RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 PVRP15151 417 aa14.16□□□□□ -0.14
UBXN1-218ENST00000616865 MAGP20916 626 aa14.16□□□□□ -0.14
UBXN1-218ENST00000616865 ITGA1P56199 1179 aa14.16□□□□□ -0.14
UBXN1-218ENST00000616865 CLCQ05315 142 aa14.16□□□□□ -0.14
UBXN1-218ENST00000616865 CHI3L2Q15782 390 aa14.16□□□□□ -0.14
UBXN1-218ENST00000616865 HIST2H2ACQ16777 129 aaPredicted RBP14.16□□□□□ -0.14
UBXN1-218ENST00000616865 ZXDCQ2QGD7 858 aaPredicted RBP14.16□□□□□ -0.14
UBXN1-218ENST00000616865 EIF2S3LQ2VIR3 472 aaKnown RBP14.16□□□□□ -0.14
UBXN1-218ENST00000616865 XKR6Q5GH73 641 aa14.16□□□□□ -0.14
UBXN1-218ENST00000616865 HIST2H2AA3Q6FI13 130 aa14.16□□□□□ -0.14
UBXN1-218ENST00000616865 MED25Q71SY5 747 aa14.16□□□□□ -0.14
UBXN1-218ENST00000616865 RBMXL3Q8N7X1 1067 aaKnown RBP14.16□□□□□ -0.14
UBXN1-218ENST00000616865 TMEM102Q8N9M5 508 aaPredicted RBP14.16□□□□□ -0.14
UBXN1-218ENST00000616865 FAM76AQ8TAV0 307 aa14.16□□□□□ -0.14
UBXN1-218ENST00000616865 TRPC4APQ8TEL6 797 aa14.16□□□□□ -0.14
UBXN1-218ENST00000616865 ZNF483Q8TF39 744 aaPredicted RBP14.16□□□□□ -0.14
UBXN1-218ENST00000616865 N4BP2L2Q92802 583 aaPredicted RBP14.16□□□□□ -0.14
UBXN1-218ENST00000616865 NEIL2Q969S2 332 aa14.16□□□□□ -0.14
UBXN1-218ENST00000616865 OR4K3Q96R72 315 aa14.16□□□□□ -0.14
UBXN1-218ENST00000616865 MFRPQ9BY79 579 aa14.16□□□□□ -0.14
UBXN1-218ENST00000616865 NOL11Q9H8H0 719 aaKnown RBP14.16□□□□□ -0.14
UBXN1-218ENST00000616865 ACTR8Q9H981 624 aa14.16□□□□□ -0.14
UBXN1-218ENST00000616865 ACTR5Q9H9F9 607 aaPredicted RBP14.16□□□□□ -0.14
UBXN1-218ENST00000616865 PELI2Q9HAT8 420 aa14.16□□□□□ -0.14
UBXN1-218ENST00000616865 TMEM184CQ9NVA4 438 aa14.16□□□□□ -0.14
UBXN1-218ENST00000616865 GPR83Q9NYM4 423 aa14.16□□□□□ -0.14
UBXN1-218ENST00000616865 KLHL20Q9Y2M5 609 aa14.16□□□□□ -0.14
UBXN1-218ENST00000616865 ASB1Q9Y576 335 aa14.16□□□□□ -0.14
UBXN1-218ENST00000616865 PCM1Q15154 2024 aa14.15□□□□□ -0.14
UBXN1-218ENST00000616865 TMEM150CB9EJG8 249 aa14.15□□□□□ -0.14
UBXN1-218ENST00000616865 E7EQ34 232 aa14.15□□□□□ -0.14
UBXN1-218ENST00000616865 H7BY64 318 aa14.15□□□□□ -0.14
UBXN1-218ENST00000616865 CRCPO75575 148 aa14.15□□□□□ -0.14
UBXN1-218ENST00000616865 OTCP00480 354 aa14.15□□□□□ -0.14
UBXN1-218ENST00000616865 SERPINE1P05121 402 aa14.15□□□□□ -0.14
UBXN1-218ENST00000616865 MSL3P1P0C860 447 aa14.15□□□□□ -0.14
UBXN1-218ENST00000616865 C1GALT1C1LP0DN25 315 aa14.15□□□□□ -0.14
UBXN1-218ENST00000616865 ST6GAL1P15907 406 aa14.15□□□□□ -0.14
UBXN1-218ENST00000616865 TSPAN8P19075 237 aa14.15□□□□□ -0.14
UBXN1-218ENST00000616865 CXCR2P25025 360 aa14.15□□□□□ -0.14
UBXN1-218ENST00000616865 VARSP26640 1264 aaKnown RBP14.15□□□□□ -0.14
UBXN1-218ENST00000616865 GRIA3P42263 894 aa14.15□□□□□ -0.14
UBXN1-218ENST00000616865 RRADP55042 308 aa14.15□□□□□ -0.14
UBXN1-218ENST00000616865 CDH13P55290 713 aa14.15□□□□□ -0.14
UBXN1-218ENST00000616865 WDR4P57081 412 aaKnown RBP14.15□□□□□ -0.14
UBXN1-218ENST00000616865 CHIT1Q13231 466 aa14.15□□□□□ -0.14
UBXN1-218ENST00000616865 STX3Q13277 289 aa14.15□□□□□ -0.14
UBXN1-218ENST00000616865 NCF4Q15080 339 aa14.15□□□□□ -0.14
UBXN1-218ENST00000616865 PAGE2BQ5JRK9 111 aa14.15□□□□□ -0.14
UBXN1-218ENST00000616865 ATG16L1Q676U5 607 aa14.15□□□□□ -0.14
UBXN1-218ENST00000616865 NXPE4Q6UWF7 544 aa14.15□□□□□ -0.14
UBXN1-218ENST00000616865 ZCCHC23Q6ZST2 131 aa14.15□□□□□ -0.14
UBXN1-218ENST00000616865 RPS27LQ71UM5 84 aaKnown RBP14.15□□□□□ -0.14
UBXN1-218ENST00000616865 KRT78Q8N1N4 520 aa14.15□□□□□ -0.14
UBXN1-218ENST00000616865 C19orf47Q8N9M1 422 aaKnown RBP14.15□□□□□ -0.14
UBXN1-218ENST00000616865 OR1L3Q8NH93 324 aa14.15□□□□□ -0.14
UBXN1-218ENST00000616865 FLVCR1-AS1Q8TAF5 88 aa14.15□□□□□ -0.14
UBXN1-218ENST00000616865 ZUFSPQ96AP4 578 aa14.15□□□□□ -0.14
UBXN1-218ENST00000616865 TCTN2Q96GX1 697 aa14.15□□□□□ -0.14
UBXN1-218ENST00000616865 CNDP1Q96KN2 507 aa14.15□□□□□ -0.14
UBXN1-218ENST00000616865 PRAP1Q96NZ9 151 aa14.15□□□□□ -0.14
UBXN1-218ENST00000616865 NSUN5Q96P11 429 aaKnown RBP14.15□□□□□ -0.14
UBXN1-218ENST00000616865 TRAPPC9Q96Q05 1148 aa14.15□□□□□ -0.14
UBXN1-218ENST00000616865 SMAD5Q99717 465 aaKnown RBP14.15□□□□□ -0.14
UBXN1-218ENST00000616865 AIF1LQ9BQI0 150 aa14.15□□□□□ -0.14
UBXN1-218ENST00000616865 GATA5Q9BWX5 397 aaPredicted RBP14.15□□□□□ -0.14
UBXN1-218ENST00000616865 C1QTNF3Q9BXJ4 246 aa14.15□□□□□ -0.14
UBXN1-218ENST00000616865 PITPNM3Q9BZ71 974 aa14.15□□□□□ -0.14
UBXN1-218ENST00000616865 EML4Q9HC35 981 aaKnown RBP14.15□□□□□ -0.14
UBXN1-218ENST00000616865 SLC6A20Q9NP91 592 aa14.15□□□□□ -0.14
UBXN1-218ENST00000616865 MAP10Q9P2G4 905 aa14.15□□□□□ -0.14
UBXN1-218ENST00000616865 SH2B3Q9UQQ2 575 aa14.15□□□□□ -0.14
UBXN1-218ENST00000616865 A6NL46 340 aa14.14□□□□□ -0.15
UBXN1-218ENST00000616865 NPHS1O60500 1241 aa14.14□□□□□ -0.15
UBXN1-218ENST00000616865 CLDN9O95484 217 aa14.14□□□□□ -0.15
UBXN1-218ENST00000616865 BGNP21810 368 aa14.14□□□□□ -0.15
UBXN1-218ENST00000616865 GRK2P25098 689 aa14.14□□□□□ -0.15
UBXN1-218ENST00000616865 LCP2Q13094 533 aa14.14□□□□□ -0.15
UBXN1-218ENST00000616865 LAPTM5Q13571 262 aa14.14□□□□□ -0.15
UBXN1-218ENST00000616865 ATP1A4Q13733 1029 aa14.14□□□□□ -0.15
UBXN1-218ENST00000616865 RCN2Q14257 317 aa14.14□□□□□ -0.15
UBXN1-218ENST00000616865 ZC3H12BQ5HYM0 836 aaKnown RBP14.14□□□□□ -0.15
UBXN1-218ENST00000616865 CATSPEREQ5SY80 951 aa14.14□□□□□ -0.15
UBXN1-218ENST00000616865 ATG9BQ674R7 924 aa14.14□□□□□ -0.15
UBXN1-218ENST00000616865 FRMD7Q6ZUT3 714 aa14.14□□□□□ -0.15
UBXN1-218ENST00000616865 GPRIN3Q6ZVF9 776 aa14.14□□□□□ -0.15
UBXN1-218ENST00000616865 MILR1Q7Z6M3 343 aa14.14□□□□□ -0.15
UBXN1-218ENST00000616865 PRR7Q8TB68 274 aa14.14□□□□□ -0.15
UBXN1-218ENST00000616865 PTCD3Q96EY7 689 aaKnown RBP14.14□□□□□ -0.15
UBXN1-218ENST00000616865 MAGEB10Q96LZ2 347 aaPredicted RBP14.14□□□□□ -0.15
UBXN1-218ENST00000616865 PLCD4Q9BRC7 762 aa14.14□□□□□ -0.15
UBXN1-218ENST00000616865 TRMOQ9BU70 441 aa14.14□□□□□ -0.15
UBXN1-218ENST00000616865 EFCAB11Q9BUY7 163 aa14.14□□□□□ -0.15
UBXN1-218ENST00000616865 GSTO2Q9H4Y5 243 aa14.14□□□□□ -0.15
UBXN1-218ENST00000616865 FER1L5A0AVI2 2057 aa14.13□□□□□ -0.15
UBXN1-218ENST00000616865 TMEM114B3SHH9 223 aa14.13□□□□□ -0.15
UBXN1-218ENST00000616865 HSPA4LO95757 839 aa14.13□□□□□ -0.15
UBXN1-218ENST00000616865 SERPINB5P36952 375 aa14.13□□□□□ -0.15
UBXN1-218ENST00000616865 HNF4AP41235 474 aa14.13□□□□□ -0.15
UBXN1-218ENST00000616865 PKNOX1P55347 436 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms