RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 POU6F1Q14863 301 aa12.9□□□□□ -0.34
SNX1-214ENST00000625244 ODF2Q5BJF6 829 aa12.9□□□□□ -0.34
SNX1-214ENST00000625244 VN1R4Q7Z5H5 301 aa12.9□□□□□ -0.34
SNX1-214ENST00000625244 KIF18BQ86Y91 864 aa12.9□□□□□ -0.34
SNX1-214ENST00000625244 RHOT2Q8IXI1 618 aa12.9□□□□□ -0.34
SNX1-214ENST00000625244 ULK2Q8IYT8 1036 aa12.9□□□□□ -0.34
SNX1-214ENST00000625244 CYP4X1Q8N118 509 aa12.9□□□□□ -0.34
SNX1-214ENST00000625244 TMEM251Q8N6I4 163 aa12.9□□□□□ -0.34
SNX1-214ENST00000625244 NFAM1Q8NET5 270 aaPredicted RBP12.9□□□□□ -0.34
SNX1-214ENST00000625244 TNIP2Q8NFZ5 429 aa12.9□□□□□ -0.34
SNX1-214ENST00000625244 SKA2Q8WVK7 121 aaPredicted RBP12.9□□□□□ -0.34
SNX1-214ENST00000625244 CAPZA3Q96KX2 299 aa12.9□□□□□ -0.34
SNX1-214ENST00000625244 CARD6Q9BX69 1037 aa12.9□□□□□ -0.34
SNX1-214ENST00000625244 PACSIN1Q9BY11 444 aa12.9□□□□□ -0.34
SNX1-214ENST00000625244 SPATA7Q9P0W8 599 aa12.9□□□□□ -0.34
SNX1-214ENST00000625244 SPRR3Q9UBC9 169 aa12.9□□□□□ -0.34
SNX1-214ENST00000625244 TAC3Q9UHF0 121 aa12.9□□□□□ -0.34
SNX1-214ENST00000625244 FEZ2Q9UHY8 353 aaPredicted RBP12.9□□□□□ -0.34
SNX1-214ENST00000625244 NENFQ9UMX5 172 aa12.9□□□□□ -0.34
SNX1-214ENST00000625244 DRG1Q9Y295 367 aaKnown RBP12.9□□□□□ -0.34
SNX1-214ENST00000625244 EPN1Q9Y6I3 576 aaPredicted RBP12.9□□□□□ -0.34
SNX1-214ENST00000625244 ABCA1O95477 2261 aa12.9□□□□□ -0.35
SNX1-214ENST00000625244 SAGE2PA6NJ88 616 aa12.89□□□□□ -0.35
SNX1-214ENST00000625244 HACD1B0YJ81 288 aa12.89□□□□□ -0.35
SNX1-214ENST00000625244 KDM4EB2RXH2 506 aaPredicted RBP12.89□□□□□ -0.35
SNX1-214ENST00000625244 CES2O00748 559 aa12.89□□□□□ -0.35
SNX1-214ENST00000625244 ERGP11308 486 aa12.89□□□□□ -0.35
SNX1-214ENST00000625244 GABRA1P14867 456 aa12.89□□□□□ -0.35
SNX1-214ENST00000625244 ENDOUP21128 410 aaKnown RBP12.89□□□□□ -0.35
SNX1-214ENST00000625244 PSMA3P25788 255 aa12.89□□□□□ -0.35
SNX1-214ENST00000625244 MAN2A2P49641 1150 aa12.89□□□□□ -0.35
SNX1-214ENST00000625244 WNT3P56703 355 aa12.89□□□□□ -0.35
SNX1-214ENST00000625244 RELAQ04206 551 aa12.89□□□□□ -0.35
SNX1-214ENST00000625244 PRDX1Q06830 199 aaKnown RBP12.89□□□□□ -0.35
SNX1-214ENST00000625244 ICE2Q659A1 982 aa12.89□□□□□ -0.35
SNX1-214ENST00000625244 TMEM214Q6NUQ4 689 aaKnown RBP12.89□□□□□ -0.35
SNX1-214ENST00000625244 KIAA0408Q6ZU52 694 aa12.89□□□□□ -0.35
SNX1-214ENST00000625244 ADCK2Q7Z695 626 aa12.89□□□□□ -0.35
SNX1-214ENST00000625244 KIAA1328Q86T90 577 aa12.89□□□□□ -0.35
SNX1-214ENST00000625244 CCDC50Q8IVM0 306 aa12.89□□□□□ -0.35
SNX1-214ENST00000625244 FAM109AQ8N4B1 249 aa12.89□□□□□ -0.35
SNX1-214ENST00000625244 OR5T3Q8NGG3 340 aa12.89□□□□□ -0.35
SNX1-214ENST00000625244 SMPDL3AQ92484 453 aa12.89□□□□□ -0.35
SNX1-214ENST00000625244 SARAFQ96BY9 339 aa12.89□□□□□ -0.35
SNX1-214ENST00000625244 PIH1D1Q9NWS0 290 aaKnown RBP12.89□□□□□ -0.35
SNX1-214ENST00000625244 ADGRE2Q9UHX3 823 aa12.89□□□□□ -0.35
SNX1-214ENST00000625244 NPFFR2Q9Y5X5 522 aa12.89□□□□□ -0.35
SNX1-214ENST00000625244 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.89□□□□□ -0.352e-7■■■■□ 23.1
SNX1-214ENST00000625244 ATP6AP2A0A1C7CYW4 349 aa12.88□□□□□ -0.35
SNX1-214ENST00000625244 MROH6A6NGR9 719 aa12.88□□□□□ -0.35
SNX1-214ENST00000625244 ZNF860A6NHJ4 632 aa12.88□□□□□ -0.35
SNX1-214ENST00000625244 F8W8V4 182 aa12.88□□□□□ -0.35
SNX1-214ENST00000625244 SUSD5O60279 629 aa12.88□□□□□ -0.35
SNX1-214ENST00000625244 ATP6AP2O75787 350 aa12.88□□□□□ -0.35
SNX1-214ENST00000625244 CEACAM8P31997 349 aaPredicted RBP12.88□□□□□ -0.35
SNX1-214ENST00000625244 CCNFP41002 786 aa12.88□□□□□ -0.35
SNX1-214ENST00000625244 SORDQ00796 357 aa12.88□□□□□ -0.35
SNX1-214ENST00000625244 DMTNQ08495 405 aa12.88□□□□□ -0.35
SNX1-214ENST00000625244 PRPSAP1Q14558 356 aa12.88□□□□□ -0.35
SNX1-214ENST00000625244 KRTAP24-1Q3LI83 254 aa12.88□□□□□ -0.35
SNX1-214ENST00000625244 CCDC38Q502W7 563 aa12.88□□□□□ -0.35
SNX1-214ENST00000625244 ANKRD20A2Q5SQ80 823 aa12.88□□□□□ -0.35
SNX1-214ENST00000625244 NDUFAF5Q5TEU4 345 aa12.88□□□□□ -0.35
SNX1-214ENST00000625244 ANKRD20A1Q5TYW2 823 aa12.88□□□□□ -0.35
SNX1-214ENST00000625244 LRRC38Q5VT99 294 aa12.88□□□□□ -0.35
SNX1-214ENST00000625244 ANKRD20A3Q5VUR7 823 aa12.88□□□□□ -0.35
SNX1-214ENST00000625244 HEPHL1Q6MZM0 1159 aa12.88□□□□□ -0.35
SNX1-214ENST00000625244 ZCCHC10Q8TBK6 192 aa12.88□□□□□ -0.35
SNX1-214ENST00000625244 SMPDL3BQ92485 455 aa12.88□□□□□ -0.35
SNX1-214ENST00000625244 OR1F2PQ96R84 312 aa12.88□□□□□ -0.35
SNX1-214ENST00000625244 TSSK1BQ9BXA7 367 aa12.88□□□□□ -0.35
SNX1-214ENST00000625244 LDAHQ9H6V9 325 aa12.88□□□□□ -0.35
SNX1-214ENST00000625244 ANKHQ9HCJ1 492 aa12.88□□□□□ -0.35
SNX1-214ENST00000625244 UTP6Q9NYH9 597 aaKnown RBP12.88□□□□□ -0.35
SNX1-214ENST00000625244 ZNF629Q9UEG4 869 aaPredicted RBP12.88□□□□□ -0.35
SNX1-214ENST00000625244 ERVK-11Q9UQG0 969 aa12.88□□□□□ -0.35
SNX1-214ENST00000625244 PCDHA3Q9Y5H8 950 aa12.88□□□□□ -0.35
SNX1-214ENST00000625244 PCDHA13Q9Y5I0 950 aa12.88□□□□□ -0.35
SNX1-214ENST00000625244 ARHGAP21Q5T5U3 1957 aa12.88□□□□□ -0.35
SNX1-214ENST00000625244 TRBV11-1A0A0K0K1C0 115 aa12.87□□□□□ -0.35
SNX1-214ENST00000625244 A8MUA0 341 aa12.87□□□□□ -0.35
SNX1-214ENST00000625244 FHP07954 510 aa12.87□□□□□ -0.35
SNX1-214ENST00000625244 SSR4P51571 173 aa12.87□□□□□ -0.35
SNX1-214ENST00000625244 ZNF136P52737 540 aa12.87□□□□□ -0.35
SNX1-214ENST00000625244 SEMA3AQ14563 771 aa12.87□□□□□ -0.35
SNX1-214ENST00000625244 TMED2Q15363 201 aa12.87□□□□□ -0.35
SNX1-214ENST00000625244 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.87□□□□□ -0.35
SNX1-214ENST00000625244 C10orf62Q5T681 223 aaPredicted RBP12.87□□□□□ -0.35
SNX1-214ENST00000625244 KCT2Q8NC54 265 aa12.87□□□□□ -0.35
SNX1-214ENST00000625244 APCDD1LQ8NCL9 501 aa12.87□□□□□ -0.35
SNX1-214ENST00000625244 PPP1R14CQ8TAE6 165 aa12.87□□□□□ -0.35
SNX1-214ENST00000625244 GSDMBQ8TAX9 411 aa12.87□□□□□ -0.35
SNX1-214ENST00000625244 DACH2Q96NX9 599 aa12.87□□□□□ -0.35
SNX1-214ENST00000625244 ALS2CR12Q96Q35 445 aa12.87□□□□□ -0.35
SNX1-214ENST00000625244 CCL19Q99731 98 aa12.87□□□□□ -0.35
SNX1-214ENST00000625244 DDX56Q9NY93 547 aaKnown RBP12.87□□□□□ -0.35
SNX1-214ENST00000625244 TSR3Q9UJK0 312 aaKnown RBP12.87□□□□□ -0.35
SNX1-214ENST00000625244 FBXW2Q9UKT8 454 aa12.87□□□□□ -0.35
SNX1-214ENST00000625244 NAALAD2Q9Y3Q0 740 aa12.87□□□□□ -0.35
SNX1-214ENST00000625244 HYOU1Q9Y4L1 999 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms