RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 ZNF100Q8IYN0 542 aa9.4□□□□□ -0.91
TNFRSF9-204ENST00000615230 LMO3Q8TAP4 145 aa9.4□□□□□ -0.91
TNFRSF9-204ENST00000615230 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.4□□□□□ -0.91
TNFRSF9-204ENST00000615230 TRAPPC9Q96Q05 1148 aa9.4□□□□□ -0.91
TNFRSF9-204ENST00000615230 PEBP4Q96S96 227 aa9.4□□□□□ -0.91
TNFRSF9-204ENST00000615230 ZPBPQ9BS86 351 aa9.4□□□□□ -0.91
TNFRSF9-204ENST00000615230 PIGUQ9H490 435 aa9.4□□□□□ -0.91
TNFRSF9-204ENST00000615230 DDX28Q9NUL7 540 aaKnown RBP9.4□□□□□ -0.91
TNFRSF9-204ENST00000615230 TMEM45AQ9NWC5 275 aa9.4□□□□□ -0.91
TNFRSF9-204ENST00000615230 AJAP1Q9UKB5 411 aaPredicted RBP9.4□□□□□ -0.91
TNFRSF9-204ENST00000615230 MMP17Q9ULZ9 603 aa9.4□□□□□ -0.91
TNFRSF9-204ENST00000615230 A0A1W2PQ72 361 aa9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 ANKRD28O15084 1053 aa9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 IGFBP5P24593 272 aa9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 SLC6A6P31641 620 aa9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 UBAP2LQ14157 1087 aaKnown RBP9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 TTMPQ5BVD1 217 aa9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 FBXO42Q6P3S6 717 aa9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 TAS1R1Q7RTX1 841 aa9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 SCD5Q86SK9 330 aa9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 NPAS3Q8IXF0 933 aa9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 ESX1Q8N693 406 aa9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 CLPTM1LQ96KA5 538 aa9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 OR8D2Q9GZM6 311 aa9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 PRKAB1Q9Y478 270 aa9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 COL24A1Q17RW2 1714 aa9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 ZNF670-ZNF695F2Z2N8 137 aa9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 GMFGO60234 142 aa9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 F11P03951 625 aa9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 CHRNGP07510 517 aa9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 UBTFL6P0CB48 400 aaPredicted RBP9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 DRD4P21917 467 aa9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 CTSKP43235 329 aa9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 CCT3P49368 545 aaKnown RBP9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 INHBCP55103 352 aa9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 OGDHQ02218 1023 aa9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 TUBB3Q13509 450 aa9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 PPM1JQ5JR12 505 aa9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 CLEC6AQ6EIG7 209 aa9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 TANGO2Q6ICL3 276 aa9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 OR4F6Q8NGB9 312 aa9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 WASF3Q9UPY6 502 aa9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 ATP6AP2A0A1C7CYW4 349 aa9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 UBE2QL1A1L167 161 aa9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 TRIM43BA6NCK2 446 aa9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 OR51F1A6NGY5 319 aa9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 AGTR2P50052 363 aa9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 SEMG2Q02383 582 aa9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 TRIM43Q96BQ3 446 aaPredicted RBP9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 BCL2L14Q9BZR8 327 aa9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 CRISPLD2Q9H0B8 497 aa9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 RAB9BQ9NP90 201 aa9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 OR6C2Q9NZP2 312 aa9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 LOC730098B7Z3J9 87 aa9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 BTN3A3O00478 584 aa9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 BCL10O95999 233 aa9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 LINGO3P0C6S8 592 aa9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 ATF6P18850 670 aa9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 PRKCHP24723 683 aa9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 TBPL1P62380 186 aa9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 TGFBIQ15582 683 aa9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 LRRTM3Q86VH5 581 aa9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 EID2Q8N6I1 236 aa9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 DDHD1Q8NEL9 900 aa9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 GATA5Q9BWX5 397 aaPredicted RBP9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 LRRC3Q9BY71 257 aa9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 LINC00597Q9H2U6 94 aa9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 CHMP1AQ9HD42 196 aaPredicted RBP9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 SIPA1L3O60292 1781 aaPredicted RBP9.39□□□□□ -0.91
TNFRSF9-204ENST00000615230 C17orf113A0A1B0GUU1 675 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 ATP6AP2O75787 350 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 FAM155BO75949 473 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 PDE5AO76074 875 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 MTHFD1P11586 935 aaKnown RBP9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 HTR3AP46098 478 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 FAM174BQ3ZCQ3 159 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 SFRP1Q8N474 314 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 SPEM1Q8N4L4 309 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 OR6N1Q8NGY5 312 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 SNIP1Q8TAD8 396 aaKnown RBP9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 GNPDA2Q8TDQ7 276 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 PRR11Q96HE9 360 aaPredicted RBP9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 ZNF559Q9BR84 538 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 CRISPLD1Q9H336 500 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 BRF2Q9HAW0 419 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 PNPLA3Q9NST1 481 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 SESN1Q9Y6P5 492 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 SRPX2O60687 465 aaPredicted RBP9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 IRF2P14316 349 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 BMP8BP34820 402 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 PCYT1AP49585 367 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 GALK2Q01415 458 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 GK3PQ14409 553 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 GRIN2CQ14957 1233 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 GPR68Q15743 365 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 TMEM31Q5JXX7 168 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 SPANXN2Q5MJ10 180 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 CATSPEREQ5SY80 951 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 SLC25A24Q6NUK1 477 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms