RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 CAMKVQ8NCB2 501 aa15.8■□□□□ 0.12
CCNA1-203ENST00000625767 THAP11Q96EK4 314 aa15.8■□□□□ 0.12
CCNA1-203ENST00000625767 CMTM7Q96FZ5 175 aa15.8■□□□□ 0.12
CCNA1-203ENST00000625767 FAR2Q96K12 515 aa15.8■□□□□ 0.12
CCNA1-203ENST00000625767 C17orf62Q9BQA9 187 aa15.8■□□□□ 0.12
CCNA1-203ENST00000625767 RTKNQ9BST9 563 aa15.8■□□□□ 0.12
CCNA1-203ENST00000625767 ZNF717Q9BY31 904 aaPredicted RBP15.8■□□□□ 0.12
CCNA1-203ENST00000625767 TRIM55Q9BYV6 548 aa15.8■□□□□ 0.12
CCNA1-203ENST00000625767 REXO4Q9GZR2 422 aaKnown RBP15.8■□□□□ 0.12
CCNA1-203ENST00000625767 AKTIPQ9H8T0 292 aa15.8■□□□□ 0.12
CCNA1-203ENST00000625767 BRF2Q9HAW0 419 aa15.8■□□□□ 0.12
CCNA1-203ENST00000625767 VTI1BQ9UEU0 232 aa15.8■□□□□ 0.12
CCNA1-203ENST00000625767 SERTM1A2A2V5 107 aa15.79■□□□□ 0.12
CCNA1-203ENST00000625767 ERI3O43414 337 aaKnown RBP15.79■□□□□ 0.12
CCNA1-203ENST00000625767 SRPX2O60687 465 aaPredicted RBP15.79■□□□□ 0.12
CCNA1-203ENST00000625767 DNAJB6O75190 326 aa15.79■□□□□ 0.12
CCNA1-203ENST00000625767 MSL3P1P0C860 447 aa15.79■□□□□ 0.12
CCNA1-203ENST00000625767 ITGA1P56199 1179 aa15.79■□□□□ 0.12
CCNA1-203ENST00000625767 PWP1Q13610 501 aa15.79■□□□□ 0.12
CCNA1-203ENST00000625767 ADPRMQ3LIE5 342 aa15.79■□□□□ 0.12
CCNA1-203ENST00000625767 C3orf38Q5JPI3 329 aa15.79■□□□□ 0.12
CCNA1-203ENST00000625767 TMEM198Q66K66 360 aa15.79■□□□□ 0.12
CCNA1-203ENST00000625767 TMEM214Q6NUQ4 689 aaKnown RBP15.79■□□□□ 0.12
CCNA1-203ENST00000625767 RAB11FIP2Q7L804 512 aa15.79■□□□□ 0.12
CCNA1-203ENST00000625767 CPLX4Q7Z7G2 160 aa15.79■□□□□ 0.12
CCNA1-203ENST00000625767 METTL27Q8N6F8 245 aaPredicted RBP15.79■□□□□ 0.12
CCNA1-203ENST00000625767 UTP15Q8TED0 518 aaKnown RBP15.79■□□□□ 0.12
CCNA1-203ENST00000625767 ADAMTS14Q8WXS8 1223 aa15.79■□□□□ 0.12
CCNA1-203ENST00000625767 TUBGCP3Q96CW5 907 aa15.79■□□□□ 0.12
CCNA1-203ENST00000625767 LIN37Q96GY3 246 aaPredicted RBP15.79■□□□□ 0.12
CCNA1-203ENST00000625767 SLC45A3Q96JT2 553 aa15.79■□□□□ 0.12
CCNA1-203ENST00000625767 TMEM120AQ9BXJ8 343 aa15.79■□□□□ 0.12
CCNA1-203ENST00000625767 VPS29Q9UBQ0 182 aa15.79■□□□□ 0.12
CCNA1-203ENST00000625767 SLCO1B7G3V0H7 640 aa15.79■□□□□ 0.12
CCNA1-203ENST00000625767 TROVE2P10155 538 aaKnown RBP eCLIP15.79■□□□□ 0.12
CCNA1-203ENST00000625767 IL1RNP18510 177 aa15.79■□□□□ 0.12
CCNA1-203ENST00000625767 PTX3P26022 381 aaPredicted RBP15.79■□□□□ 0.12
CCNA1-203ENST00000625767 MAPK10P53779 464 aa15.79■□□□□ 0.12
CCNA1-203ENST00000625767 ACY1Q03154 408 aa15.79■□□□□ 0.12
CCNA1-203ENST00000625767 RGS1Q08116 209 aa15.79■□□□□ 0.12
CCNA1-203ENST00000625767 RFTN2Q52LD8 501 aaPredicted RBP15.79■□□□□ 0.12
CCNA1-203ENST00000625767 PWWP2BQ6NUJ5 590 aa15.79■□□□□ 0.12
CCNA1-203ENST00000625767 ZNF793Q6ZN11 406 aa15.79■□□□□ 0.12
CCNA1-203ENST00000625767 RNF165Q6ZSG1 346 aa15.79■□□□□ 0.12
CCNA1-203ENST00000625767 LARP4Q71RC2 724 aaKnown RBP eCLIP15.79■□□□□ 0.12
CCNA1-203ENST00000625767 PDSS2Q86YH6 399 aa15.79■□□□□ 0.12
CCNA1-203ENST00000625767 C1orf52Q8N6N3 182 aaKnown RBP15.79■□□□□ 0.12
CCNA1-203ENST00000625767 GBP7Q8N8V2 638 aaPredicted RBP15.79■□□□□ 0.12
CCNA1-203ENST00000625767 SLC38A9Q8NBW4 561 aa15.79■□□□□ 0.12
CCNA1-203ENST00000625767 C10orf82Q8WW14 230 aa15.79■□□□□ 0.12
CCNA1-203ENST00000625767 MAELQ96JY0 434 aaKnown RBP15.79■□□□□ 0.12
CCNA1-203ENST00000625767 MARK4Q96L34 752 aa15.79■□□□□ 0.12
CCNA1-203ENST00000625767 TEFMQ96QE5 360 aaKnown RBP15.79■□□□□ 0.12
CCNA1-203ENST00000625767 CCT8L2Q96SF2 557 aa15.79■□□□□ 0.12
CCNA1-203ENST00000625767 CMKLR1Q99788 373 aa15.79■□□□□ 0.12
CCNA1-203ENST00000625767 C1orf50Q9BV19 199 aa15.79■□□□□ 0.12
CCNA1-203ENST00000625767 STRADBQ9C0K7 418 aa15.79■□□□□ 0.12
CCNA1-203ENST00000625767 CCDC88CQ9P219 2028 aa15.79■□□□□ 0.12
CCNA1-203ENST00000625767 DHCR7Q9UBM7 475 aaKnown RBP15.79■□□□□ 0.12
CCNA1-203ENST00000625767 ADGRE2Q9UHX3 823 aa15.79■□□□□ 0.12
CCNA1-203ENST00000625767 SATB2Q9UPW6 733 aa15.79■□□□□ 0.12
CCNA1-203ENST00000625767 FRYQ5TBA9 3013 aa15.78■□□□□ 0.12
CCNA1-203ENST00000625767 ZNF860A6NHJ4 632 aa15.78■□□□□ 0.12
CCNA1-203ENST00000625767 SLC28A1O00337 649 aa15.78■□□□□ 0.12
CCNA1-203ENST00000625767 ZSCAN9O15535 394 aaPredicted RBP15.78■□□□□ 0.12
CCNA1-203ENST00000625767 ZNF749O43361 778 aa15.78■□□□□ 0.12
CCNA1-203ENST00000625767 RGS14O43566 566 aa15.78■□□□□ 0.12
CCNA1-203ENST00000625767 EEDO75530 441 aaKnown RBP15.78■□□□□ 0.12
CCNA1-203ENST00000625767 KLHL18O94889 574 aa15.78■□□□□ 0.12
CCNA1-203ENST00000625767 SMIM10L1P0DMW3 83 aa15.78■□□□□ 0.12
CCNA1-203ENST00000625767 CDK4P11802 303 aa15.78■□□□□ 0.12
CCNA1-203ENST00000625767 ZNF28P17035 718 aa15.78■□□□□ 0.12
CCNA1-203ENST00000625767 GSTM2P28161 218 aa15.78■□□□□ 0.12
CCNA1-203ENST00000625767 SERPINB1P30740 379 aa15.78■□□□□ 0.12
CCNA1-203ENST00000625767 GCGRP47871 477 aa15.78■□□□□ 0.12
CCNA1-203ENST00000625767 RPL38P63173 70 aaKnown RBP15.78■□□□□ 0.12
CCNA1-203ENST00000625767 RAE1P78406 368 aaKnown RBP15.78■□□□□ 0.12
CCNA1-203ENST00000625767 PHEXP78562 749 aa15.78■□□□□ 0.12
CCNA1-203ENST00000625767 MC2RQ01718 297 aa15.78■□□□□ 0.12
CCNA1-203ENST00000625767 KIAA0040Q15053 153 aa15.78■□□□□ 0.12
CCNA1-203ENST00000625767 AP5B1Q2VPB7 878 aa15.78■□□□□ 0.12
CCNA1-203ENST00000625767 LSM12Q3MHD2 195 aaKnown RBP15.78■□□□□ 0.12
CCNA1-203ENST00000625767 NXNQ6DKJ4 435 aa15.78■□□□□ 0.12
CCNA1-203ENST00000625767 ABHD17CQ6PCB6 329 aa15.78■□□□□ 0.12
CCNA1-203ENST00000625767 OR8K5Q8NH50 307 aa15.78■□□□□ 0.12
CCNA1-203ENST00000625767 SMIM10Q96HG1 83 aa15.78■□□□□ 0.12
CCNA1-203ENST00000625767 EBPLQ9BY08 206 aa15.78■□□□□ 0.12
CCNA1-203ENST00000625767 FANCEQ9HB96 536 aa15.78■□□□□ 0.12
CCNA1-203ENST00000625767 LRTM1Q9HBL6 345 aa15.78■□□□□ 0.12
CCNA1-203ENST00000625767 PISDQ9UG56 409 aa15.78■□□□□ 0.12
CCNA1-203ENST00000625767 PPT2Q9UMR5 302 aa15.78■□□□□ 0.12
CCNA1-203ENST00000625767 G3BP2Q9UN86 482 aaKnown RBP15.78■□□□□ 0.12
CCNA1-203ENST00000625767 TMEM184BQ9Y519 407 aaPredicted RBP15.78■□□□□ 0.12
CCNA1-203ENST00000625767 POLR3HQ9Y535 204 aaPredicted RBP15.78■□□□□ 0.12
CCNA1-203ENST00000625767 SDK2Q58EX2 2172 aa15.78■□□□□ 0.12
CCNA1-203ENST00000625767 HYKKA2RU49 373 aa15.77■□□□□ 0.12
CCNA1-203ENST00000625767 FITM1A5D6W6 292 aa15.77■□□□□ 0.12
CCNA1-203ENST00000625767 TRPC5OSA6NMA1 111 aa15.77■□□□□ 0.12
CCNA1-203ENST00000625767 SEC22BO75396 215 aa15.77■□□□□ 0.12
CCNA1-203ENST00000625767 RSL1D1O76021 490 aaKnown RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms