RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 RD3Q7Z3Z2 195 aa11.9□□□□□ -0.5
CIITA-212ENST00000618207 PDZD3Q86UT5 571 aa11.9□□□□□ -0.5
CIITA-212ENST00000618207 C17orf64Q86WR6 236 aa11.9□□□□□ -0.5
CIITA-212ENST00000618207 GALNT13Q8IUC8 556 aa11.9□□□□□ -0.5
CIITA-212ENST00000618207 CLVS1Q8IUQ0 354 aaPredicted RBP11.9□□□□□ -0.5
CIITA-212ENST00000618207 LRRC56Q8IYG6 542 aaPredicted RBP11.9□□□□□ -0.5
CIITA-212ENST00000618207 REPS1Q96D71 796 aa11.9□□□□□ -0.5
CIITA-212ENST00000618207 HSH2DQ96JZ2 352 aa11.9□□□□□ -0.5
CIITA-212ENST00000618207 RBM38Q9H0Z9 239 aaKnown RBP11.9□□□□□ -0.5
CIITA-212ENST00000618207 DPEP2Q9H4A9 486 aa11.9□□□□□ -0.5
CIITA-212ENST00000618207 ZNF639Q9UID6 485 aa11.9□□□□□ -0.5
CIITA-212ENST00000618207 BAG5Q9UL15 447 aa11.9□□□□□ -0.5
CIITA-212ENST00000618207 ZFR2Q9UPR6 939 aaKnown RBP11.9□□□□□ -0.5
CIITA-212ENST00000618207 ZNF451Q9Y4E5 1061 aa11.9□□□□□ -0.5
CIITA-212ENST00000618207 SPEGQ15772 3267 aa11.9□□□□□ -0.5
CIITA-212ENST00000618207 TRBV23OR9-2A0A075B6M9 112 aa11.9□□□□□ -0.5
CIITA-212ENST00000618207 TBC1D3DA0A087WVF3 549 aa11.9□□□□□ -0.5
CIITA-212ENST00000618207 TBC1D3IA0A087WXS9 549 aa11.9□□□□□ -0.5
CIITA-212ENST00000618207 TBC1D3EA0A087X179 549 aa11.9□□□□□ -0.5
CIITA-212ENST00000618207 TBC1D3KA0A087X1G2 549 aa11.9□□□□□ -0.5
CIITA-212ENST00000618207 A0A1B0GVG6 124 aa11.9□□□□□ -0.5
CIITA-212ENST00000618207 TBC1D3FA6NER0 549 aaPredicted RBP11.9□□□□□ -0.5
CIITA-212ENST00000618207 ANKDD1BA6NHY2 528 aa11.9□□□□□ -0.5
CIITA-212ENST00000618207 TBC1D3LB9A6J9 549 aa11.9□□□□□ -0.5
CIITA-212ENST00000618207 PRSS23O95084 383 aa11.9□□□□□ -0.5
CIITA-212ENST00000618207 TBC1D3HP0C7X1 549 aa11.9□□□□□ -0.5
CIITA-212ENST00000618207 CDH2P19022 906 aaPredicted RBP11.9□□□□□ -0.5
CIITA-212ENST00000618207 PTGER1P34995 402 aa11.9□□□□□ -0.5
CIITA-212ENST00000618207 ASMTP46597 345 aa11.9□□□□□ -0.5
CIITA-212ENST00000618207 OR1E2P47887 323 aa11.9□□□□□ -0.5
CIITA-212ENST00000618207 CLCN2P51788 898 aa11.9□□□□□ -0.5
CIITA-212ENST00000618207 KRT33BQ14525 404 aa11.9□□□□□ -0.5
CIITA-212ENST00000618207 TBC1D3GQ6DHY5 549 aa11.9□□□□□ -0.5
CIITA-212ENST00000618207 TBC1D3CQ6IPX1 549 aa11.9□□□□□ -0.5
CIITA-212ENST00000618207 ZBTB46Q86UZ6 589 aa11.9□□□□□ -0.5
CIITA-212ENST00000618207 TBC1D3Q8IZP1 549 aaPredicted RBP11.9□□□□□ -0.5
CIITA-212ENST00000618207 C16orf78Q8WTQ4 265 aa11.9□□□□□ -0.5
CIITA-212ENST00000618207 PPCDCQ96CD2 204 aa11.9□□□□□ -0.5
CIITA-212ENST00000618207 FCRL1Q96LA6 429 aa11.9□□□□□ -0.5
CIITA-212ENST00000618207 TRMT61BQ9BVS5 477 aaKnown RBP11.9□□□□□ -0.5
CIITA-212ENST00000618207 HDAC8Q9BY41 377 aa11.9□□□□□ -0.5
CIITA-212ENST00000618207 POLR1BQ9H9Y6 1135 aa11.9□□□□□ -0.5
CIITA-212ENST00000618207 CD93Q9NPY3 652 aa11.9□□□□□ -0.5
CIITA-212ENST00000618207 MIEF1Q9NQG6 463 aa11.9□□□□□ -0.5
CIITA-212ENST00000618207 IFT80Q9P2H3 777 aaPredicted RBP11.9□□□□□ -0.5
CIITA-212ENST00000618207 CDC14AQ9UNH5 594 aa11.9□□□□□ -0.5
CIITA-212ENST00000618207 CA5BQ9Y2D0 317 aa11.9□□□□□ -0.5
CIITA-212ENST00000618207 GPSM3Q9Y4H4 160 aa11.9□□□□□ -0.5
CIITA-212ENST00000618207 PCDHGA8Q9Y5G5 932 aa11.9□□□□□ -0.5
CIITA-212ENST00000618207 CEPT1Q9Y6K0 416 aa11.9□□□□□ -0.5
CIITA-212ENST00000618207 A0A087WXM4 84 aa11.89□□□□□ -0.51
CIITA-212ENST00000618207 C17orf113A0A1B0GUU1 675 aa11.89□□□□□ -0.51
CIITA-212ENST00000618207 PDZK1P1A8MUH7 402 aa11.89□□□□□ -0.51
CIITA-212ENST00000618207 PTGES3LE9PB15 166 aa11.89□□□□□ -0.51
CIITA-212ENST00000618207 GPX2P18283 190 aa11.89□□□□□ -0.51
CIITA-212ENST00000618207 AGXTP21549 392 aa11.89□□□□□ -0.51
CIITA-212ENST00000618207 KELP23276 732 aa11.89□□□□□ -0.51
CIITA-212ENST00000618207 RPS26P62854 115 aaKnown RBP11.89□□□□□ -0.51
CIITA-212ENST00000618207 HYAL1Q12794 435 aa11.89□□□□□ -0.51
CIITA-212ENST00000618207 SGCGQ13326 291 aa11.89□□□□□ -0.51
CIITA-212ENST00000618207 SZRD1Q7Z422 152 aa11.89□□□□□ -0.51
CIITA-212ENST00000618207 VN1R5Q7Z5H4 357 aa11.89□□□□□ -0.51
CIITA-212ENST00000618207 SERPINA11Q86U17 422 aa11.89□□□□□ -0.51
CIITA-212ENST00000618207 DCUN1D3Q8IWE4 304 aa11.89□□□□□ -0.51
CIITA-212ENST00000618207 ZCCHC7Q8N3Z6 543 aaKnown RBP11.89□□□□□ -0.51
CIITA-212ENST00000618207 SPPL2AQ8TCT8 520 aa11.89□□□□□ -0.51
CIITA-212ENST00000618207 COX14Q96I36 57 aa11.89□□□□□ -0.51
CIITA-212ENST00000618207 HHIPQ96QV1 700 aa11.89□□□□□ -0.51
CIITA-212ENST00000618207 SLC35A5Q9BS91 424 aa11.89□□□□□ -0.51
CIITA-212ENST00000618207 DCUN1D5Q9BTE7 237 aa11.89□□□□□ -0.51
CIITA-212ENST00000618207 OSBPL10Q9BXB5 764 aa11.89□□□□□ -0.51
CIITA-212ENST00000618207 RIBC2Q9H4K1 309 aa11.89□□□□□ -0.51
CIITA-212ENST00000618207 REEP4Q9H6H4 257 aa11.89□□□□□ -0.51
CIITA-212ENST00000618207 FAM118AQ9NWS6 357 aa11.89□□□□□ -0.51
CIITA-212ENST00000618207 NDUFA13Q9P0J0 144 aa11.89□□□□□ -0.51
CIITA-212ENST00000618207 SAMD4AQ9UPU9 718 aaKnown RBP11.89□□□□□ -0.51
CIITA-212ENST00000618207 DMTF1Q9Y222 760 aa11.89□□□□□ -0.51
CIITA-212ENST00000618207 WASHC1A8K0Z3 465 aa11.89□□□□□ -0.51
CIITA-212ENST00000618207 TMX2-CTNND1H3BSU7 103 aa11.89□□□□□ -0.51
CIITA-212ENST00000618207 HSD3B1P14060 373 aa11.89□□□□□ -0.51
CIITA-212ENST00000618207 HSD3B2P26439 372 aa11.89□□□□□ -0.51
CIITA-212ENST00000618207 SLC5A2P31639 672 aa11.89□□□□□ -0.51
CIITA-212ENST00000618207 PLA2G16P53816 162 aa11.89□□□□□ -0.51
CIITA-212ENST00000618207 PMS2P3Q13401 168 aa11.89□□□□□ -0.51
CIITA-212ENST00000618207 RGNQ15493 299 aa11.89□□□□□ -0.51
CIITA-212ENST00000618207 MPEG1Q2M385 716 aa11.89□□□□□ -0.51
CIITA-212ENST00000618207 ITPRIPL2Q3MIP1 535 aa11.89□□□□□ -0.51
CIITA-212ENST00000618207 ATAT1Q5SQI0 421 aa11.89□□□□□ -0.51
CIITA-212ENST00000618207 WASH2PQ6VEQ5 465 aa11.89□□□□□ -0.51
CIITA-212ENST00000618207 HORMAD1Q86X24 394 aa11.89□□□□□ -0.51
CIITA-212ENST00000618207 ZC3H7AQ8IWR0 971 aaKnown RBP11.89□□□□□ -0.51
CIITA-212ENST00000618207 ANKRD53Q8N9V6 530 aa11.89□□□□□ -0.51
CIITA-212ENST00000618207 SMYD1Q8NB12 490 aa11.89□□□□□ -0.51
CIITA-212ENST00000618207 DNAJB8Q8NHS0 232 aa11.89□□□□□ -0.51
CIITA-212ENST00000618207 LINC00615Q96LM1 132 aaPredicted RBP11.89□□□□□ -0.51
CIITA-212ENST00000618207 RUBCNLQ9H714 662 aa11.89□□□□□ -0.51
CIITA-212ENST00000618207 CD320Q9NPF0 282 aa11.89□□□□□ -0.51
CIITA-212ENST00000618207 RABL2BQ9UNT1 228 aa11.89□□□□□ -0.51
CIITA-212ENST00000618207 KLHL20Q9Y2M5 609 aa11.89□□□□□ -0.51
CIITA-212ENST00000618207 COMMD3-BMI1R4GMX3 469 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms