RNA–Protein interactions for RNA: ENST00000617799.1

SBDS-205, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SBDS, Length 953 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-205ENST00000617799 SEMA4BQ9NPR2 832 aaPredicted RBP16.33■□□□□ 0.2
SBDS-205ENST00000617799 MRPS18BQ9Y676 258 aaKnown RBP16.33■□□□□ 0.2
SBDS-205ENST00000617799 A0A0A6YYC8 382 aaPredicted RBP16.32■□□□□ 0.2
SBDS-205ENST00000617799 I3L1I5 382 aaPredicted RBP16.32■□□□□ 0.2
SBDS-205ENST00000617799 EFSO43281 561 aa16.32■□□□□ 0.2
SBDS-205ENST00000617799 WFS1O76024 890 aa16.32■□□□□ 0.2
SBDS-205ENST00000617799 SERPINE1P05121 402 aa16.32■□□□□ 0.2
SBDS-205ENST00000617799 ENO1P06733 434 aaKnown RBP16.32■□□□□ 0.2
SBDS-205ENST00000617799 TSPAN8P19075 237 aa16.32■□□□□ 0.2
SBDS-205ENST00000617799 CD22P20273 847 aa16.32■□□□□ 0.2
SBDS-205ENST00000617799 F8A1P23610 371 aa16.32■□□□□ 0.2
SBDS-205ENST00000617799 AVPR1BP47901 424 aa16.32■□□□□ 0.2
SBDS-205ENST00000617799 NAGLUP54802 743 aa16.32■□□□□ 0.2
SBDS-205ENST00000617799 RPS18P62269 152 aaKnown RBP16.32■□□□□ 0.2
SBDS-205ENST00000617799 PHEXP78562 749 aa16.32■□□□□ 0.2
SBDS-205ENST00000617799 VAC14Q08AM6 782 aa16.32■□□□□ 0.2
SBDS-205ENST00000617799 DDX39BQ13838 428 aaKnown RBP16.32■□□□□ 0.2
SBDS-205ENST00000617799 TOR1AIP1Q5JTV8 583 aa16.32■□□□□ 0.2
SBDS-205ENST00000617799 GRHL2Q6ISB3 625 aa16.32■□□□□ 0.2
SBDS-205ENST00000617799 TMEM214Q6NUQ4 689 aaKnown RBP16.32■□□□□ 0.2
SBDS-205ENST00000617799 ZNF517Q6ZMY9 492 aaPredicted RBP16.32■□□□□ 0.2
SBDS-205ENST00000617799 FRMD7Q6ZUT3 714 aa16.32■□□□□ 0.2
SBDS-205ENST00000617799 CCNYL1Q8N7R7 359 aa16.32■□□□□ 0.2
SBDS-205ENST00000617799 OR9A4Q8NGU2 314 aa16.32■□□□□ 0.2
SBDS-205ENST00000617799 NT5CQ8TCD5 201 aa16.32■□□□□ 0.2
SBDS-205ENST00000617799 DYDC1Q8WWB3 177 aa16.32■□□□□ 0.2
SBDS-205ENST00000617799 MVB12AQ96EY5 273 aa16.32■□□□□ 0.2
SBDS-205ENST00000617799 ACSS2Q9NR19 701 aa16.32■□□□□ 0.2
SBDS-205ENST00000617799 INTS9Q9NV88 658 aaKnown RBP16.32■□□□□ 0.2
SBDS-205ENST00000617799 MRPS2Q9Y399 296 aaKnown RBP16.32■□□□□ 0.2
SBDS-205ENST00000617799 TSC22D4Q9Y3Q8 395 aa16.32■□□□□ 0.2
SBDS-205ENST00000617799 PCDHGA11Q9Y5H2 935 aa16.32■□□□□ 0.2
SBDS-205ENST00000617799 KMT2BQ9UMN6 2715 aaPredicted RBP16.32■□□□□ 0.2
SBDS-205ENST00000617799 ANKRD11Q6UB99 2663 aaPredicted RBP16.32■□□□□ 0.2
SBDS-205ENST00000617799 URADA6NGE7 173 aa16.31■□□□□ 0.2
SBDS-205ENST00000617799 ZNF891A8MT65 544 aaPredicted RBP16.31■□□□□ 0.2
SBDS-205ENST00000617799 OR7A17O14581 309 aa16.31■□□□□ 0.2
SBDS-205ENST00000617799 KLF11O14901 512 aa16.31■□□□□ 0.2
SBDS-205ENST00000617799 CLDN9O95484 217 aa16.31■□□□□ 0.2
SBDS-205ENST00000617799 RAB40ALP0C0E4 278 aa16.31■□□□□ 0.2
SBDS-205ENST00000617799 PRKAR1AP10644 381 aa16.31■□□□□ 0.2
SBDS-205ENST00000617799 IL1RNP18510 177 aa16.31■□□□□ 0.2
SBDS-205ENST00000617799 WT1P19544 449 aaPredicted RBP16.31■□□□□ 0.2
SBDS-205ENST00000617799 ITGAXP20702 1163 aa16.31■□□□□ 0.2
SBDS-205ENST00000617799 PTPN4P29074 926 aa16.31■□□□□ 0.2
SBDS-205ENST00000617799 CDH13P55290 713 aa16.31■□□□□ 0.2
SBDS-205ENST00000617799 STXBP1P61764 594 aaKnown RBP16.31■□□□□ 0.2
SBDS-205ENST00000617799 SKP1P63208 163 aa16.31■□□□□ 0.2
SBDS-205ENST00000617799 MC1RQ01726 317 aa16.31■□□□□ 0.2
SBDS-205ENST00000617799 FAM53BQ14153 422 aa16.31■□□□□ 0.2
SBDS-205ENST00000617799 CPSF6Q16630 551 aaKnown RBP eCLIP16.31■□□□□ 0.2
SBDS-205ENST00000617799 COL28A1Q2UY09 1125 aa16.31■□□□□ 0.2
SBDS-205ENST00000617799 ABHD13Q7L211 337 aa16.31■□□□□ 0.2
SBDS-205ENST00000617799 AFAP1L2Q8N4X5 818 aa16.31■□□□□ 0.2
SBDS-205ENST00000617799 L3MBTL4Q8NA19 623 aa16.31■□□□□ 0.2
SBDS-205ENST00000617799 OR52B6Q8NGF0 335 aa16.31■□□□□ 0.2
SBDS-205ENST00000617799 SLC45A3Q96JT2 553 aa16.31■□□□□ 0.2
SBDS-205ENST00000617799 CDK15Q96Q40 435 aa16.31■□□□□ 0.2
SBDS-205ENST00000617799 PAIP2Q9BPZ3 127 aaKnown RBP16.31■□□□□ 0.2
SBDS-205ENST00000617799 PFDN4Q9NQP4 134 aa16.31■□□□□ 0.2
SBDS-205ENST00000617799 TRPS1Q9UHF7 1281 aa16.31■□□□□ 0.2
SBDS-205ENST00000617799 ZNF490Q9ULM2 529 aaPredicted RBP16.31■□□□□ 0.2
SBDS-205ENST00000617799 FARSAQ9Y285 508 aaKnown RBP16.31■□□□□ 0.2
SBDS-205ENST00000617799 TERTO14746 1132 aaKnown RBP16.3■□□□□ 0.2
SBDS-205ENST00000617799 CLEC3AO75596 197 aa16.3■□□□□ 0.2
SBDS-205ENST00000617799 SERPINA6P08185 405 aa16.3■□□□□ 0.2
SBDS-205ENST00000617799 CD63P08962 238 aa16.3■□□□□ 0.2
SBDS-205ENST00000617799 ZNF888P0CJ79 500 aaPredicted RBP16.3■□□□□ 0.2
SBDS-205ENST00000617799 DSG2Q14126 1118 aa16.3■□□□□ 0.2
SBDS-205ENST00000617799 MPP2Q14168 576 aa16.3■□□□□ 0.2
SBDS-205ENST00000617799 RCN2Q14257 317 aa16.3■□□□□ 0.2
SBDS-205ENST00000617799 HERC3Q15034 1050 aa16.3■□□□□ 0.2
SBDS-205ENST00000617799 UNC50Q53HI1 259 aa16.3■□□□□ 0.2
SBDS-205ENST00000617799 TTC19Q6DKK2 380 aaPredicted RBP16.3■□□□□ 0.2
SBDS-205ENST00000617799 ADNP2Q6IQ32 1131 aa16.3■□□□□ 0.2
SBDS-205ENST00000617799 NIPAL1Q6NVV3 410 aa16.3■□□□□ 0.2
SBDS-205ENST00000617799 GPRIN3Q6ZVF9 776 aa16.3■□□□□ 0.2
SBDS-205ENST00000617799 PRSS41Q7RTY9 318 aa16.3■□□□□ 0.2
SBDS-205ENST00000617799 MILR1Q7Z6M3 343 aa16.3■□□□□ 0.2
SBDS-205ENST00000617799 ARHGEF39Q8N4T4 335 aa16.3■□□□□ 0.2
SBDS-205ENST00000617799 FAM76AQ8TAV0 307 aa16.3■□□□□ 0.2
SBDS-205ENST00000617799 TRPC4APQ8TEL6 797 aa16.3■□□□□ 0.2
SBDS-205ENST00000617799 CREB3L4Q8TEY5 395 aa16.3■□□□□ 0.2
SBDS-205ENST00000617799 FKBP10Q96AY3 582 aa16.3■□□□□ 0.2
SBDS-205ENST00000617799 CRELD1Q96HD1 420 aa16.3■□□□□ 0.2
SBDS-205ENST00000617799 CCT7Q99832 543 aa16.3■□□□□ 0.2
SBDS-205ENST00000617799 SLC29A3Q9BZD2 475 aa16.3■□□□□ 0.2
SBDS-205ENST00000617799 ZBTB26Q9HCK0 441 aa16.3■□□□□ 0.2
SBDS-205ENST00000617799 TRPC4Q9UBN4 977 aa16.3■□□□□ 0.2
SBDS-205ENST00000617799 CTSFQ9UBX1 484 aa16.3■□□□□ 0.2
SBDS-205ENST00000617799 SNX6Q9UNH7 406 aa16.3■□□□□ 0.2
SBDS-205ENST00000617799 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.3■□□□□ 0.2
SBDS-205ENST00000617799 SSUH2Q9Y2M2 353 aa16.3■□□□□ 0.2
SBDS-205ENST00000617799 RNF11Q9Y3C5 154 aa16.3■□□□□ 0.2
SBDS-205ENST00000617799 PTRH2Q9Y3E5 179 aaKnown RBP16.3■□□□□ 0.2
SBDS-205ENST00000617799 NAALAD2Q9Y3Q0 740 aa16.3■□□□□ 0.2
SBDS-205ENST00000617799 PCDHGA6Q9Y5G7 932 aa16.3■□□□□ 0.2
SBDS-205ENST00000617799 SLC22A7Q9Y694 548 aa16.3■□□□□ 0.2
SBDS-205ENST00000617799 CACNA1BQ00975 2339 aa16.3■□□□□ 0.2
SBDS-205ENST00000617799 ZNF860A6NHJ4 632 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms