RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 GSTM4Q03013 218 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 NOL9Q5SY16 702 aaKnown RBP8.63□□□□□ -1.03
VCL-206ENST00000623461 NBPF12Q5TAG4 269 aaPredicted RBP8.63□□□□□ -1.03
VCL-206ENST00000623461 MBOAT1Q6ZNC8 495 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 WDR53Q7Z5U6 358 aaPredicted RBP8.63□□□□□ -1.03
VCL-206ENST00000623461 LACC1Q8IV20 430 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 GHDCQ8N2G8 530 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 SYNPOQ8N3V7 929 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 ADAMTS16Q8TE57 1224 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 TXNDC15Q96J42 360 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 KDM3BQ7LBC6 1761 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 ARFGEF2Q9Y6D5 1785 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 TEX13CA0A0J9YWL9 993 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 SMIM28A0A1B0GU29 152 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 TRIM64A6NGJ6 449 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 TRIM64BA6NI03 449 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 F5H0A9 414 aaPredicted RBP8.63□□□□□ -1.03
VCL-206ENST00000623461 J3QLW9 94 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 NME4O00746 187 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 ADAMTS3O15072 1205 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 TSPAN1O60635 241 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 ZNF19P17023 458 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 GRK6P43250 576 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 ALDH3B2P48448 385 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 PLA2G4EQ3MJ16 856 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 SIRPB2Q5JXA9 342 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 SLC44A3Q8N4M1 653 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 BEND7Q8N7W2 519 aaPredicted RBP8.63□□□□□ -1.03
VCL-206ENST00000623461 OR5H6Q8NGV6 325 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 KCTD13Q8WZ19 329 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 PIP5K1AQ99755 562 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 PCDHGB2Q9Y5G2 931 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 FAM170BA6NMN3 283 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 ZNF670-ZNF695F2Z2N8 137 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 IFNA17P01571 189 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 ASGR1P07306 291 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 SPARCP09486 303 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 GIMD1P0DJR0 217 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 HOXA10P31260 410 aaPredicted RBP8.63□□□□□ -1.03
VCL-206ENST00000623461 MAN2A2P49641 1150 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 ATXN7L2Q5T6C5 722 aaPredicted RBP8.63□□□□□ -1.03
VCL-206ENST00000623461 NAPRTQ6XQN6 538 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 OR2L5Q8NG80 312 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 GRIN3AQ8TCU5 1115 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 AHCYL2Q96HN2 611 aaKnown RBP8.63□□□□□ -1.03
VCL-206ENST00000623461 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.63□□□□□ -1.031e-12■■■■□ 19.7
VCL-206ENST00000623461 DPEP3Q9H4B8 488 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 NLGN3Q9NZ94 848 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 SLIT2O94813 1529 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 A0A075B6Q4 140 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 GPR25O00155 361 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 SULT1C2O00338 296 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 RBBP9O75884 186 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 SCGB2B2Q4G0G5 96 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 ESCO2Q56NI9 601 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 TNFAIP8L2Q6P589 184 aaPredicted RBP8.63□□□□□ -1.03
VCL-206ENST00000623461 ZNF676Q8N7Q3 588 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 CD300LFQ8TDQ1 290 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 PSMG2Q969U7 264 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 MUL1Q969V5 352 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 CCDC120Q96HB5 630 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 ARL5BQ96KC2 179 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 CACNG6Q9BXT2 260 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 CDH7Q9ULB5 785 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 COL14A1Q05707 1796 aaKnown RBP8.63□□□□□ -1.03
VCL-206ENST00000623461 TTC34A8MYJ7 566 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 ICMTO60725 284 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 RENP00797 406 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 VIPP01282 170 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 OPN1SWP03999 348 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 CD6P30203 668 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 DIO3P55073 304 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 MRPS6P82932 125 aaKnown RBP8.63□□□□□ -1.03
VCL-206ENST00000623461 GRB7Q14451 532 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 FNDC3BQ53EP0 1204 aaKnown RBP8.63□□□□□ -1.03
VCL-206ENST00000623461 METTL11BQ5VVY1 283 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 ATAD1Q8NBU5 361 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 L3HYPDHQ96EM0 354 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 KCNA7Q96RP8 456 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 MED1Q15648 1581 aaPredicted RBP8.62□□□□□ -1.03
VCL-206ENST00000623461 A0A1B0GVM2 712 aa8.62□□□□□ -1.03
VCL-206ENST00000623461 CRISP1P54107 249 aa8.62□□□□□ -1.03
VCL-206ENST00000623461 OR4D2P58180 307 aa8.62□□□□□ -1.03
VCL-206ENST00000623461 VAMP2P63027 116 aa8.62□□□□□ -1.03
VCL-206ENST00000623461 CDK10Q15131 360 aa8.62□□□□□ -1.03
VCL-206ENST00000623461 UNC50Q53HI1 259 aa8.62□□□□□ -1.03
VCL-206ENST00000623461 PGM2L1Q6PCE3 622 aa8.62□□□□□ -1.03
VCL-206ENST00000623461 GALNT7Q86SF2 657 aa8.62□□□□□ -1.03
VCL-206ENST00000623461 ZNF563Q8TA94 476 aa8.62□□□□□ -1.03
VCL-206ENST00000623461 TRIB3Q96RU7 358 aa8.62□□□□□ -1.03
VCL-206ENST00000623461 ACBD6Q9BR61 282 aa8.62□□□□□ -1.03
VCL-206ENST00000623461 EFCAB11Q9BUY7 163 aa8.62□□□□□ -1.03
VCL-206ENST00000623461 PIK3C2AO00443 1686 aa8.62□□□□□ -1.03
VCL-206ENST00000623461 RETP07949 1114 aa8.62□□□□□ -1.03
VCL-206ENST00000623461 CKMT1AP12532 417 aa8.62□□□□□ -1.03
VCL-206ENST00000623461 RAB3BP20337 219 aa8.62□□□□□ -1.03
VCL-206ENST00000623461 GPR19Q15760 415 aa8.62□□□□□ -1.03
VCL-206ENST00000623461 SOWAHAQ2M3V2 549 aa8.62□□□□□ -1.03
VCL-206ENST00000623461 UAP1L1Q3KQV9 507 aa8.62□□□□□ -1.03
VCL-206ENST00000623461 NXPE1Q8N323 547 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms