RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 FAM43BQ6ZT52 329 aaPredicted RBP17.14■□□□□ 0.33
ATXN2-227ENST00000616825 RPS27LQ71UM5 84 aaKnown RBP17.14■□□□□ 0.33
ATXN2-227ENST00000616825 CMTR2Q8IYT2 770 aaKnown RBP17.14■□□□□ 0.33
ATXN2-227ENST00000616825 JAGN1Q8N5M9 183 aa17.14■□□□□ 0.33
ATXN2-227ENST00000616825 CCDC107Q8WV48 283 aa17.14■□□□□ 0.33
ATXN2-227ENST00000616825 PCYT2Q99447 389 aa17.14■□□□□ 0.33
ATXN2-227ENST00000616825 LOC100130705A0A1B0GUX0 176 aa17.14■□□□□ 0.33
ATXN2-227ENST00000616825 GATMP50440 423 aa17.14■□□□□ 0.33
ATXN2-227ENST00000616825 TPRG1LQ5T0D9 272 aa17.14■□□□□ 0.33
ATXN2-227ENST00000616825 HSDL2Q6YN16 418 aa17.14■□□□□ 0.33
ATXN2-227ENST00000616825 YIPF7Q8N8F6 280 aa17.14■□□□□ 0.33
ATXN2-227ENST00000616825 TXNDC5Q8NBS9 432 aaKnown RBP17.14■□□□□ 0.33
ATXN2-227ENST00000616825 ZNF548Q8NEK5 533 aaPredicted RBP17.14■□□□□ 0.33
ATXN2-227ENST00000616825 PKP2Q99959 881 aa17.14■□□□□ 0.33
ATXN2-227ENST00000616825 GPR62Q9BZJ7 368 aa17.14■□□□□ 0.33
ATXN2-227ENST00000616825 ACTL8Q9H568 366 aa17.14■□□□□ 0.33
ATXN2-227ENST00000616825 LRRC42Q9Y546 428 aa17.14■□□□□ 0.33
ATXN2-227ENST00000616825 HYKKA2RU49 373 aa17.13■□□□□ 0.33
ATXN2-227ENST00000616825 ENTPD6O75354 484 aa17.13■□□□□ 0.33
ATXN2-227ENST00000616825 ANKFN1Q8N957 763 aa17.13■□□□□ 0.33
ATXN2-227ENST00000616825 SETD7Q8WTS6 366 aaKnown RBP17.13■□□□□ 0.33
ATXN2-227ENST00000616825 REEP4Q9H6H4 257 aa17.13■□□□□ 0.33
ATXN2-227ENST00000616825 GIN1Q9NXP7 522 aa17.13■□□□□ 0.33
ATXN2-227ENST00000616825 NOX1Q9Y5S8 564 aa17.13■□□□□ 0.33
ATXN2-227ENST00000616825 BLOC1S5-TXNDC5H3BN57 136 aa17.13■□□□□ 0.33
ATXN2-227ENST00000616825 KHNYNO15037 678 aaKnown RBP17.13■□□□□ 0.33
ATXN2-227ENST00000616825 TSPAN9O75954 239 aa17.13■□□□□ 0.33
ATXN2-227ENST00000616825 IFI30P13284 250 aa17.13■□□□□ 0.33
ATXN2-227ENST00000616825 TRAM2Q15035 370 aa17.13■□□□□ 0.33
ATXN2-227ENST00000616825 SPATS1Q496A3 300 aa17.13■□□□□ 0.33
ATXN2-227ENST00000616825 GXYLT1Q4G148 440 aa17.13■□□□□ 0.33
ATXN2-227ENST00000616825 CYBRD1Q53TN4 286 aa17.13■□□□□ 0.33
ATXN2-227ENST00000616825 SMYD5Q6GMV2 418 aa17.13■□□□□ 0.33
ATXN2-227ENST00000616825 ZNF615Q8N8J6 731 aa17.13■□□□□ 0.33
ATXN2-227ENST00000616825 OR10Q1Q8NGQ4 319 aa17.13■□□□□ 0.33
ATXN2-227ENST00000616825 RAB8BQ92930 207 aa17.13■□□□□ 0.33
ATXN2-227ENST00000616825 OR2M4Q96R27 311 aa17.13■□□□□ 0.33
ATXN2-227ENST00000616825 MCHR1Q99705 422 aa17.13■□□□□ 0.33
ATXN2-227ENST00000616825 C5orf51A6NDU8 294 aa17.13■□□□□ 0.33
ATXN2-227ENST00000616825 SLC2A2P11168 524 aaPredicted RBP17.13■□□□□ 0.33
ATXN2-227ENST00000616825 PSKH1P11801 424 aa17.13■□□□□ 0.33
ATXN2-227ENST00000616825 MATN1P21941 496 aa17.13■□□□□ 0.33
ATXN2-227ENST00000616825 KCNJ5P48544 419 aa17.13■□□□□ 0.33
ATXN2-227ENST00000616825 DIO3P55073 304 aa17.13■□□□□ 0.33
ATXN2-227ENST00000616825 ELAVL3Q14576 367 aaKnown RBP17.13■□□□□ 0.33
ATXN2-227ENST00000616825 EIF4HQ15056 248 aaKnown RBP17.13■□□□□ 0.33
ATXN2-227ENST00000616825 TSC22D1Q15714 1073 aa17.13■□□□□ 0.33
ATXN2-227ENST00000616825 KLHL26Q53HC5 615 aa17.13■□□□□ 0.33
ATXN2-227ENST00000616825 ZNF598Q86UK7 904 aaKnown RBP17.13■□□□□ 0.33
ATXN2-227ENST00000616825 P2RY13Q9BPV8 354 aa17.13■□□□□ 0.33
ATXN2-227ENST00000616825 GIMAP2Q9UG22 337 aa17.13■□□□□ 0.33
ATXN2-227ENST00000616825 ZNF670-ZNF695F2Z2N8 137 aa17.13■□□□□ 0.33
ATXN2-227ENST00000616825 INMTO95050 263 aa17.13■□□□□ 0.33
ATXN2-227ENST00000616825 ASGR2P07307 311 aa17.13■□□□□ 0.33
ATXN2-227ENST00000616825 CDH15P55291 814 aa17.13■□□□□ 0.33
ATXN2-227ENST00000616825 ZMYND11Q15326 602 aa17.13■□□□□ 0.33
ATXN2-227ENST00000616825 NOXRED1Q6NXP6 359 aa17.13■□□□□ 0.33
ATXN2-227ENST00000616825 RELL1Q8IUW5 271 aa17.13■□□□□ 0.33
ATXN2-227ENST00000616825 NLGN3Q9NZ94 848 aa17.13■□□□□ 0.33
ATXN2-227ENST00000616825 CYTH4Q9UIA0 394 aa17.13■□□□□ 0.33
ATXN2-227ENST00000616825 GABRQQ9UN88 632 aa17.13■□□□□ 0.33
ATXN2-227ENST00000616825 PCDHB3Q9Y5E6 796 aa17.13■□□□□ 0.33
ATXN2-227ENST00000616825 GLOD5A6NK44 160 aa17.12■□□□□ 0.33
ATXN2-227ENST00000616825 J3QLW9 94 aa17.12■□□□□ 0.33
ATXN2-227ENST00000616825 TNFRSF10BO14763 440 aa17.12■□□□□ 0.33
ATXN2-227ENST00000616825 TRAPPC6AO75865 159 aa17.12■□□□□ 0.33
ATXN2-227ENST00000616825 CLPXO76031 633 aa17.12■□□□□ 0.33
ATXN2-227ENST00000616825 ZNF19P17023 458 aa17.12■□□□□ 0.33
ATXN2-227ENST00000616825 C4orf46Q504U0 113 aa17.12■□□□□ 0.33
ATXN2-227ENST00000616825 PRRT3Q5FWE3 981 aa17.12■□□□□ 0.33
ATXN2-227ENST00000616825 NIPAL1Q6NVV3 410 aa17.12■□□□□ 0.33
ATXN2-227ENST00000616825 LMO3Q8TAP4 145 aa17.12■□□□□ 0.33
ATXN2-227ENST00000616825 THEM6Q8WUY1 208 aa17.12■□□□□ 0.33
ATXN2-227ENST00000616825 PNPLA2Q96AD5 504 aa17.12■□□□□ 0.33
ATXN2-227ENST00000616825 TMEM125Q96AQ2 219 aa17.12■□□□□ 0.33
ATXN2-227ENST00000616825 SLC22A4Q9H015 551 aa17.12■□□□□ 0.33
ATXN2-227ENST00000616825 TM9SF3Q9HD45 589 aa17.12■□□□□ 0.33
ATXN2-227ENST00000616825 B3GAT2Q9NPZ5 323 aa17.12■□□□□ 0.33
ATXN2-227ENST00000616825 TUBA8Q9NY65 449 aaPredicted RBP17.12■□□□□ 0.33
ATXN2-227ENST00000616825 ITGB1P05556 798 aa17.12■□□□□ 0.33
ATXN2-227ENST00000616825 SLC6A6P31641 620 aa17.12■□□□□ 0.33
ATXN2-227ENST00000616825 ACADVLP49748 655 aa17.12■□□□□ 0.33
ATXN2-227ENST00000616825 TPTEP56180 551 aa17.12■□□□□ 0.33
ATXN2-227ENST00000616825 PITX1P78337 314 aaPredicted RBP17.12■□□□□ 0.33
ATXN2-227ENST00000616825 TCEAL1Q15170 157 aa17.12■□□□□ 0.33
ATXN2-227ENST00000616825 IGDCC3Q8IVU1 814 aa17.12■□□□□ 0.33
ATXN2-227ENST00000616825 PLD6Q8N2A8 252 aaKnown RBP17.12■□□□□ 0.33
ATXN2-227ENST00000616825 RPF2Q9H7B2 306 aaKnown RBP17.12■□□□□ 0.33
ATXN2-227ENST00000616825 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.12■□□□□ 0.33
ATXN2-227ENST00000616825 TAS2R9Q9NYW1 312 aa17.12■□□□□ 0.33
ATXN2-227ENST00000616825 MED11Q9P086 117 aa17.12■□□□□ 0.33
ATXN2-227ENST00000616825 E7EQ34 232 aa17.12■□□□□ 0.33
ATXN2-227ENST00000616825 TSPAN6O43657 245 aa17.12■□□□□ 0.33
ATXN2-227ENST00000616825 HNRNPA1P09651 372 aaKnown RBP eCLIP17.12■□□□□ 0.33
ATXN2-227ENST00000616825 HRH2P25021 359 aa17.12■□□□□ 0.33
ATXN2-227ENST00000616825 RBM34P42696 430 aaKnown RBP17.12■□□□□ 0.33
ATXN2-227ENST00000616825 SLC3A1Q07837 685 aa17.12■□□□□ 0.33
ATXN2-227ENST00000616825 KCNH6Q9H252 994 aa17.12■□□□□ 0.33
ATXN2-227ENST00000616825 CREBZFQ9NS37 354 aa17.12■□□□□ 0.33
ATXN2-227ENST00000616825 C2orf92A0A1B0GVN3 265 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms