RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 CEP97Q8IW35 865 aa16.76■□□□□ 0.27
SMN2-213ENST00000614240 EID3Q8N140 333 aa16.76■□□□□ 0.27
SMN2-213ENST00000614240 AGGF1Q8N302 714 aaeCLIP16.76■□□□□ 0.27
SMN2-213ENST00000614240 KIF2BQ8N4N8 673 aa16.76■□□□□ 0.27
SMN2-213ENST00000614240 C2CD4AQ8NCU7 369 aaPredicted RBP16.76■□□□□ 0.27
SMN2-213ENST00000614240 AGAP11Q8TF27 550 aa16.76■□□□□ 0.27
SMN2-213ENST00000614240 TMEM125Q96AQ2 219 aa16.76■□□□□ 0.27
SMN2-213ENST00000614240 TRBC2A0A5B9 178 aa16.75■□□□□ 0.27
SMN2-213ENST00000614240 ZNHIT1O43257 154 aa16.75■□□□□ 0.27
SMN2-213ENST00000614240 PRMT3O60678 531 aa16.75■□□□□ 0.27
SMN2-213ENST00000614240 ZNF888P0CJ79 500 aaPredicted RBP16.75■□□□□ 0.27
SMN2-213ENST00000614240 PGAM1P18669 254 aa16.75■□□□□ 0.27
SMN2-213ENST00000614240 TPP2P29144 1249 aaPredicted RBP16.75■□□□□ 0.27
SMN2-213ENST00000614240 MAGEA3P43357 314 aa16.75■□□□□ 0.27
SMN2-213ENST00000614240 CDKN2DP55273 166 aa16.75■□□□□ 0.27
SMN2-213ENST00000614240 IL2P60568 153 aa16.75■□□□□ 0.27
SMN2-213ENST00000614240 HSF1Q00613 529 aa16.75■□□□□ 0.27
SMN2-213ENST00000614240 CSHL1Q14406 222 aa16.75■□□□□ 0.27
SMN2-213ENST00000614240 C3P1Q6ZMU1 363 aa16.75■□□□□ 0.27
SMN2-213ENST00000614240 NCCRP1Q6ZVX7 275 aaPredicted RBP16.75■□□□□ 0.27
SMN2-213ENST00000614240 SIAH3Q8IW03 269 aa16.75■□□□□ 0.27
SMN2-213ENST00000614240 PPIL6Q8IXY8 311 aa16.75■□□□□ 0.27
SMN2-213ENST00000614240 ZNF295-AS1Q8N0V1 137 aa16.75■□□□□ 0.27
SMN2-213ENST00000614240 AFAP1L2Q8N4X5 818 aa16.75■□□□□ 0.27
SMN2-213ENST00000614240 ABHD11Q8NFV4 315 aa16.75■□□□□ 0.27
SMN2-213ENST00000614240 ELP5Q8TE02 316 aa16.75■□□□□ 0.27
SMN2-213ENST00000614240 ATL1Q8WXF7 558 aa16.75■□□□□ 0.27
SMN2-213ENST00000614240 MS4A14Q96JA4 679 aa16.75■□□□□ 0.27
SMN2-213ENST00000614240 NAP1L3Q99457 506 aaPredicted RBP16.75■□□□□ 0.27
SMN2-213ENST00000614240 PKDREJQ9NTG1 2253 aa16.75■□□□□ 0.27
SMN2-213ENST00000614240 PSMD12O00232 456 aaPredicted RBP16.74■□□□□ 0.27
SMN2-213ENST00000614240 CDK2AP1O14519 115 aa16.74■□□□□ 0.27
SMN2-213ENST00000614240 FCHO1O14526 889 aa16.74■□□□□ 0.27
SMN2-213ENST00000614240 NME2P1O60361 137 aa16.74■□□□□ 0.27
SMN2-213ENST00000614240 DNAJB6O75190 326 aa16.74■□□□□ 0.27
SMN2-213ENST00000614240 GUCA1CO95843 209 aa16.74■□□□□ 0.27
SMN2-213ENST00000614240 B3GALT4O96024 378 aa16.74■□□□□ 0.27
SMN2-213ENST00000614240 NME2P22392 152 aa16.74■□□□□ 0.27
SMN2-213ENST00000614240 HNF4AP41235 474 aa16.74■□□□□ 0.27
SMN2-213ENST00000614240 KIR3DL1P43629 444 aa16.74■□□□□ 0.27
SMN2-213ENST00000614240 AP1S2P56377 157 aa16.74■□□□□ 0.27
SMN2-213ENST00000614240 RIPPLY3P57055 190 aa16.74■□□□□ 0.27
SMN2-213ENST00000614240 TIAL1Q01085 375 aaKnown RBP eCLIP16.74■□□□□ 0.27
SMN2-213ENST00000614240 PDAP1Q13442 181 aaKnown RBP16.74■□□□□ 0.27
SMN2-213ENST00000614240 CRYMQ14894 314 aa16.74■□□□□ 0.27
SMN2-213ENST00000614240 CDSNQ15517 529 aa16.74■□□□□ 0.27
SMN2-213ENST00000614240 RBM20Q5T481 1227 aaKnown RBP16.74■□□□□ 0.27
SMN2-213ENST00000614240 ZNF468Q5VIY5 522 aaPredicted RBP16.74■□□□□ 0.27
SMN2-213ENST00000614240 CPSF7Q8N684 471 aaKnown RBP16.74■□□□□ 0.27
SMN2-213ENST00000614240 NAT8LQ8N9F0 302 aa16.74■□□□□ 0.27
SMN2-213ENST00000614240 ARMC2Q8NEN0 867 aa16.74■□□□□ 0.27
SMN2-213ENST00000614240 OR4K1Q8NGD4 311 aa16.74■□□□□ 0.27
SMN2-213ENST00000614240 GRK7Q8WTQ7 553 aa16.74■□□□□ 0.27
SMN2-213ENST00000614240 CA5BP1Q8WTZ4 195 aa16.74■□□□□ 0.27
SMN2-213ENST00000614240 CHTF18Q8WVB6 975 aa16.74■□□□□ 0.27
SMN2-213ENST00000614240 PBKQ96KB5 322 aa16.74■□□□□ 0.27
SMN2-213ENST00000614240 OLFM1Q99784 485 aa16.74■□□□□ 0.27
SMN2-213ENST00000614240 TRIM51Q9BSJ1 452 aa16.74■□□□□ 0.27
SMN2-213ENST00000614240 DEFB126Q9BYW3 111 aa16.74■□□□□ 0.27
SMN2-213ENST00000614240 RHBGQ9H310 441 aa16.74■□□□□ 0.27
SMN2-213ENST00000614240 PPT2Q9UMR5 302 aa16.74■□□□□ 0.27
SMN2-213ENST00000614240 URADA6NGE7 173 aa16.73■□□□□ 0.27
SMN2-213ENST00000614240 A8MUA0 341 aa16.73■□□□□ 0.27
SMN2-213ENST00000614240 E9PLN8 166 aa16.73■□□□□ 0.27
SMN2-213ENST00000614240 ITGA8P53708 1063 aa16.73■□□□□ 0.27
SMN2-213ENST00000614240 MLF1P58340 268 aa16.73■□□□□ 0.27
SMN2-213ENST00000614240 RAB8AP61006 207 aa16.73■□□□□ 0.27
SMN2-213ENST00000614240 BTG2P78543 158 aa16.73■□□□□ 0.27
SMN2-213ENST00000614240 PPP1R7Q15435 360 aa16.73■□□□□ 0.27
SMN2-213ENST00000614240 CATSPEREQ5SY80 951 aa16.73■□□□□ 0.27
SMN2-213ENST00000614240 DOLPP1Q86YN1 238 aa16.73■□□□□ 0.27
SMN2-213ENST00000614240 GPATCH11Q8N954 259 aa16.73■□□□□ 0.27
SMN2-213ENST00000614240 OR56A3Q8NH54 315 aa16.73■□□□□ 0.27
SMN2-213ENST00000614240 NT5CQ8TCD5 201 aa16.73■□□□□ 0.27
SMN2-213ENST00000614240 SDCCAG3Q96C92 435 aa16.73■□□□□ 0.27
SMN2-213ENST00000614240 VKORC1Q9BQB6 163 aa16.73■□□□□ 0.27
SMN2-213ENST00000614240 SARGQ9BW04 601 aa16.73■□□□□ 0.27
SMN2-213ENST00000614240 PPANQ9NQ55 473 aaKnown RBP16.73■□□□□ 0.27
SMN2-213ENST00000614240 COQ3Q9NZJ6 369 aa16.73■□□□□ 0.27
SMN2-213ENST00000614240 ZFP69BQ9UJL9 534 aa16.73■□□□□ 0.27
SMN2-213ENST00000614240 NEU2Q9Y3R4 380 aa16.73■□□□□ 0.27
SMN2-213ENST00000614240 DYRK1BQ9Y463 629 aa16.73■□□□□ 0.27
SMN2-213ENST00000614240 PCNX1Q96RV3 2341 aa16.73■□□□□ 0.27
SMN2-213ENST00000614240 SAGE2PA6NJ88 616 aa16.72■□□□□ 0.27
SMN2-213ENST00000614240 KLRC4-KLRK1H3BQV0 150 aa16.72■□□□□ 0.27
SMN2-213ENST00000614240 TFECO14948 347 aaPredicted RBP16.72■□□□□ 0.27
SMN2-213ENST00000614240 TTC4O95801 387 aa16.72■□□□□ 0.27
SMN2-213ENST00000614240 AHSGP02765 367 aa16.72■□□□□ 0.27
SMN2-213ENST00000614240 RNH1P13489 461 aaKnown RBP16.72■□□□□ 0.27
SMN2-213ENST00000614240 MAOAP21397 527 aa16.72■□□□□ 0.27
SMN2-213ENST00000614240 AHRP35869 848 aa16.72■□□□□ 0.27
SMN2-213ENST00000614240 HLCSP50747 726 aa16.72■□□□□ 0.27
SMN2-213ENST00000614240 RNFT1Q5M7Z0 435 aa16.72■□□□□ 0.27
SMN2-213ENST00000614240 SPANXN3Q5MJ09 141 aa16.72■□□□□ 0.27
SMN2-213ENST00000614240 QSOX2Q6ZRP7 698 aa16.72■□□□□ 0.27
SMN2-213ENST00000614240 STRA8Q7Z7C7 330 aa16.72■□□□□ 0.27
SMN2-213ENST00000614240 RASGEF1CQ8N431 466 aa16.72■□□□□ 0.27
SMN2-213ENST00000614240 UTP15Q8TED0 518 aaKnown RBP16.72■□□□□ 0.27
SMN2-213ENST00000614240 PHF10Q8WUB8 498 aaKnown RBP16.72■□□□□ 0.27
SMN2-213ENST00000614240 SLC5A11Q8WWX8 675 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms