RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 MINDY4Q4G0A6 757 aa17.88■□□□□ 0.45
CDX1-202ENST00000616154 SP5Q6BEB4 398 aaPredicted RBP17.88■□□□□ 0.45
CDX1-202ENST00000616154 PLAG1Q6DJT9 500 aa17.88■□□□□ 0.45
CDX1-202ENST00000616154 TMEM214Q6NUQ4 689 aaKnown RBP17.88■□□□□ 0.45
CDX1-202ENST00000616154 EMBQ6PCB8 327 aa17.88■□□□□ 0.45
CDX1-202ENST00000616154 LCTLQ6UWM7 567 aa17.88■□□□□ 0.45
CDX1-202ENST00000616154 MBOAT1Q6ZNC8 495 aa17.88■□□□□ 0.45
CDX1-202ENST00000616154 LANCL3Q6ZV70 420 aa17.88■□□□□ 0.45
CDX1-202ENST00000616154 PRSS41Q7RTY9 318 aa17.88■□□□□ 0.45
CDX1-202ENST00000616154 OR51Q1Q8NH59 317 aa17.88■□□□□ 0.45
CDX1-202ENST00000616154 CAVIN3Q969G5 261 aa17.88■□□□□ 0.45
CDX1-202ENST00000616154 FBXL8Q96CD0 374 aa17.88■□□□□ 0.45
CDX1-202ENST00000616154 CYTH2Q99418 400 aa17.88■□□□□ 0.45
CDX1-202ENST00000616154 SARGQ9BW04 601 aa17.88■□□□□ 0.45
CDX1-202ENST00000616154 STMN3Q9NZ72 180 aa17.88■□□□□ 0.45
CDX1-202ENST00000616154 IGHV3-20A0A0C4DH32 117 aa17.87■□□□□ 0.45
CDX1-202ENST00000616154 FAM95CA0A1B0GW59 222 aa17.87■□□□□ 0.45
CDX1-202ENST00000616154 FAM159BA6NKW6 160 aa17.87■□□□□ 0.45
CDX1-202ENST00000616154 UNC5CO95185 931 aa17.87■□□□□ 0.45
CDX1-202ENST00000616154 HIST1H2AGP0C0S8 130 aaPredicted RBP17.87■□□□□ 0.45
CDX1-202ENST00000616154 HIST1H2ADP20671 130 aa17.87■□□□□ 0.45
CDX1-202ENST00000616154 BCL6P41182 706 aa17.87■□□□□ 0.45
CDX1-202ENST00000616154 MAGEA4P43358 317 aa17.87■□□□□ 0.45
CDX1-202ENST00000616154 XCR1P46094 333 aa17.87■□□□□ 0.45
CDX1-202ENST00000616154 PGGT1BP53609 377 aa17.87■□□□□ 0.45
CDX1-202ENST00000616154 TAS2R39P59534 338 aa17.87■□□□□ 0.45
CDX1-202ENST00000616154 CSNK1G2P78368 415 aa17.87■□□□□ 0.45
CDX1-202ENST00000616154 ART3Q13508 389 aa17.87■□□□□ 0.45
CDX1-202ENST00000616154 SLMAPQ14BN4 828 aa17.87■□□□□ 0.45
CDX1-202ENST00000616154 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.87■□□□□ 0.45
CDX1-202ENST00000616154 MFSD4BQ5TF39 518 aa17.87■□□□□ 0.45
CDX1-202ENST00000616154 NKAPQ8N5F7 415 aaKnown RBP17.87■□□□□ 0.45
CDX1-202ENST00000616154 ABHD11Q8NFV4 315 aa17.87■□□□□ 0.45
CDX1-202ENST00000616154 ITLN2Q8WWU7 325 aaPredicted RBP17.87■□□□□ 0.45
CDX1-202ENST00000616154 TM4SF19Q96DZ7 209 aa17.87■□□□□ 0.45
CDX1-202ENST00000616154 VPS39Q96JC1 886 aa17.87■□□□□ 0.45
CDX1-202ENST00000616154 HIST1H2AHQ96KK5 128 aa17.87■□□□□ 0.45
CDX1-202ENST00000616154 HIST1H2AJQ99878 128 aa17.87■□□□□ 0.45
CDX1-202ENST00000616154 H2AFJQ9BTM1 129 aa17.87■□□□□ 0.45
CDX1-202ENST00000616154 SAYSD1Q9NPB0 183 aa17.87■□□□□ 0.45
CDX1-202ENST00000616154 HCN3Q9P1Z3 774 aa17.87■□□□□ 0.45
CDX1-202ENST00000616154 SUCOQ9UBS9 1254 aaKnown RBP17.87■□□□□ 0.45
CDX1-202ENST00000616154 SEC14L3Q9UDX4 400 aa17.87■□□□□ 0.45
CDX1-202ENST00000616154 IKZF3Q9UKT9 509 aa17.87■□□□□ 0.45
CDX1-202ENST00000616154 TRGV8A0A0C4DH27 118 aa17.86■□□□□ 0.45
CDX1-202ENST00000616154 TCRBV9S1A1TA0A576 114 aa17.86■□□□□ 0.45
CDX1-202ENST00000616154 PRF1P14222 555 aa17.86■□□□□ 0.45
CDX1-202ENST00000616154 NPPBP16860 134 aa17.86■□□□□ 0.45
CDX1-202ENST00000616154 IL1RNP18510 177 aa17.86■□□□□ 0.45
CDX1-202ENST00000616154 SSTR1P30872 391 aa17.86■□□□□ 0.45
CDX1-202ENST00000616154 CDKL1Q00532 357 aa17.86■□□□□ 0.45
CDX1-202ENST00000616154 NAE1Q13564 534 aa17.86■□□□□ 0.45
CDX1-202ENST00000616154 BTBD16Q32M84 506 aa17.86■□□□□ 0.45
CDX1-202ENST00000616154 H3F3CQ6NXT2 135 aa17.86■□□□□ 0.45
CDX1-202ENST00000616154 ANKRD37Q7Z713 158 aa17.86■□□□□ 0.45
CDX1-202ENST00000616154 SRRM1Q8IYB3 904 aaKnown RBP17.86■□□□□ 0.45
CDX1-202ENST00000616154 SHISA5Q8N114 240 aa17.86■□□□□ 0.45
CDX1-202ENST00000616154 CAMKVQ8NCB2 501 aa17.86■□□□□ 0.45
CDX1-202ENST00000616154 OR4K1Q8NGD4 311 aa17.86■□□□□ 0.45
CDX1-202ENST00000616154 ATL1Q8WXF7 558 aa17.86■□□□□ 0.45
CDX1-202ENST00000616154 ZNF354BQ96LW1 612 aa17.86■□□□□ 0.45
CDX1-202ENST00000616154 MACROD1Q9BQ69 325 aa17.86■□□□□ 0.45
CDX1-202ENST00000616154 HAUS8Q9BT25 410 aa17.86■□□□□ 0.45
CDX1-202ENST00000616154 TRIM54Q9BYV2 358 aa17.86■□□□□ 0.45
CDX1-202ENST00000616154 ANKHQ9HCJ1 492 aa17.86■□□□□ 0.45
CDX1-202ENST00000616154 ARL15Q9NXU5 204 aa17.86■□□□□ 0.45
CDX1-202ENST00000616154 SH2B3Q9UQQ2 575 aa17.86■□□□□ 0.45
CDX1-202ENST00000616154 PCDHGB6Q9Y5F9 930 aa17.86■□□□□ 0.45
CDX1-202ENST00000616154 KLF2Q9Y5W3 355 aaPredicted RBP17.86■□□□□ 0.45
CDX1-202ENST00000616154 PKDREJQ9NTG1 2253 aa17.85■□□□□ 0.45
CDX1-202ENST00000616154 A8MUI8 341 aa17.85■□□□□ 0.45
CDX1-202ENST00000616154 SGK494L7N484 410 aa17.85■□□□□ 0.45
CDX1-202ENST00000616154 H2AFXP16104 143 aaPredicted RBP17.85■□□□□ 0.45
CDX1-202ENST00000616154 CA7P43166 264 aa17.85■□□□□ 0.45
CDX1-202ENST00000616154 AGTR2P50052 363 aa17.85■□□□□ 0.45
CDX1-202ENST00000616154 GPX6P59796 221 aa17.85■□□□□ 0.45
CDX1-202ENST00000616154 POU4F1Q01851 419 aa17.85■□□□□ 0.45
CDX1-202ENST00000616154 ZNF766Q5HY98 468 aa17.85■□□□□ 0.45
CDX1-202ENST00000616154 CAPN13Q6MZZ7 669 aaPredicted RBP17.85■□□□□ 0.45
CDX1-202ENST00000616154 MTFR2Q6P444 385 aa17.85■□□□□ 0.45
CDX1-202ENST00000616154 ASPGQ86U10 573 aa17.85■□□□□ 0.45
CDX1-202ENST00000616154 CCDC25Q86WR0 208 aa17.85■□□□□ 0.45
CDX1-202ENST00000616154 C17orf64Q86WR6 236 aa17.85■□□□□ 0.45
CDX1-202ENST00000616154 BEST3Q8N1M1 668 aa17.85■□□□□ 0.45
CDX1-202ENST00000616154 MREGQ8N565 214 aa17.85■□□□□ 0.45
CDX1-202ENST00000616154 ZCCHC10Q8TBK6 192 aa17.85■□□□□ 0.45
CDX1-202ENST00000616154 CDKL2Q92772 493 aa17.85■□□□□ 0.45
CDX1-202ENST00000616154 CCDC120Q96HB5 630 aa17.85■□□□□ 0.45
CDX1-202ENST00000616154 GPR22Q99680 433 aa17.85■□□□□ 0.45
CDX1-202ENST00000616154 CPNE1Q99829 537 aa17.85■□□□□ 0.45
CDX1-202ENST00000616154 FUT8Q9BYC5 575 aa17.85■□□□□ 0.45
CDX1-202ENST00000616154 UNKQ9C0B0 810 aaKnown RBP17.85■□□□□ 0.45
CDX1-202ENST00000616154 ATG10Q9H0Y0 220 aa17.85■□□□□ 0.45
CDX1-202ENST00000616154 CXorf49A8MYA2 514 aaPredicted RBP17.84■□□□□ 0.45
CDX1-202ENST00000616154 PMP22Q01453 160 aa17.84■□□□□ 0.45
CDX1-202ENST00000616154 RBPJQ06330 500 aa17.84■□□□□ 0.45
CDX1-202ENST00000616154 EXT1Q16394 746 aa17.84■□□□□ 0.45
CDX1-202ENST00000616154 ACER2Q5QJU3 275 aa17.84■□□□□ 0.45
CDX1-202ENST00000616154 TRMT10CQ7L0Y3 403 aaKnown RBP17.84■□□□□ 0.45
CDX1-202ENST00000616154 PDSS2Q86YH6 399 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 315.6 ms