RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-231	ENST00000616390	OR52E4	Q8NGH9	312 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	TIFA	Q96CG3	184 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	TM9SF3	Q9HD45	589 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	FAM120C	Q9NX05	1096 aa	Known RBP	13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	THUMPD1	Q9NXG2	353 aa	Known RBP	13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	GULP1	Q9UBP9	304 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	LOC105371267	A0A1B0GV96	52 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	SLC5A10	A0PJK1	596 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	NPC1	O15118	1278 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	AP2A2	O94973	939 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	FADS2	O95864	444 aa	Known RBP	13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	DNAJA1	P31689	397 aa	Known RBP	13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	MMP12	P39900	470 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	HNF4A	P41235	474 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	GPR1	P46091	355 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	PRLHR	P49683	370 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	MLLT10	P55197	1068 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	HSD17B7	P56937	341 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	C21orf59	P57076	290 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	NPTX1	Q15818	432 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	GPR153	Q6NV75	609 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	B3GNT8	Q7Z7M8	397 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	NPAS3	Q8IXF0	933 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	MMP21	Q8N119	569 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	MRPL43	Q8N983	215 aa	Known RBP	13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	OR8J2	Q8NGG1	315 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	WDR48	Q8TAF3	677 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	NXPE3	Q969Y0	559 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	KCNC2	Q96PR1	638 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	SPNS1	Q9H2V7	528 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	TPK1	Q9H3S4	243 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	ARMC7	Q9H6L4	198 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	CDH7	Q9ULB5	785 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	MAP4K5	Q9Y4K4	846 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	MYO10	Q9HD67	2058 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	SUV39H1	O43463	412 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	LZTS3	O60299	673 aa	Predicted RBP	13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	C6orf47	O95873	294 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	LINC00271	P0C7V0	271 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	PSMB9	P28065	219 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	RRM2	P31350	389 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	SLC6A11	P48066	632 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	BMX	P51813	675 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	TMBIM6	P55061	237 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	GP2	P55259	537 aa	Known RBP	13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	AQP6	Q13520	282 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	NFE2L1	Q14494	772 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	RGN	Q15493	299 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	WDR45B	Q5MNZ6	344 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	MED27	Q6P2C8	311 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	C12orf76	Q8N812	135 aa	Predicted RBP	13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	TERB1	Q8NA31	727 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	SPACA7	Q96KW9	195 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	TRIM39	Q9HCM9	518 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	PRDM8	Q9NQV8	689 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	TBC1D14	Q9P2M4	693 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	PSME2	Q9UL46	239 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	PLXNA2	O75051	1894 aa		13.34	□□□□□ -0.27
CACNA1C-231	ENST00000616390		H0YIV9	168 aa		13.34	□□□□□ -0.27
CACNA1C-231	ENST00000616390	ZNF197	O14709	1029 aa		13.34	□□□□□ -0.27
CACNA1C-231	ENST00000616390	NDUFS2	O75306	463 aa		13.34	□□□□□ -0.27
CACNA1C-231	ENST00000616390	C1orf105	O95561	183 aa		13.34	□□□□□ -0.27
CACNA1C-231	ENST00000616390	VIP	P01282	170 aa		13.34	□□□□□ -0.27
CACNA1C-231	ENST00000616390	IDS	P22304	550 aa		13.34	□□□□□ -0.27
CACNA1C-231	ENST00000616390	SOAT1	P35610	550 aa		13.34	□□□□□ -0.27
CACNA1C-231	ENST00000616390	HPCAL1	P37235	193 aa		13.34	□□□□□ -0.27
CACNA1C-231	ENST00000616390	MAGEA2	P43356	314 aa		13.34	□□□□□ -0.27
CACNA1C-231	ENST00000616390	HBA1	P69905	142 aa		13.34	□□□□□ -0.27
CACNA1C-231	ENST00000616390	C2orf80	Q0P641	193 aa		13.34	□□□□□ -0.27
CACNA1C-231	ENST00000616390	ATP1A4	Q13733	1029 aa		13.34	□□□□□ -0.27
CACNA1C-231	ENST00000616390	TUBA3C	Q13748	450 aa		13.34	□□□□□ -0.27
CACNA1C-231	ENST00000616390	FNDC3B	Q53EP0	1204 aa	Known RBP	13.34	□□□□□ -0.27
CACNA1C-231	ENST00000616390	DHRS4L2	Q6PKH6	230 aa		13.34	□□□□□ -0.27
CACNA1C-231	ENST00000616390	DPPA4	Q7L190	304 aa		13.34	□□□□□ -0.27
CACNA1C-231	ENST00000616390	SLC15A4	Q8N697	577 aa		13.34	□□□□□ -0.27
CACNA1C-231	ENST00000616390	GIPC3	Q8TF64	312 aa		13.34	□□□□□ -0.27
CACNA1C-231	ENST00000616390	RAB2B	Q8WUD1	216 aa		13.34	□□□□□ -0.27
CACNA1C-231	ENST00000616390	MRPS23	Q9Y3D9	190 aa	Known RBP	13.34	□□□□□ -0.27
CACNA1C-231	ENST00000616390	CORIN	Q9Y5Q5	1042 aa		13.34	□□□□□ -0.27
CACNA1C-231	ENST00000616390	LTBP2	Q14767	1821 aa		13.34	□□□□□ -0.27
CACNA1C-231	ENST00000616390	PRRT4	C9JH25	899 aa		13.34	□□□□□ -0.27
CACNA1C-231	ENST00000616390	SLC16A6	O15403	523 aa		13.34	□□□□□ -0.27
CACNA1C-231	ENST00000616390	FAM20B	O75063	409 aa		13.34	□□□□□ -0.27
CACNA1C-231	ENST00000616390	UGT2B11	O75310	529 aa		13.34	□□□□□ -0.27
CACNA1C-231	ENST00000616390	BCAS1	O75363	584 aa	Predicted RBP	13.34	□□□□□ -0.27
CACNA1C-231	ENST00000616390	KLK1	P06870	262 aa		13.34	□□□□□ -0.27
CACNA1C-231	ENST00000616390	POU2F1	P14859	743 aa		13.34	□□□□□ -0.27
CACNA1C-231	ENST00000616390	NPPB	P16860	134 aa		13.34	□□□□□ -0.27
CACNA1C-231	ENST00000616390	JUNB	P17275	347 aa	Predicted RBP	13.34	□□□□□ -0.27
CACNA1C-231	ENST00000616390	DGKE	P52429	567 aa		13.34	□□□□□ -0.27
CACNA1C-231	ENST00000616390	DCDC1	P59894	354 aa		13.34	□□□□□ -0.27
CACNA1C-231	ENST00000616390	CYP4F2	P78329	520 aa		13.34	□□□□□ -0.27
CACNA1C-231	ENST00000616390	GRSF1	Q12849	480 aa	Known RBP eCLIP	13.34	□□□□□ -0.27
CACNA1C-231	ENST00000616390	KCNC3	Q14003	757 aa		13.34	□□□□□ -0.27
CACNA1C-231	ENST00000616390	GTF2IRD2B	Q6EKJ0	949 aa		13.34	□□□□□ -0.27
CACNA1C-231	ENST00000616390	CAPN13	Q6MZZ7	669 aa	Predicted RBP	13.34	□□□□□ -0.27
CACNA1C-231	ENST00000616390	SLCO4C1	Q6ZQN7	724 aa		13.34	□□□□□ -0.27
CACNA1C-231	ENST00000616390	CBLL1	Q75N03	491 aa		13.34	□□□□□ -0.27
CACNA1C-231	ENST00000616390	EIF3M	Q7L2H7	374 aa	Known RBP	13.34	□□□□□ -0.27
CACNA1C-231	ENST00000616390	GTF2IRD2	Q86UP8	949 aa		13.34	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms