RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 SEPT8Q92599 483 aa4.33□□□□□ -1.72
CPNE3-213ENST00000622183 INPP4AQ96PE3 977 aaPredicted RBP4.33□□□□□ -1.72
CPNE3-213ENST00000622183 NODALQ96S42 347 aa4.33□□□□□ -1.72
CPNE3-213ENST00000622183 RUFY1Q96T51 708 aa4.33□□□□□ -1.72
CPNE3-213ENST00000622183 DDX50Q9BQ39 737 aaKnown RBP4.33□□□□□ -1.72
CPNE3-213ENST00000622183 LRRC2Q9BYS8 371 aa4.33□□□□□ -1.72
CPNE3-213ENST00000622183 DPEP2Q9H4A9 486 aa4.33□□□□□ -1.72
CPNE3-213ENST00000622183 MAN2C1Q9NTJ4 1040 aa4.33□□□□□ -1.72
CPNE3-213ENST00000622183 C2orf42Q9NWW7 574 aa4.33□□□□□ -1.72
CPNE3-213ENST00000622183 TMOD3Q9NYL9 352 aa4.33□□□□□ -1.72
CPNE3-213ENST00000622183 FETUBQ9UGM5 382 aa4.33□□□□□ -1.72
CPNE3-213ENST00000622183 ODF2LQ9ULJ1 636 aa4.33□□□□□ -1.72
CPNE3-213ENST00000622183 TCF19Q9Y242 345 aa4.33□□□□□ -1.72
CPNE3-213ENST00000622183 DOCK7Q96N67 2140 aa4.33□□□□□ -1.72
CPNE3-213ENST00000622183 TRBV2A0A0J9YWF9 115 aa4.32□□□□□ -1.72
CPNE3-213ENST00000622183 SYCE3A1L190 88 aa4.32□□□□□ -1.72
CPNE3-213ENST00000622183 RTCAO00442 366 aaKnown RBP4.32□□□□□ -1.72
CPNE3-213ENST00000622183 CYTIPO60759 359 aa4.32□□□□□ -1.72
CPNE3-213ENST00000622183 SAP30O75446 220 aa4.32□□□□□ -1.72
CPNE3-213ENST00000622183 PRKAR1AP10644 381 aa4.32□□□□□ -1.72
CPNE3-213ENST00000622183 AADACP22760 399 aa4.32□□□□□ -1.72
CPNE3-213ENST00000622183 OR3A2P47893 321 aa4.32□□□□□ -1.72
CPNE3-213ENST00000622183 CASP9P55211 416 aa4.32□□□□□ -1.72
CPNE3-213ENST00000622183 SP3Q02447 781 aa4.32□□□□□ -1.72
CPNE3-213ENST00000622183 TSTA3Q13630 321 aaPredicted RBP4.32□□□□□ -1.72
CPNE3-213ENST00000622183 ITGA9Q13797 1035 aa4.32□□□□□ -1.72
CPNE3-213ENST00000622183 CD164L2Q6UWJ8 174 aa4.32□□□□□ -1.72
CPNE3-213ENST00000622183 B3GLCTQ6Y288 498 aa4.32□□□□□ -1.72
CPNE3-213ENST00000622183 C18orf65Q6ZTR6 163 aa4.32□□□□□ -1.72
CPNE3-213ENST00000622183 LACC1Q8IV20 430 aa4.32□□□□□ -1.72
CPNE3-213ENST00000622183 THEM5Q8N1Q8 247 aa4.32□□□□□ -1.72
CPNE3-213ENST00000622183 CCDC185Q8N715 623 aa4.32□□□□□ -1.72
CPNE3-213ENST00000622183 TMEM178AQ8NBL3 297 aa4.32□□□□□ -1.72
CPNE3-213ENST00000622183 URGCPQ8TCY9 931 aa4.32□□□□□ -1.72
CPNE3-213ENST00000622183 ULK4Q96C45 1275 aa4.32□□□□□ -1.72
CPNE3-213ENST00000622183 NEDD4LQ96PU5 975 aa4.32□□□□□ -1.72
CPNE3-213ENST00000622183 NAP1L3Q99457 506 aaPredicted RBP4.32□□□□□ -1.72
CPNE3-213ENST00000622183 TDRD1Q9BXT4 1180 aaKnown RBP4.32□□□□□ -1.72
CPNE3-213ENST00000622183 WWTR1Q9GZV5 400 aa4.32□□□□□ -1.72
CPNE3-213ENST00000622183 TMEM245Q9H330 911 aa4.32□□□□□ -1.72
CPNE3-213ENST00000622183 HACD3Q9P035 362 aa4.32□□□□□ -1.72
CPNE3-213ENST00000622183 TRIM10Q9UDY6 481 aa4.32□□□□□ -1.72
CPNE3-213ENST00000622183 ICAM5Q9UMF0 924 aa4.32□□□□□ -1.72
CPNE3-213ENST00000622183 SATB2Q9UPW6 733 aa4.32□□□□□ -1.72
CPNE3-213ENST00000622183 DHX29Q7Z478 1369 aaKnown RBP4.31□□□□□ -1.72
CPNE3-213ENST00000622183 CCDC162PA2VCL2 907 aa4.31□□□□□ -1.72
CPNE3-213ENST00000622183 SERINC4A6NH21 518 aa4.31□□□□□ -1.72
CPNE3-213ENST00000622183 SLC15A5A6NIM6 579 aa4.31□□□□□ -1.72
CPNE3-213ENST00000622183 ZNF732B4DXR9 585 aa4.31□□□□□ -1.72
CPNE3-213ENST00000622183 MLNRO43193 412 aa4.31□□□□□ -1.72
CPNE3-213ENST00000622183 SEC22BO75396 215 aa4.31□□□□□ -1.72
CPNE3-213ENST00000622183 GAS8O95995 478 aa4.31□□□□□ -1.72
CPNE3-213ENST00000622183 MMP10P09238 476 aa4.31□□□□□ -1.72
CPNE3-213ENST00000622183 FERP16591 822 aa4.31□□□□□ -1.72
CPNE3-213ENST00000622183 CDKN1AP38936 164 aa4.31□□□□□ -1.72
CPNE3-213ENST00000622183 LEPRP48357 1165 aaKnown RBP4.31□□□□□ -1.72
CPNE3-213ENST00000622183 BPIFB3P59826 476 aa4.31□□□□□ -1.72
CPNE3-213ENST00000622183 KRTAP10-11P60412 298 aa4.31□□□□□ -1.72
CPNE3-213ENST00000622183 TRA2AQ13595 282 aaKnown RBP eCLIP4.31□□□□□ -1.72
CPNE3-213ENST00000622183 CDH18Q13634 790 aa4.31□□□□□ -1.72
CPNE3-213ENST00000622183 EFTUD2Q15029 972 aaKnown RBP eCLIP4.31□□□□□ -1.726e-7■■■□□ 16.6
CPNE3-213ENST00000622183 DUSP5Q16690 384 aa4.31□□□□□ -1.72
CPNE3-213ENST00000622183 ZNF776Q68DI1 518 aaPredicted RBP4.31□□□□□ -1.72
CPNE3-213ENST00000622183 TRMT11Q7Z4G4 463 aaKnown RBP4.31□□□□□ -1.72
CPNE3-213ENST00000622183 TEX26Q8N6G2 289 aa4.31□□□□□ -1.72
CPNE3-213ENST00000622183 TCEANCQ8N8B7 351 aa4.31□□□□□ -1.72
CPNE3-213ENST00000622183 SIDT2Q8NBJ9 832 aaKnown RBP4.31□□□□□ -1.72
CPNE3-213ENST00000622183 SLC13A3Q8WWT9 602 aa4.31□□□□□ -1.72
CPNE3-213ENST00000622183 HAS2Q92819 552 aa4.31□□□□□ -1.72
CPNE3-213ENST00000622183 DTD2Q96FN9 168 aa4.31□□□□□ -1.72
CPNE3-213ENST00000622183 PRAC1Q96KF2 57 aa4.31□□□□□ -1.72
CPNE3-213ENST00000622183 LURAP1Q96LR2 239 aa4.31□□□□□ -1.72
CPNE3-213ENST00000622183 ZNF560Q96MR9 790 aa4.31□□□□□ -1.72
CPNE3-213ENST00000622183 GUCD1Q96NT3 240 aa4.31□□□□□ -1.72
CPNE3-213ENST00000622183 FAM213AQ9BRX8 229 aa4.31□□□□□ -1.72
CPNE3-213ENST00000622183 NYXQ9GZU5 481 aa4.31□□□□□ -1.72
CPNE3-213ENST00000622183 ABCG8Q9H221 673 aa4.31□□□□□ -1.72
CPNE3-213ENST00000622183 ZCCHC3Q9NUD5 404 aaKnown RBP4.31□□□□□ -1.72
CPNE3-213ENST00000622183 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.31□□□□□ -1.72
CPNE3-213ENST00000622183 POLKQ9UBT6 870 aa4.31□□□□□ -1.72
CPNE3-213ENST00000622183 RPH3AQ9Y2J0 694 aaPredicted RBP4.31□□□□□ -1.72
CPNE3-213ENST00000622183 SELENOKQ9Y6D0 94 aa4.31□□□□□ -1.72
CPNE3-213ENST00000622183 A0A087WW49 117 aa4.3□□□□□ -1.72
CPNE3-213ENST00000622183 A0A087WZ39 114 aa4.3□□□□□ -1.72
CPNE3-213ENST00000622183 NKX6-3A6NJ46 265 aa4.3□□□□□ -1.72
CPNE3-213ENST00000622183 SLCO1B7G3V0H7 640 aa4.3□□□□□ -1.72
CPNE3-213ENST00000622183 CHUKO15111 745 aa4.3□□□□□ -1.72
CPNE3-213ENST00000622183 CXCL14O95715 111 aa4.3□□□□□ -1.72
CPNE3-213ENST00000622183 UMODP07911 640 aa4.3□□□□□ -1.72
CPNE3-213ENST00000622183 HMBSP08397 361 aa4.3□□□□□ -1.72
CPNE3-213ENST00000622183 PATE4P0C8F1 98 aa4.3□□□□□ -1.72
CPNE3-213ENST00000622183 ODC1P11926 461 aa4.3□□□□□ -1.72
CPNE3-213ENST00000622183 CEACAM1P13688 526 aa4.3□□□□□ -1.72
CPNE3-213ENST00000622183 GAP43P17677 238 aa4.3□□□□□ -1.72
CPNE3-213ENST00000622183 CYP3A5P20815 502 aa4.3□□□□□ -1.72
CPNE3-213ENST00000622183 IL10P22301 178 aa4.3□□□□□ -1.72
CPNE3-213ENST00000622183 AHCYP23526 432 aa4.3□□□□□ -1.72
CPNE3-213ENST00000622183 MAP2K2P36507 400 aa4.3□□□□□ -1.72
CPNE3-213ENST00000622183 SLC1A3P43003 542 aa4.3□□□□□ -1.72
CPNE3-213ENST00000622183 LUMP51884 338 aaPredicted RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms