RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 PRDM5Q9NQX1 630 aaPredicted RBP12.69□□□□□ -0.38
MSH6-214ENST00000616033 CTPS2Q9NRF8 586 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 GKN1Q9NS71 199 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 OLA1Q9NTK5 396 aaKnown RBP12.69□□□□□ -0.38
MSH6-214ENST00000616033 TMEM161AQ9NX61 479 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 A0A0G2JMP0 313 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 GNG14A0A1W2PPG7 69 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 SLC35F4A4IF30 521 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 PCDH7O60245 1069 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 HKDC1Q2TB90 917 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 RNASE12Q5GAN4 147 aaKnown RBP12.69□□□□□ -0.38
MSH6-214ENST00000616033 C22orf42Q6IC83 251 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 PLET1Q6UQ28 207 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 NAGSQ8N159 534 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 PIH1D2Q8WWB5 315 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 KCNJ9Q92806 393 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 TRIM63Q969Q1 353 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 PKP4Q99569 1192 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 BARHL1Q9BZE3 327 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 POLR2J2Q9GZM3 115 aaKnown RBP12.69□□□□□ -0.38
MSH6-214ENST00000616033 EVA1BQ9NVM1 165 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 MAP4K5Q9Y4K4 846 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 PITPNM1O00562 1244 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 CYP17A1P05093 508 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 TIE1P35590 1138 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 SOAT1P35610 550 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 PRIM2P49643 509 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 ZNF157P51786 506 aaPredicted RBP12.69□□□□□ -0.38
MSH6-214ENST00000616033 SCN1BQ07699 218 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 QPRTQ15274 297 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 TBCEQ15813 527 aaPredicted RBP12.69□□□□□ -0.38
MSH6-214ENST00000616033 ZNF792Q3KQV3 632 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 TYW3Q6IPR3 259 aaKnown RBP12.69□□□□□ -0.38
MSH6-214ENST00000616033 SZRD1Q7Z422 152 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 SLC7A6Q92536 515 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 FCGR1BQ92637 280 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 TRMT61AQ96FX7 289 aaKnown RBP12.69□□□□□ -0.38
MSH6-214ENST00000616033 MCCC1Q96RQ3 725 aaPredicted RBP12.69□□□□□ -0.38
MSH6-214ENST00000616033 TRIM62Q9BVG3 475 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 ZNF226Q9NYT6 803 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 RAB23Q9ULC3 237 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 CCL27Q9Y4X3 112 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 CKAP5Q14008 2032 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 A0A1W2PQL4 384 aaPredicted RBP12.68□□□□□ -0.38
MSH6-214ENST00000616033 WNT9AO14904 365 aa12.68□□□□□ -0.38
MSH6-214ENST00000616033 PLD2O14939 933 aa12.68□□□□□ -0.38
MSH6-214ENST00000616033 CAPN5O15484 640 aaPredicted RBP12.68□□□□□ -0.38
MSH6-214ENST00000616033 ETFAP13804 333 aa12.68□□□□□ -0.38
MSH6-214ENST00000616033 TACR2P21452 398 aa12.68□□□□□ -0.38
MSH6-214ENST00000616033 ACVR1Q04771 509 aa12.68□□□□□ -0.38
MSH6-214ENST00000616033 FAM171BQ6P995 826 aa12.68□□□□□ -0.38
MSH6-214ENST00000616033 ZZZ3Q8IYH5 903 aa12.68□□□□□ -0.38
MSH6-214ENST00000616033 RIT1Q92963 219 aa12.68□□□□□ -0.38
MSH6-214ENST00000616033 C1GALT1C1Q96EU7 318 aa12.68□□□□□ -0.38
MSH6-214ENST00000616033 HRASLS5Q96KN8 279 aa12.68□□□□□ -0.38
MSH6-214ENST00000616033 FRMD6Q96NE9 622 aa12.68□□□□□ -0.38
MSH6-214ENST00000616033 HDHD5Q9BXW7 423 aa12.68□□□□□ -0.38
MSH6-214ENST00000616033 SNX7Q9UNH6 387 aa12.68□□□□□ -0.38
MSH6-214ENST00000616033 DHRS7Q9Y394 339 aa12.68□□□□□ -0.38
MSH6-214ENST00000616033 RHOCP08134 193 aa12.68□□□□□ -0.38
MSH6-214ENST00000616033 CNR2P34972 360 aa12.68□□□□□ -0.38
MSH6-214ENST00000616033 GGT2P36268 569 aa12.68□□□□□ -0.38
MSH6-214ENST00000616033 CXCL17Q6UXB2 119 aa12.68□□□□□ -0.38
MSH6-214ENST00000616033 CCDC190Q86UF4 302 aa12.68□□□□□ -0.38
MSH6-214ENST00000616033 HS6ST3Q8IZP7 471 aa12.68□□□□□ -0.38
MSH6-214ENST00000616033 GHDCQ8N2G8 530 aa12.68□□□□□ -0.38
MSH6-214ENST00000616033 SYT14Q8NB59 555 aa12.68□□□□□ -0.38
MSH6-214ENST00000616033 MED8Q96G25 268 aa12.68□□□□□ -0.38
MSH6-214ENST00000616033 MS4A4AQ96JQ5 239 aa12.68□□□□□ -0.38
MSH6-214ENST00000616033 ADGRE3Q9BY15 652 aa12.68□□□□□ -0.38
MSH6-214ENST00000616033 MRPS7Q9Y2R9 242 aaKnown RBP12.68□□□□□ -0.38
MSH6-214ENST00000616033 PCDHGB3Q9Y5G1 929 aa12.68□□□□□ -0.38
MSH6-214ENST00000616033 K7ERQ8 282 aa12.68□□□□□ -0.38
MSH6-214ENST00000616033 AOC2O75106 756 aa12.68□□□□□ -0.38
MSH6-214ENST00000616033 OR7A10O76100 309 aa12.68□□□□□ -0.38
MSH6-214ENST00000616033 ZNF7P17097 686 aaPredicted RBP12.68□□□□□ -0.38
MSH6-214ENST00000616033 UGT2B10P36537 528 aa12.68□□□□□ -0.38
MSH6-214ENST00000616033 CHRNEQ04844 493 aa12.68□□□□□ -0.38
MSH6-214ENST00000616033 XKR4Q5GH76 650 aa12.68□□□□□ -0.38
MSH6-214ENST00000616033 LDLRAD1Q5T700 205 aa12.68□□□□□ -0.38
MSH6-214ENST00000616033 ZNF57Q68EA5 555 aaPredicted RBP12.68□□□□□ -0.38
MSH6-214ENST00000616033 AQP11Q8NBQ7 271 aa12.68□□□□□ -0.38
MSH6-214ENST00000616033 ASB15Q8WXK1 588 aa12.68□□□□□ -0.38
MSH6-214ENST00000616033 YY2O15391 372 aa12.67□□□□□ -0.38
MSH6-214ENST00000616033 KLK8O60259 260 aa12.67□□□□□ -0.38
MSH6-214ENST00000616033 OR2B3O76000 313 aa12.67□□□□□ -0.38
MSH6-214ENST00000616033 TRBC1P01850 177 aa12.67□□□□□ -0.38
MSH6-214ENST00000616033 ICAM2P13598 275 aa12.67□□□□□ -0.38
MSH6-214ENST00000616033 ZNF250P15622 560 aa12.67□□□□□ -0.38
MSH6-214ENST00000616033 TNNI3P19429 210 aa12.67□□□□□ -0.38
MSH6-214ENST00000616033 APEX1P27695 318 aaKnown RBP12.67□□□□□ -0.38
MSH6-214ENST00000616033 PTGER3P43115 390 aa12.67□□□□□ -0.38
MSH6-214ENST00000616033 SGSHP51688 502 aa12.67□□□□□ -0.38
MSH6-214ENST00000616033 MAPK12P53778 367 aa12.67□□□□□ -0.38
MSH6-214ENST00000616033 PTGES3Q15185 160 aaKnown RBP12.67□□□□□ -0.38
MSH6-214ENST00000616033 PCBP2Q15366 365 aaKnown RBP eCLIP12.67□□□□□ -0.381e-7■■■■■ 32.2
MSH6-214ENST00000616033 TAF1CQ15572 869 aaPredicted RBP12.67□□□□□ -0.38
MSH6-214ENST00000616033 RNF219Q5W0B1 726 aaPredicted RBP12.67□□□□□ -0.38
MSH6-214ENST00000616033 B3GLCTQ6Y288 498 aa12.67□□□□□ -0.38
MSH6-214ENST00000616033 ZNF852Q6ZMS4 543 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms