RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 IL1RNP18510 177 aa17.64■□□□□ 0.41
CIRBP-245ENST00000621399 WT1P19544 449 aaPredicted RBP17.64■□□□□ 0.41
CIRBP-245ENST00000621399 FBLP22087 321 aaKnown RBP17.64■□□□□ 0.41
CIRBP-245ENST00000621399 HPDP32754 393 aaPredicted RBP17.64■□□□□ 0.41
CIRBP-245ENST00000621399 RAB8AP61006 207 aa17.64■□□□□ 0.41
CIRBP-245ENST00000621399 NAA20P61599 178 aa17.64■□□□□ 0.41
CIRBP-245ENST00000621399 ASPHQ12797 758 aa17.64■□□□□ 0.41
CIRBP-245ENST00000621399 LCP2Q13094 533 aa17.64■□□□□ 0.41
CIRBP-245ENST00000621399 DDX39BQ13838 428 aaKnown RBP17.64■□□□□ 0.41
CIRBP-245ENST00000621399 HERC3Q15034 1050 aa17.64■□□□□ 0.41
CIRBP-245ENST00000621399 ZRSR2Q15696 482 aaKnown RBP17.64■□□□□ 0.41
CIRBP-245ENST00000621399 TTC19Q6DKK2 380 aaPredicted RBP17.64■□□□□ 0.41
CIRBP-245ENST00000621399 OVCH1Q7RTY7 1134 aa17.64■□□□□ 0.41
CIRBP-245ENST00000621399 PRSS41Q7RTY9 318 aa17.64■□□□□ 0.41
CIRBP-245ENST00000621399 ZSCAN1Q8NBB4 408 aa17.64■□□□□ 0.41
CIRBP-245ENST00000621399 ZNF473Q8WTR7 871 aaKnown RBP17.64■□□□□ 0.41
CIRBP-245ENST00000621399 SLC45A3Q96JT2 553 aa17.64■□□□□ 0.41
CIRBP-245ENST00000621399 YIPF2Q9BWQ6 316 aa17.64■□□□□ 0.41
CIRBP-245ENST00000621399 FAM117AQ9C073 453 aa17.64■□□□□ 0.41
CIRBP-245ENST00000621399 GSTO2Q9H4Y5 243 aa17.64■□□□□ 0.41
CIRBP-245ENST00000621399 KLHL31Q9H511 634 aa17.64■□□□□ 0.41
CIRBP-245ENST00000621399 ACTL8Q9H568 366 aa17.64■□□□□ 0.41
CIRBP-245ENST00000621399 VIPAS39Q9H9C1 493 aa17.64■□□□□ 0.41
CIRBP-245ENST00000621399 CPNE5Q9HCH3 593 aa17.64■□□□□ 0.41
CIRBP-245ENST00000621399 ADGRE2Q9UHX3 823 aa17.64■□□□□ 0.41
CIRBP-245ENST00000621399 STK38LQ9Y2H1 464 aa17.64■□□□□ 0.41
CIRBP-245ENST00000621399 NAALAD2Q9Y3Q0 740 aa17.64■□□□□ 0.41
CIRBP-245ENST00000621399 PCDHGA6Q9Y5G7 932 aa17.64■□□□□ 0.41
CIRBP-245ENST00000621399 MRPS18BQ9Y676 258 aaKnown RBP17.64■□□□□ 0.41
CIRBP-245ENST00000621399 UQCRHLA0A096LP55 91 aa17.63■□□□□ 0.41
CIRBP-245ENST00000621399 A0A1B0GTL3 188 aa17.63■□□□□ 0.41
CIRBP-245ENST00000621399 LRIT2A6NDA9 550 aa17.63■□□□□ 0.41
CIRBP-245ENST00000621399 H0YIG0 161 aa17.63■□□□□ 0.41
CIRBP-245ENST00000621399 SGK494L7N484 410 aa17.63■□□□□ 0.41
CIRBP-245ENST00000621399 FFAR3O14843 346 aa17.63■□□□□ 0.41
CIRBP-245ENST00000621399 GPR42O15529 346 aa17.63■□□□□ 0.41
CIRBP-245ENST00000621399 TRIM13O60858 407 aa17.63■□□□□ 0.41
CIRBP-245ENST00000621399 KLHL18O94889 574 aa17.63■□□□□ 0.41
CIRBP-245ENST00000621399 NSA2O95478 260 aaKnown RBP17.63■□□□□ 0.41
CIRBP-245ENST00000621399 UQCRHP07919 91 aa17.63■□□□□ 0.41
CIRBP-245ENST00000621399 ALDH3A1P30838 453 aa17.63■□□□□ 0.41
CIRBP-245ENST00000621399 MAGOHP61326 146 aaKnown RBP17.63■□□□□ 0.41
CIRBP-245ENST00000621399 RPS18P62269 152 aaKnown RBP17.63■□□□□ 0.41
CIRBP-245ENST00000621399 DSG2Q14126 1118 aa17.63■□□□□ 0.41
CIRBP-245ENST00000621399 DEFB134Q4QY38 66 aa17.63■□□□□ 0.41
CIRBP-245ENST00000621399 GPRIN3Q6ZVF9 776 aa17.63■□□□□ 0.41
CIRBP-245ENST00000621399 COX15Q7KZN9 410 aa17.63■□□□□ 0.41
CIRBP-245ENST00000621399 AFAP1L2Q8N4X5 818 aa17.63■□□□□ 0.41
CIRBP-245ENST00000621399 HUS1BQ8NHY5 278 aa17.63■□□□□ 0.41
CIRBP-245ENST00000621399 UTP15Q8TED0 518 aaKnown RBP17.63■□□□□ 0.41
CIRBP-245ENST00000621399 SREK1Q8WXA9 508 aaKnown RBP17.63■□□□□ 0.41
CIRBP-245ENST00000621399 STARD8Q92502 1023 aa17.63■□□□□ 0.41
CIRBP-245ENST00000621399 FKBP10Q96AY3 582 aa17.63■□□□□ 0.41
CIRBP-245ENST00000621399 ZNF382Q96SR6 550 aa17.63■□□□□ 0.41
CIRBP-245ENST00000621399 MTERF1Q99551 399 aaKnown RBP17.63■□□□□ 0.41
CIRBP-245ENST00000621399 MECRQ9BV79 373 aa17.63■□□□□ 0.41
CIRBP-245ENST00000621399 REXO4Q9GZR2 422 aaKnown RBP17.63■□□□□ 0.41
CIRBP-245ENST00000621399 TRPC4Q9UBN4 977 aa17.63■□□□□ 0.41
CIRBP-245ENST00000621399 PADI2Q9Y2J8 665 aa17.63■□□□□ 0.41
CIRBP-245ENST00000621399 TSC22D4Q9Y3Q8 395 aa17.63■□□□□ 0.41
CIRBP-245ENST00000621399 ZZEF1O43149 2961 aa17.63■□□□□ 0.41
CIRBP-245ENST00000621399 TM9SF1O15321 606 aa17.62■□□□□ 0.41
CIRBP-245ENST00000621399 OR4F21O95013 312 aa17.62■□□□□ 0.41
CIRBP-245ENST00000621399 ZWINTO95229 277 aa17.62■□□□□ 0.41
CIRBP-245ENST00000621399 TGFB1P01137 390 aa17.62■□□□□ 0.41
CIRBP-245ENST00000621399 ALBP02768 609 aa17.62■□□□□ 0.41
CIRBP-245ENST00000621399 HNRNPH1P31943 449 aaKnown RBP17.62■□□□□ 0.41
CIRBP-245ENST00000621399 PIK3CBP42338 1070 aa17.62■□□□□ 0.41
CIRBP-245ENST00000621399 ETV4P43268 484 aa17.62■□□□□ 0.41
CIRBP-245ENST00000621399 NEK2P51955 445 aa17.62■□□□□ 0.41
CIRBP-245ENST00000621399 PKNOX1P55347 436 aa17.62■□□□□ 0.41
CIRBP-245ENST00000621399 SKP1P63208 163 aa17.62■□□□□ 0.41
CIRBP-245ENST00000621399 PHEXP78562 749 aa17.62■□□□□ 0.41
CIRBP-245ENST00000621399 VAC14Q08AM6 782 aa17.62■□□□□ 0.41
CIRBP-245ENST00000621399 IFT88Q13099 833 aa17.62■□□□□ 0.41
CIRBP-245ENST00000621399 GGTA1PQ4G0N0 100 aa17.62■□□□□ 0.41
CIRBP-245ENST00000621399 NIPAL1Q6NVV3 410 aa17.62■□□□□ 0.41
CIRBP-245ENST00000621399 MRPL14Q6P1L8 145 aaKnown RBP17.62■□□□□ 0.41
CIRBP-245ENST00000621399 LETMD1Q6P1Q0 360 aa17.62■□□□□ 0.41
CIRBP-245ENST00000621399 C19orf48Q6RUI8 117 aa17.62■□□□□ 0.41
CIRBP-245ENST00000621399 FRMD7Q6ZUT3 714 aa17.62■□□□□ 0.41
CIRBP-245ENST00000621399 CHSY3Q70JA7 882 aa17.62■□□□□ 0.41
CIRBP-245ENST00000621399 SYVN1Q86TM6 617 aa17.62■□□□□ 0.41
CIRBP-245ENST00000621399 PDSS2Q86YH6 399 aa17.62■□□□□ 0.41
CIRBP-245ENST00000621399 GOLGA6L1Q8N7Z2 621 aa17.62■□□□□ 0.41
CIRBP-245ENST00000621399 WDR20Q8TBZ3 569 aa17.62■□□□□ 0.41
CIRBP-245ENST00000621399 GAL3ST3Q96A11 431 aa17.62■□□□□ 0.41
CIRBP-245ENST00000621399 TLCD1Q96CP7 247 aa17.62■□□□□ 0.41
CIRBP-245ENST00000621399 MTFMTQ96DP5 389 aaKnown RBP17.62■□□□□ 0.41
CIRBP-245ENST00000621399 MS4A6EQ96DS6 147 aa17.62■□□□□ 0.41
CIRBP-245ENST00000621399 CMTM7Q96FZ5 175 aa17.62■□□□□ 0.41
CIRBP-245ENST00000621399 FAR2Q96K12 515 aa17.62■□□□□ 0.41
CIRBP-245ENST00000621399 F2RL3Q96RI0 385 aa17.62■□□□□ 0.41
CIRBP-245ENST00000621399 AICDAQ9GZX7 198 aa17.62■□□□□ 0.41
CIRBP-245ENST00000621399 MID1IP1Q9NPA3 183 aa17.62■□□□□ 0.41
CIRBP-245ENST00000621399 CTSFQ9UBX1 484 aa17.62■□□□□ 0.41
CIRBP-245ENST00000621399 ZNF282Q9UDV7 671 aaPredicted RBP17.62■□□□□ 0.41
CIRBP-245ENST00000621399 TRPS1Q9UHF7 1281 aa17.62■□□□□ 0.41
CIRBP-245ENST00000621399 TCFL5Q9UL49 500 aa17.62■□□□□ 0.41
CIRBP-245ENST00000621399 MDC1Q14676 2089 aaKnown RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms