEKT3Q9BXF9 490 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 GCOM2Q9BZD3 368 aaPredicted RBP2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 DNAI2Q9GZS0 605 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 NT5C3AQ9H0P0 336 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 WNT5BQ9H1J7 359 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 ZNF556Q9HAH1 456 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 TRPV4Q9HBA0 871 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 PCDH9Q9HC56 1237 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 C6orf50Q9HD87 102 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 CD93Q9NPY3 652 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 TRPV5Q9NQA5 729 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 MRPL17Q9NRX2 175 aaKnown RBP2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 MIOSQ9NXC5 875 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 CACNG4Q9UBN1 327 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 SLC24A2Q9UI40 661 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 FBXL2Q9UKC9 423 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 ADAM28Q9UKQ2 775 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 AGO1Q9UL18 857 aaKnown RBP2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 CDH7Q9ULB5 785 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 FZD10Q9ULW2 581 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 B3GALT5Q9Y2C3 310 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 MTF2Q9Y483 593 aaPredicted RBP2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 LOXL2Q9Y4K0 774 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 HES2Q9Y543 173 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 NME7Q9Y5B8 376 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 POMT1Q9Y6A1 747 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 R4GN57 208 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 ANAPC1Q9H1A4 1944 aa2.36□□□□□ -2.03
SMARCB1-208ENST00000634926 NUP205Q92621 2012 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 CACNA1EQ15878 2313 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 A0A0U1RQJ8 604 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 A0A1W2PP11 408 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 RPS10-NUDT3A0A1W2PQS6 291 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 ANKUB1A6NFN9 424 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms