RNA–Protein interactions for RNA: ENST00000617185.4

TP53-222, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,724 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-222	ENST00000617185	CXCR6	O00574	342 aa		11.16	□□□□□ -0.62
TP53-222	ENST00000617185	GABRD	O14764	452 aa		11.16	□□□□□ -0.62
TP53-222	ENST00000617185	GNB5	O14775	395 aa		11.16	□□□□□ -0.62
TP53-222	ENST00000617185	GATC	O43716	136 aa	Known RBP	11.16	□□□□□ -0.62
TP53-222	ENST00000617185	GPX5	O75715	221 aa		11.16	□□□□□ -0.62
TP53-222	ENST00000617185	MPC2	O95563	127 aa		11.16	□□□□□ -0.62
TP53-222	ENST00000617185	SLC10A3	P09131	477 aa		11.16	□□□□□ -0.62
TP53-222	ENST00000617185	CPB1	P15086	417 aa		11.16	□□□□□ -0.62
TP53-222	ENST00000617185	EPHA2	P29317	976 aa		11.16	□□□□□ -0.62
TP53-222	ENST00000617185	FOXA1	P55317	472 aa		11.16	□□□□□ -0.62
TP53-222	ENST00000617185	PRKG2	Q13237	762 aa		11.16	□□□□□ -0.62
TP53-222	ENST00000617185	ADAM15	Q13444	863 aa		11.16	□□□□□ -0.62
TP53-222	ENST00000617185	IQCC	Q4KMZ1	466 aa		11.16	□□□□□ -0.62
TP53-222	ENST00000617185	TRIQK	Q629K1	86 aa		11.16	□□□□□ -0.62
TP53-222	ENST00000617185	CHMP1B	Q7LBR1	199 aa		11.16	□□□□□ -0.62
TP53-222	ENST00000617185	ZSWIM9	Q86XI8	627 aa		11.16	□□□□□ -0.62
TP53-222	ENST00000617185	ZDHHC17	Q8IUH5	632 aa		11.16	□□□□□ -0.62
TP53-222	ENST00000617185	NPW	Q8N729	165 aa		11.16	□□□□□ -0.62
TP53-222	ENST00000617185	ZNF548	Q8NEK5	533 aa	Predicted RBP	11.16	□□□□□ -0.62
TP53-222	ENST00000617185	EXOC2	Q96KP1	924 aa		11.16	□□□□□ -0.62
TP53-222	ENST00000617185	TTYH1	Q9H313	450 aa	Predicted RBP	11.16	□□□□□ -0.62
TP53-222	ENST00000617185	KRT84	Q9NSB2	600 aa		11.16	□□□□□ -0.62
TP53-222	ENST00000617185	DCAF13	Q9NV06	445 aa	Known RBP	11.16	□□□□□ -0.62
TP53-222	ENST00000617185	RNF186	Q9NXI6	227 aa		11.16	□□□□□ -0.62
TP53-222	ENST00000617185	VNN3	Q9NY84	501 aa		11.16	□□□□□ -0.62
TP53-222	ENST00000617185	PCDHGA9	Q9Y5G4	932 aa	Known RBP	11.16	□□□□□ -0.62
TP53-222	ENST00000617185	RALGAPA2	Q2PPJ7	1873 aa		11.16	□□□□□ -0.62
TP53-222	ENST00000617185	ELOVL7	A1L3X0	281 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	INMT-MINDY4	F8WBC2	141 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	PITPNM1	O00562	1244 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	PEX14	O75381	377 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	PLAT	P00750	562 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	FAM157B	P0CG42	384 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	ERCC2	P18074	760 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	LHCGR	P22888	699 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	NOS2	P35228	1153 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	ZNF81	P51508	661 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	CLCN7	P51798	805 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	CRISP3	P54108	245 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	SNX16	P57768	344 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	DAOA	P59103	153 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	ABAT	P80404	500 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	EIF4H	Q15056	248 aa	Known RBP	11.15	□□□□□ -0.62
TP53-222	ENST00000617185	TST	Q16762	297 aa	Known RBP	11.15	□□□□□ -0.62
TP53-222	ENST00000617185	UPP1	Q16831	310 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	C10orf62	Q5T681	223 aa	Predicted RBP	11.15	□□□□□ -0.62
TP53-222	ENST00000617185	KCTD11	Q693B1	232 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	BICRAL	Q6AI39	1079 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	FCRLB	Q6BAA4	426 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	RASSF6	Q6ZTQ3	369 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	KDELC2	Q7Z4H8	507 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	ATCAY	Q86WG3	371 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	ZFAND4	Q86XD8	727 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	MS4A15	Q8N5U1	240 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	NPY6R	Q99463	290 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	BARD1	Q99728	777 aa	Known RBP	11.15	□□□□□ -0.62
TP53-222	ENST00000617185	CD244	Q9BZW8	370 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	ABCB9	Q9NP78	766 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	EMC7	Q9NPA0	242 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	ACTR10	Q9NZ32	417 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	KCMF1	Q9P0J7	381 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	MBD2	Q9UBB5	411 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	HCST	Q9UBK5	93 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	PHF11	Q9UIL8	331 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	PRG3	Q9Y2Y8	225 aa	Predicted RBP	11.15	□□□□□ -0.62
TP53-222	ENST00000617185	COMMD10	Q9Y6G5	202 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	WASH4P	A8MWX3	477 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	ST8SIA5	O15466	376 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	LYRM1	O43325	122 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	CHP2	O43745	196 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	MOCS2	O96007	188 aa	Predicted RBP	11.15	□□□□□ -0.62
TP53-222	ENST00000617185	HLA-DQB1	P01920	261 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	STS	P08842	583 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	CNP	P09543	421 aa	Known RBP	11.15	□□□□□ -0.62
TP53-222	ENST00000617185	PRR35	P0CG20	571 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	IL1RN	P18510	177 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	HOXC8	P31273	242 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	NFKB2	Q00653	900 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	NPRL3	Q12980	569 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	LAPTM4A	Q15012	233 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	ZNF284	Q2VY69	593 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	MFSD14C	Q5VZR4	134 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	SERINC5	Q86VE9	423 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	C9orf43	Q8TAL5	461 aa	Predicted RBP	11.15	□□□□□ -0.62
TP53-222	ENST00000617185	MTERF3	Q96E29	417 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	MGLL	Q99685	303 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	C1QTNF6	Q9BXI9	259 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	TKTL2	Q9H0I9	626 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	MED28	Q9H204	178 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	FAM124B	Q9H5Z6	455 aa	Predicted RBP	11.15	□□□□□ -0.62
TP53-222	ENST00000617185	AMBN	Q9NP70	447 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	EXOSC4	Q9NPD3	245 aa	Known RBP	11.15	□□□□□ -0.62
TP53-222	ENST00000617185	SNTG1	Q9NSN8	517 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	MED9	Q9NWA0	146 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	TRPM5	Q9NZQ8	1165 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	DTX4	Q9Y2E6	619 aa		11.15	□□□□□ -0.62
TP53-222	ENST00000617185	PDCD11	Q14690	1871 aa	Known RBP	11.15	□□□□□ -0.63
TP53-222	ENST00000617185	ARNTL	O00327	626 aa		11.15	□□□□□ -0.63
TP53-222	ENST00000617185	SIGLEC6	O43699	453 aa		11.15	□□□□□ -0.63
TP53-222	ENST00000617185	PLOD3	O60568	738 aa		11.15	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms