RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 ARMC2Q8NEN0 867 aa16.71■□□□□ 0.27
TRAPPC3-209ENST00000616395 FLVCR1-AS1Q8TAF5 88 aa16.71■□□□□ 0.27
TRAPPC3-209ENST00000616395 BRIX1Q8TDN6 353 aaKnown RBP16.71■□□□□ 0.27
TRAPPC3-209ENST00000616395 SCYL1Q96KG9 808 aa16.71■□□□□ 0.27
TRAPPC3-209ENST00000616395 TREX2Q9BQ50 279 aaPredicted RBP16.71■□□□□ 0.27
TRAPPC3-209ENST00000616395 MCMBPQ9BTE3 642 aa16.71■□□□□ 0.27
TRAPPC3-209ENST00000616395 MANSC1Q9H8J5 431 aa16.71■□□□□ 0.27
TRAPPC3-209ENST00000616395 TAS2R13Q9NYV9 303 aa16.71■□□□□ 0.27
TRAPPC3-209ENST00000616395 NXT1Q9UKK6 140 aaKnown RBP16.71■□□□□ 0.27
TRAPPC3-209ENST00000616395 MEMO1Q9Y316 297 aa16.71■□□□□ 0.27
TRAPPC3-209ENST00000616395 PRSS21Q9Y6M0 314 aa16.71■□□□□ 0.27
TRAPPC3-209ENST00000616395 IGLV3-16A0A075B6K0 115 aa16.7■□□□□ 0.26
TRAPPC3-209ENST00000616395 A0A0J9YY10 115 aa16.7■□□□□ 0.26
TRAPPC3-209ENST00000616395 KLF11O14901 512 aa16.7■□□□□ 0.26
TRAPPC3-209ENST00000616395 VPS26AO75436 327 aa16.7■□□□□ 0.26
TRAPPC3-209ENST00000616395 ACPPP15309 386 aa16.7■□□□□ 0.26
TRAPPC3-209ENST00000616395 TAC1P20366 129 aa16.7■□□□□ 0.26
TRAPPC3-209ENST00000616395 PDHA2P29803 388 aa16.7■□□□□ 0.26
TRAPPC3-209ENST00000616395 SKIV2L2P42285 1042 aaKnown RBP16.7■□□□□ 0.26
TRAPPC3-209ENST00000616395 SERPINB4P48594 390 aa16.7■□□□□ 0.26
TRAPPC3-209ENST00000616395 PRLHRP49683 370 aa16.7■□□□□ 0.26
TRAPPC3-209ENST00000616395 SEC24CP53992 1094 aa16.7■□□□□ 0.26
TRAPPC3-209ENST00000616395 PDAP1Q13442 181 aaKnown RBP16.7■□□□□ 0.26
TRAPPC3-209ENST00000616395 BOP1Q14137 746 aaKnown RBP16.7■□□□□ 0.26
TRAPPC3-209ENST00000616395 HECTD2Q5U5R9 776 aa16.7■□□□□ 0.26
TRAPPC3-209ENST00000616395 LDB1Q86U70 411 aaPredicted RBP16.7■□□□□ 0.26
TRAPPC3-209ENST00000616395 TGIF2LYQ8IUE0 185 aa16.7■□□□□ 0.26
TRAPPC3-209ENST00000616395 ZNF473Q8WTR7 871 aaKnown RBP16.7■□□□□ 0.26
TRAPPC3-209ENST00000616395 ZNF75CPQ92670 426 aaPredicted RBP16.7■□□□□ 0.26
TRAPPC3-209ENST00000616395 C8orf44Q96CB5 159 aa16.7■□□□□ 0.26
TRAPPC3-209ENST00000616395 CCDC126Q96EE4 140 aa16.7■□□□□ 0.26
TRAPPC3-209ENST00000616395 MAGED4Q96JG8 741 aa16.7■□□□□ 0.26
TRAPPC3-209ENST00000616395 CRB3Q9BUF7 120 aa16.7■□□□□ 0.26
TRAPPC3-209ENST00000616395 GSX1Q9H4S2 264 aaPredicted RBP16.7■□□□□ 0.26
TRAPPC3-209ENST00000616395 COG4Q9H9E3 785 aa16.7■□□□□ 0.26
TRAPPC3-209ENST00000616395 GPAMQ9HCL2 828 aa16.7■□□□□ 0.26
TRAPPC3-209ENST00000616395 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.7■□□□□ 0.26
TRAPPC3-209ENST00000616395 SLC17A7Q9P2U7 560 aa16.7■□□□□ 0.26
TRAPPC3-209ENST00000616395 MRPS2Q9Y399 296 aaKnown RBP16.7■□□□□ 0.26
TRAPPC3-209ENST00000616395 VSTM2BA6NLU5 285 aa16.7■□□□□ 0.26
TRAPPC3-209ENST00000616395 CFAP99D6REC4 459 aa16.7■□□□□ 0.26
TRAPPC3-209ENST00000616395 E5RI56 91 aa16.7■□□□□ 0.26
TRAPPC3-209ENST00000616395 WDPCPO95876 746 aa16.7■□□□□ 0.26
TRAPPC3-209ENST00000616395 ESR1P03372 595 aa16.7■□□□□ 0.26
TRAPPC3-209ENST00000616395 CHRM5P08912 532 aaPredicted RBP16.7■□□□□ 0.26
TRAPPC3-209ENST00000616395 RBP1P09455 135 aa16.7■□□□□ 0.26
TRAPPC3-209ENST00000616395 PRR35P0CG20 571 aa16.7■□□□□ 0.26
TRAPPC3-209ENST00000616395 DHRS4L1P0CG22 281 aa16.7■□□□□ 0.26
TRAPPC3-209ENST00000616395 RALBP11234 206 aa16.7■□□□□ 0.26
TRAPPC3-209ENST00000616395 ATP1B2P14415 290 aaPredicted RBP16.7■□□□□ 0.26
TRAPPC3-209ENST00000616395 GRK2P25098 689 aa16.7■□□□□ 0.26
TRAPPC3-209ENST00000616395 ARSFP54793 590 aa16.7■□□□□ 0.26
TRAPPC3-209ENST00000616395 CNSTQ6PJW8 725 aa16.7■□□□□ 0.26
TRAPPC3-209ENST00000616395 CMC1Q7Z7K0 106 aa16.7■□□□□ 0.26
TRAPPC3-209ENST00000616395 METTL27Q8N6F8 245 aaPredicted RBP16.7■□□□□ 0.26
TRAPPC3-209ENST00000616395 HEXDCQ8WVB3 486 aa16.7■□□□□ 0.26
TRAPPC3-209ENST00000616395 TFGQ92734 400 aaPredicted RBP16.7■□□□□ 0.26
TRAPPC3-209ENST00000616395 TSSK1BQ9BXA7 367 aa16.7■□□□□ 0.26
TRAPPC3-209ENST00000616395 NMRAL1Q9HBL8 299 aa16.7■□□□□ 0.26
TRAPPC3-209ENST00000616395 MARCH4Q9P2E8 410 aaPredicted RBP16.7■□□□□ 0.26
TRAPPC3-209ENST00000616395 RUVBL2Q9Y230 463 aaKnown RBP16.7■□□□□ 0.26
TRAPPC3-209ENST00000616395 ZNF835Q9Y2P0 537 aa16.7■□□□□ 0.26
TRAPPC3-209ENST00000616395 ZNF469Q96JG9 3925 aaPredicted RBP16.69■□□□□ 0.26
TRAPPC3-209ENST00000616395 CCDC189A1A4V9 331 aa16.69■□□□□ 0.26
TRAPPC3-209ENST00000616395 DSCR3O14972 297 aa16.69■□□□□ 0.26
TRAPPC3-209ENST00000616395 OR1I1O60431 355 aa16.69■□□□□ 0.26
TRAPPC3-209ENST00000616395 PLIN3O60664 434 aa16.69■□□□□ 0.26
TRAPPC3-209ENST00000616395 PRAMEF2O60811 474 aa16.69■□□□□ 0.26
TRAPPC3-209ENST00000616395 SNUPNO95149 360 aaKnown RBP16.69■□□□□ 0.26
TRAPPC3-209ENST00000616395 KLHL2O95198 593 aa16.69■□□□□ 0.26
TRAPPC3-209ENST00000616395 LTA4HP09960 611 aaKnown RBP16.69■□□□□ 0.26
TRAPPC3-209ENST00000616395 MYL2P10916 166 aa16.69■□□□□ 0.26
TRAPPC3-209ENST00000616395 CPA3P15088 417 aa16.69■□□□□ 0.26
TRAPPC3-209ENST00000616395 KLK2P20151 261 aa16.69■□□□□ 0.26
TRAPPC3-209ENST00000616395 DNAJA1P31689 397 aaKnown RBP16.69■□□□□ 0.26
TRAPPC3-209ENST00000616395 SHMT2P34897 504 aa16.69■□□□□ 0.26
TRAPPC3-209ENST00000616395 ETV4P43268 484 aa16.69■□□□□ 0.26
TRAPPC3-209ENST00000616395 OR1D4P47884 311 aa16.69■□□□□ 0.26
TRAPPC3-209ENST00000616395 ADARP55265 1226 aaKnown RBP16.69■□□□□ 0.26
TRAPPC3-209ENST00000616395 ZKSCAN8Q15776 578 aaPredicted RBP16.69■□□□□ 0.26
TRAPPC3-209ENST00000616395 NAPRTQ6XQN6 538 aa16.69■□□□□ 0.26
TRAPPC3-209ENST00000616395 Q6ZPB1 254 aaPredicted RBP16.69■□□□□ 0.26
TRAPPC3-209ENST00000616395 PRSS58Q8IYP2 241 aa16.69■□□□□ 0.26
TRAPPC3-209ENST00000616395 LRRC34Q8IZ02 419 aa16.69■□□□□ 0.26
TRAPPC3-209ENST00000616395 NKAPQ8N5F7 415 aaKnown RBP16.69■□□□□ 0.26
TRAPPC3-209ENST00000616395 CCDC197Q8NCU1 140 aa16.69■□□□□ 0.26
TRAPPC3-209ENST00000616395 NRGNQ92686 78 aa16.69■□□□□ 0.26
TRAPPC3-209ENST00000616395 ZNF317Q96PQ6 595 aaPredicted RBP16.69■□□□□ 0.26
TRAPPC3-209ENST00000616395 CAB39LQ9H9S4 337 aa16.69■□□□□ 0.26
TRAPPC3-209ENST00000616395 TNFRSF10DQ9UBN6 386 aa16.69■□□□□ 0.26
TRAPPC3-209ENST00000616395 GNPTGQ9UJJ9 305 aa16.69■□□□□ 0.26
TRAPPC3-209ENST00000616395 CACNA1CQ13936 2221 aa16.68■□□□□ 0.26
TRAPPC3-209ENST00000616395 NSG1A0A0A6YYJ2 146 aa16.68■□□□□ 0.26
TRAPPC3-209ENST00000616395 WDR91A4D1P6 747 aa16.68■□□□□ 0.26
TRAPPC3-209ENST00000616395 TMEM200CA6NKL6 621 aa16.68■□□□□ 0.26
TRAPPC3-209ENST00000616395 BPGMP07738 259 aa16.68■□□□□ 0.26
TRAPPC3-209ENST00000616395 PKMP14618 531 aaKnown RBP16.68■□□□□ 0.26
TRAPPC3-209ENST00000616395 CD9P21926 228 aa16.68■□□□□ 0.26
TRAPPC3-209ENST00000616395 GABRB3P28472 473 aa16.68■□□□□ 0.26
TRAPPC3-209ENST00000616395 NSG1P42857 185 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms