RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 RPS9P46781 194 aaKnown RBP8.91□□□□□ -0.98
GGA3-223ENST00000621870 GSK3BP49841 420 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 CTSCP53634 463 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 RPS15P62841 145 aaKnown RBP8.91□□□□□ -0.98
GGA3-223ENST00000621870 RPP38P78345 283 aaKnown RBP8.91□□□□□ -0.98
GGA3-223ENST00000621870 CD47Q08722 323 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 KCNC3Q14003 757 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 IER5LQ5T953 404 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 KLHL24Q6TFL4 600 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 KDELC1Q6UW63 502 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 P4HA3Q7Z4N8 544 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 GPR149Q86SP6 731 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 NATD1Q8N6N6 113 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 AMER2Q8N7J2 671 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 CANT1Q8WVQ1 401 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 CENPNQ96H22 339 aaPredicted RBP8.91□□□□□ -0.98
GGA3-223ENST00000621870 ZFRQ96KR1 1074 aaKnown RBP8.91□□□□□ -0.98
GGA3-223ENST00000621870 RANBP9Q96S59 729 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 RBM4BQ9BQ04 359 aaKnown RBP8.91□□□□□ -0.98
GGA3-223ENST00000621870 RBM4Q9BWF3 364 aaKnown RBP8.91□□□□□ -0.98
GGA3-223ENST00000621870 SPRTNQ9H040 489 aaPredicted RBP8.91□□□□□ -0.98
GGA3-223ENST00000621870 MUC13Q9H3R2 512 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 PLGRKTQ9HBL7 147 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 SDHAF3Q9NRP4 125 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 NHSQ6T4R5 1651 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 A0A1W2PP18 115 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 TRBC2A0A5B9 178 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 E7ENX8 843 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 GJB3O75712 270 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 ABLIM3O94929 683 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 ANGPTL1O95841 491 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 IL3P08700 152 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 MPC1LP0DKB6 136 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 ZNF823P16415 610 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 XRCC1P18887 633 aaPredicted RBP8.91□□□□□ -0.98
GGA3-223ENST00000621870 SRP54P61011 504 aaKnown RBP8.91□□□□□ -0.98
GGA3-223ENST00000621870 ABATP80404 500 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 MRPS21P82921 87 aaKnown RBP8.91□□□□□ -0.98
GGA3-223ENST00000621870 DLG1Q12959 904 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 MPP2Q14168 576 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 LACTB2Q53H82 288 aaPredicted RBP8.91□□□□□ -0.98
GGA3-223ENST00000621870 AHSA2Q719I0 299 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 ATCAYQ86WG3 371 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 ANKRD27Q96NW4 1050 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 TRAPPC9Q96Q05 1148 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 UBE2ZQ9H832 354 aaPredicted RBP8.91□□□□□ -0.98
GGA3-223ENST00000621870 IL1RAPQ9NPH3 570 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 BRD7Q9NPI1 651 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 OARD1Q9Y530 152 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 MAU2Q9Y6X3 613 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 KLHL33A6NCF5 533 aa8.9□□□□□ -0.98
GGA3-223ENST00000621870 A6NCN8 305 aa8.9□□□□□ -0.98
GGA3-223ENST00000621870 PRDX6P30041 224 aa8.9□□□□□ -0.98
GGA3-223ENST00000621870 RANBP1P43487 201 aa8.9□□□□□ -0.98
GGA3-223ENST00000621870 KCNC1P48547 511 aa8.9□□□□□ -0.98
GGA3-223ENST00000621870 OLR1P78380 273 aa8.9□□□□□ -0.98
GGA3-223ENST00000621870 PTPRRQ15256 657 aa8.9□□□□□ -0.98
GGA3-223ENST00000621870 DUOXA1Q1HG43 343 aa8.9□□□□□ -0.98
GGA3-223ENST00000621870 KHDC1Q4VXA5 237 aaKnown RBP8.9□□□□□ -0.98
GGA3-223ENST00000621870 LIPJQ5W064 366 aa8.9□□□□□ -0.98
GGA3-223ENST00000621870 FRRS1Q6ZNA5 592 aa8.9□□□□□ -0.98
GGA3-223ENST00000621870 SYVN1Q86TM6 617 aa8.9□□□□□ -0.98
GGA3-223ENST00000621870 OR2A12Q8NGT7 310 aa8.9□□□□□ -0.98
GGA3-223ENST00000621870 SNRNP27Q8WVK2 155 aaKnown RBP8.9□□□□□ -0.98
GGA3-223ENST00000621870 ISG20Q96AZ6 181 aaKnown RBP8.9□□□□□ -0.98
GGA3-223ENST00000621870 DNAJA3Q96EY1 480 aa8.9□□□□□ -0.98
GGA3-223ENST00000621870 DTD2Q96FN9 168 aa8.9□□□□□ -0.98
GGA3-223ENST00000621870 PEX11GQ96HA9 241 aa8.9□□□□□ -0.98
GGA3-223ENST00000621870 KCNC2Q96PR1 638 aa8.9□□□□□ -0.98
GGA3-223ENST00000621870 RTP3Q9BQQ7 232 aa8.9□□□□□ -0.98
GGA3-223ENST00000621870 SYT11Q9BT88 431 aa8.9□□□□□ -0.98
GGA3-223ENST00000621870 EBF2Q9HAK2 575 aa8.9□□□□□ -0.98
GGA3-223ENST00000621870 FAM120CQ9NX05 1096 aaKnown RBP8.9□□□□□ -0.98
GGA3-223ENST00000621870 SMPD3Q9NY59 655 aaPredicted RBP8.9□□□□□ -0.98
GGA3-223ENST00000621870 TAS2R9Q9NYW1 312 aa8.9□□□□□ -0.98
GGA3-223ENST00000621870 PDE10AQ9Y233 779 aa8.9□□□□□ -0.98
GGA3-223ENST00000621870 PTGDR2Q9Y5Y4 395 aa8.9□□□□□ -0.98
GGA3-223ENST00000621870 ZNF726A6NNF4 738 aa8.9□□□□□ -0.98
GGA3-223ENST00000621870 CAPN14A8MX76 684 aa8.9□□□□□ -0.98
GGA3-223ENST00000621870 MAGEB3O15480 346 aa8.9□□□□□ -0.98
GGA3-223ENST00000621870 AGR2O95994 175 aa8.9□□□□□ -0.98
GGA3-223ENST00000621870 PIK3CBP42338 1070 aa8.9□□□□□ -0.98
GGA3-223ENST00000621870 MTTPP55157 894 aa8.9□□□□□ -0.98
GGA3-223ENST00000621870 GRM7Q14831 915 aa8.9□□□□□ -0.98
GGA3-223ENST00000621870 NSDHLQ15738 373 aa8.9□□□□□ -0.98
GGA3-223ENST00000621870 CDKN3Q16667 212 aa8.9□□□□□ -0.98
GGA3-223ENST00000621870 NDUFAF6Q330K2 333 aa8.9□□□□□ -0.98
GGA3-223ENST00000621870 C12orf40Q86WS4 652 aa8.9□□□□□ -0.98
GGA3-223ENST00000621870 SCML4Q8N228 414 aa8.9□□□□□ -0.98
GGA3-223ENST00000621870 MDGA1Q8NFP4 955 aa8.9□□□□□ -0.98
GGA3-223ENST00000621870 OR56A1Q8NGH5 318 aa8.9□□□□□ -0.98
GGA3-223ENST00000621870 DNAJB8Q8NHS0 232 aa8.9□□□□□ -0.98
GGA3-223ENST00000621870 NFKBIDQ8NI38 313 aa8.9□□□□□ -0.98
GGA3-223ENST00000621870 LINC01599Q8WXQ3 324 aa8.9□□□□□ -0.98
GGA3-223ENST00000621870 GFM1Q96RP9 751 aaKnown RBP8.9□□□□□ -0.98
GGA3-223ENST00000621870 BCL2L14Q9BZR8 327 aa8.9□□□□□ -0.98
GGA3-223ENST00000621870 REEP4Q9H6H4 257 aa8.9□□□□□ -0.98
GGA3-223ENST00000621870 PNPLA3Q9NST1 481 aa8.9□□□□□ -0.98
GGA3-223ENST00000621870 ANKMY1Q9P2S6 941 aa8.9□□□□□ -0.98
GGA3-223ENST00000621870 ATXN10Q9UBB4 475 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms