RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 FBLP22087 321 aaKnown RBP5.38□□□□□ -1.55
CPNE3-208ENST00000614678 HSD17B3P37058 310 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 MSH2P43246 934 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 MAGEA12P43365 314 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 CCR8P51685 355 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 FOXA1P55317 472 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 BTN3A2P78410 334 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 REEP5Q00765 189 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 TLE1Q04724 770 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 DGAT2L6Q6ZPD8 337 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 SH2D5Q6ZV89 423 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 TBC1D1Q86TI0 1168 aaPredicted RBP5.38□□□□□ -1.55
CPNE3-208ENST00000614678 RELL1Q8IUW5 271 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 RBMXL3Q8N7X1 1067 aaKnown RBP5.38□□□□□ -1.55
CPNE3-208ENST00000614678 PTGR2Q8N8N7 351 aaPredicted RBP5.38□□□□□ -1.55
CPNE3-208ENST00000614678 MFSD9Q8NBP5 474 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 SIMC1Q8NDZ2 872 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 THAP3Q8WTV1 239 aaPredicted RBP5.38□□□□□ -1.55
CPNE3-208ENST00000614678 PSMF1Q92530 271 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 GPR87Q9BY21 358 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 HES7Q9BYE0 225 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 CD244Q9BZW8 370 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 CHRNA10Q9GZZ6 450 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 NECTIN3Q9NQS3 549 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 C5AR2Q9P296 337 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 NTNG1Q9Y2I2 539 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 NUP210LQ5VU65 1888 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 HRKO00198 91 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 CHST10O43529 356 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 SLC28A2O43868 658 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 KLHL2O95198 593 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 COX6A1P12074 109 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 EEF1DP29692 281 aaKnown RBP5.38□□□□□ -1.55
CPNE3-208ENST00000614678 AP1S2P56377 157 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 CDC16Q13042 620 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 MUM1Q2TAK8 710 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 ZNF750Q32MQ0 723 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 SGO1Q5FBB7 561 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 TOR1AIP1Q5JTV8 583 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 CES4AQ5XG92 561 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 HIST2H2BCQ6DN03 193 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 GOLGA7Q7Z5G4 137 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 ADAMTSL2Q86TH1 951 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 IFT20Q8IY31 132 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 RAB42Q8N4Z0 105 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 PDPRQ8NCN5 879 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 MIEF2Q96C03 454 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 WDR77Q9BQA1 342 aaPredicted RBP5.38□□□□□ -1.55
CPNE3-208ENST00000614678 NOL11Q9H8H0 719 aaKnown RBP5.38□□□□□ -1.55
CPNE3-208ENST00000614678 LANCL2Q9NS86 450 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 PTGFRNQ9P2B2 879 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 ZNF282Q9UDV7 671 aaPredicted RBP5.38□□□□□ -1.55
CPNE3-208ENST00000614678 POLEQ07864 2286 aa5.38□□□□□ -1.55
CPNE3-208ENST00000614678 TLDC2A0PJX2 215 aa5.37□□□□□ -1.55
CPNE3-208ENST00000614678 B8ZZF3 427 aa5.37□□□□□ -1.55
CPNE3-208ENST00000614678 C9J4A7 227 aa5.37□□□□□ -1.55
CPNE3-208ENST00000614678 UBFD1O14562 309 aaKnown RBP5.37□□□□□ -1.55
CPNE3-208ENST00000614678 MAP3K7O43318 606 aa5.37□□□□□ -1.55
CPNE3-208ENST00000614678 ERI3O43414 337 aaKnown RBP5.37□□□□□ -1.55
CPNE3-208ENST00000614678 KERAO60938 352 aa5.37□□□□□ -1.55
CPNE3-208ENST00000614678 LDB3O75112 727 aa5.37□□□□□ -1.55
CPNE3-208ENST00000614678 MT-ND3P03897 115 aa5.37□□□□□ -1.55
CPNE3-208ENST00000614678 ITGB2P05107 769 aa5.37□□□□□ -1.55
CPNE3-208ENST00000614678 C1GALT1C1LP0DN25 315 aa5.37□□□□□ -1.55
CPNE3-208ENST00000614678 ITGAMP11215 1152 aa5.37□□□□□ -1.55
CPNE3-208ENST00000614678 PCNAP12004 261 aa5.37□□□□□ -1.55
CPNE3-208ENST00000614678 GFAPP14136 432 aa5.37□□□□□ -1.55
CPNE3-208ENST00000614678 ITGA3P26006 1051 aa5.37□□□□□ -1.55
CPNE3-208ENST00000614678 SRSF1Q07955 248 aaKnown RBP eCLIP5.37□□□□□ -1.55
CPNE3-208ENST00000614678 PLEKHN1Q494U1 663 aaPredicted RBP5.37□□□□□ -1.55
CPNE3-208ENST00000614678 ZNF468Q5VIY5 522 aaPredicted RBP5.37□□□□□ -1.55
CPNE3-208ENST00000614678 ARMC3Q5W041 872 aa5.37□□□□□ -1.55
CPNE3-208ENST00000614678 ATG9BQ674R7 924 aa5.37□□□□□ -1.55
CPNE3-208ENST00000614678 LRRC8EQ6NSJ5 796 aa5.37□□□□□ -1.55
CPNE3-208ENST00000614678 ASB18Q6ZVZ8 466 aa5.37□□□□□ -1.55
CPNE3-208ENST00000614678 MS4A6EQ96DS6 147 aa5.37□□□□□ -1.55
CPNE3-208ENST00000614678 SCYL1Q96KG9 808 aa5.37□□□□□ -1.55
CPNE3-208ENST00000614678 TMEM237Q96Q45 408 aa5.37□□□□□ -1.55
CPNE3-208ENST00000614678 MECRQ9BV79 373 aa5.37□□□□□ -1.55
CPNE3-208ENST00000614678 FUT8Q9BYC5 575 aa5.37□□□□□ -1.55
CPNE3-208ENST00000614678 CORO1CQ9ULV4 474 aaPredicted RBP5.37□□□□□ -1.55
CPNE3-208ENST00000614678 ZNF407Q9C0G0 2248 aa5.37□□□□□ -1.55
CPNE3-208ENST00000614678 MYO7BQ6PIF6 2116 aa5.37□□□□□ -1.55
CPNE3-208ENST00000614678 LRIT2A6NDA9 550 aa5.37□□□□□ -1.55
CPNE3-208ENST00000614678 MAGEB17A8MXT2 336 aa5.37□□□□□ -1.55
CPNE3-208ENST00000614678 AGPSO00116 658 aa5.37□□□□□ -1.55
CPNE3-208ENST00000614678 EIF3FO00303 357 aaPredicted RBP5.37□□□□□ -1.55
CPNE3-208ENST00000614678 SUV39H1O43463 412 aa5.37□□□□□ -1.55
CPNE3-208ENST00000614678 GALR3O60755 368 aaPredicted RBP5.37□□□□□ -1.55
CPNE3-208ENST00000614678 MMP11P24347 488 aa5.37□□□□□ -1.55
CPNE3-208ENST00000614678 ARRB2P32121 409 aa5.37□□□□□ -1.55
CPNE3-208ENST00000614678 HTR6P50406 440 aa5.37□□□□□ -1.55
CPNE3-208ENST00000614678 SSPNQ14714 243 aa5.37□□□□□ -1.55
CPNE3-208ENST00000614678 ABRAXAS2Q15018 415 aa5.37□□□□□ -1.55
CPNE3-208ENST00000614678 PDK4Q16654 411 aa5.37□□□□□ -1.55
CPNE3-208ENST00000614678 GLE1Q53GS7 698 aaKnown RBP5.37□□□□□ -1.55
CPNE3-208ENST00000614678 TCTE1Q5JU00 501 aa5.37□□□□□ -1.55
CPNE3-208ENST00000614678 LETMD1Q6P1Q0 360 aa5.37□□□□□ -1.55
CPNE3-208ENST00000614678 ADGRD1Q6QNK2 874 aa5.37□□□□□ -1.55
CPNE3-208ENST00000614678 TMIGD1Q6UXZ0 262 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms