RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 LOC110117498-PIK3R3F6TDL0 507 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 DLX3O60479 287 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 CLDN9O95484 217 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 CST1P01037 141 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 CTSCP53634 463 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 MAPK12P53778 367 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 LYPLAL1Q5VWZ2 237 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 HMBOX1Q6NT76 420 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 AGTRAPQ6RW13 159 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 C12orf40Q86WS4 652 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 LILRA3Q8N6C8 439 aaPredicted RBP10.47□□□□□ -0.73
FAM3A-221ENST00000612856 UTP15Q8TED0 518 aaKnown RBP10.47□□□□□ -0.73
FAM3A-221ENST00000612856 TSGA13Q96PP4 275 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 COPS4Q9BT78 406 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 MROQ9BYG7 248 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 OXSMQ9NWU1 459 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 COMMD8Q9NX08 183 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 FTSJ1Q9UET6 329 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 SNTNA6NMZ2 147 aa10.46□□□□□ -0.73
FAM3A-221ENST00000612856 MAN2B1O00754 1011 aa10.46□□□□□ -0.73
FAM3A-221ENST00000612856 RFXANKO14593 260 aa10.46□□□□□ -0.73
FAM3A-221ENST00000612856 ACOT8O14734 319 aa10.46□□□□□ -0.73
FAM3A-221ENST00000612856 ARPC2O15144 300 aa10.46□□□□□ -0.73
FAM3A-221ENST00000612856 TPST2O60704 377 aa10.46□□□□□ -0.73
FAM3A-221ENST00000612856 NR2F1P10589 423 aa10.46□□□□□ -0.73
FAM3A-221ENST00000612856 MYF6P23409 242 aa10.46□□□□□ -0.73
FAM3A-221ENST00000612856 DCKP27707 260 aa10.46□□□□□ -0.73
FAM3A-221ENST00000612856 HTR2BP41595 481 aa10.46□□□□□ -0.73
FAM3A-221ENST00000612856 SPINT3P49223 89 aa10.46□□□□□ -0.73
FAM3A-221ENST00000612856 CCT3P49368 545 aaKnown RBP10.46□□□□□ -0.73
FAM3A-221ENST00000612856 OC90Q02509 493 aaPredicted RBP10.46□□□□□ -0.73
FAM3A-221ENST00000612856 LIPEQ05469 1076 aa10.46□□□□□ -0.73
FAM3A-221ENST00000612856 DUSP6Q16828 381 aa10.46□□□□□ -0.73
FAM3A-221ENST00000612856 GPR33Q49SQ1 333 aa10.46□□□□□ -0.73
FAM3A-221ENST00000612856 FAM98BQ52LJ0 330 aaKnown RBP10.46□□□□□ -0.73
FAM3A-221ENST00000612856 C1orf189Q5VU69 101 aa10.46□□□□□ -0.73
FAM3A-221ENST00000612856 DENND5AQ6IQ26 1287 aa10.46□□□□□ -0.73
FAM3A-221ENST00000612856 SYCE2Q6PIF2 218 aa10.46□□□□□ -0.73
FAM3A-221ENST00000612856 RNF44Q7L0R7 432 aa10.46□□□□□ -0.73
FAM3A-221ENST00000612856 ATG16L2Q8NAA4 619 aa10.46□□□□□ -0.73
FAM3A-221ENST00000612856 MDGA1Q8NFP4 955 aa10.46□□□□□ -0.73
FAM3A-221ENST00000612856 OR2A12Q8NGT7 310 aa10.46□□□□□ -0.73
FAM3A-221ENST00000612856 MTERF3Q96E29 417 aa10.46□□□□□ -0.73
FAM3A-221ENST00000612856 PCDHB3Q9Y5E6 796 aa10.46□□□□□ -0.73
FAM3A-221ENST00000612856 FEZF1A0PJY2 475 aa10.46□□□□□ -0.73
FAM3A-221ENST00000612856 OR6C74A6NCV1 312 aa10.46□□□□□ -0.73
FAM3A-221ENST00000612856 FAM25AB3EWG3 89 aa10.46□□□□□ -0.73
FAM3A-221ENST00000612856 FAM25CB3EWG5 89 aa10.46□□□□□ -0.73
FAM3A-221ENST00000612856 FAM25GB3EWG6 89 aa10.46□□□□□ -0.73
FAM3A-221ENST00000612856 SCN2BO60939 215 aa10.46□□□□□ -0.73
FAM3A-221ENST00000612856 ABCB7O75027 752 aa10.46□□□□□ -0.73
FAM3A-221ENST00000612856 AGXTP21549 392 aa10.46□□□□□ -0.73
FAM3A-221ENST00000612856 HLCSP50747 726 aa10.46□□□□□ -0.73
FAM3A-221ENST00000612856 RPS7P62081 194 aaKnown RBP10.46□□□□□ -0.73
FAM3A-221ENST00000612856 SLC7A9P82251 487 aa10.46□□□□□ -0.73
FAM3A-221ENST00000612856 CCDC28AQ8IWP9 274 aa10.46□□□□□ -0.73
FAM3A-221ENST00000612856 PHF21AQ96BD5 680 aa10.46□□□□□ -0.73
FAM3A-221ENST00000612856 SCRN2Q96FV2 425 aa10.46□□□□□ -0.73
FAM3A-221ENST00000612856 SLC39A13Q96H72 371 aa10.46□□□□□ -0.73
FAM3A-221ENST00000612856 CDCA3Q99618 268 aaPredicted RBP10.46□□□□□ -0.73
FAM3A-221ENST00000612856 CDX2Q99626 313 aaPredicted RBP10.46□□□□□ -0.73
FAM3A-221ENST00000612856 CCM2Q9BSQ5 444 aa10.46□□□□□ -0.73
FAM3A-221ENST00000612856 LRTM1Q9HBL6 345 aa10.46□□□□□ -0.73
FAM3A-221ENST00000612856 MOCS1Q9NZB8 636 aa10.46□□□□□ -0.73
FAM3A-221ENST00000612856 IL37Q9NZH6 218 aa10.46□□□□□ -0.73
FAM3A-221ENST00000612856 MAT2BQ9NZL9 334 aa10.46□□□□□ -0.73
FAM3A-221ENST00000612856 DOPEY2Q9Y3R5 2298 aa10.46□□□□□ -0.74
FAM3A-221ENST00000612856 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.46□□□□□ -0.74
FAM3A-221ENST00000612856 SOBPA7XYQ1 873 aa10.46□□□□□ -0.74
FAM3A-221ENST00000612856 G3V2T6 193 aa10.46□□□□□ -0.74
FAM3A-221ENST00000612856 NUAK1O60285 661 aa10.46□□□□□ -0.74
FAM3A-221ENST00000612856 ANGPTL1O95841 491 aa10.46□□□□□ -0.74
FAM3A-221ENST00000612856 SLC35G6P0C7Q6 338 aa10.46□□□□□ -0.74
FAM3A-221ENST00000612856 MYF5P13349 255 aa10.46□□□□□ -0.74
FAM3A-221ENST00000612856 DGKQP52824 942 aa10.46□□□□□ -0.74
FAM3A-221ENST00000612856 MLLT10P55197 1068 aa10.46□□□□□ -0.74
FAM3A-221ENST00000612856 CDKN2DP55273 166 aa10.46□□□□□ -0.74
FAM3A-221ENST00000612856 FCHO2Q0JRZ9 810 aa10.46□□□□□ -0.74
FAM3A-221ENST00000612856 AHSA2Q719I0 299 aa10.46□□□□□ -0.74
FAM3A-221ENST00000612856 SLC43A3Q8NBI5 491 aa10.46□□□□□ -0.74
FAM3A-221ENST00000612856 GALNT6Q8NCL4 622 aa10.46□□□□□ -0.74
FAM3A-221ENST00000612856 RBM18Q96H35 190 aaKnown RBP10.46□□□□□ -0.74
FAM3A-221ENST00000612856 CCDC120Q96HB5 630 aa10.46□□□□□ -0.74
FAM3A-221ENST00000612856 KCNS3Q9BQ31 491 aa10.46□□□□□ -0.74
FAM3A-221ENST00000612856 TBC1D17Q9HA65 648 aa10.46□□□□□ -0.74
FAM3A-221ENST00000612856 INTS6Q9UL03 887 aaKnown RBP10.46□□□□□ -0.74
FAM3A-221ENST00000612856 HCN2Q9UL51 889 aa10.46□□□□□ -0.74
FAM3A-221ENST00000612856 ZNF99A8MXY4 864 aaPredicted RBP10.45□□□□□ -0.74
FAM3A-221ENST00000612856 EPN2O95208 641 aa10.45□□□□□ -0.74
FAM3A-221ENST00000612856 CMPK1P30085 196 aa10.45□□□□□ -0.74
FAM3A-221ENST00000612856 PPP2R1BP30154 601 aa10.45□□□□□ -0.74
FAM3A-221ENST00000612856 NTSP30990 170 aa10.45□□□□□ -0.74
FAM3A-221ENST00000612856 BUD31P41223 144 aaPredicted RBP10.45□□□□□ -0.74
FAM3A-221ENST00000612856 MRPL28Q13084 256 aaKnown RBP10.45□□□□□ -0.74
FAM3A-221ENST00000612856 HKDC1Q2TB90 917 aa10.45□□□□□ -0.74
FAM3A-221ENST00000612856 KHDRBS2Q5VWX1 349 aaKnown RBP10.45□□□□□ -0.74
FAM3A-221ENST00000612856 TRIM40Q6P9F5 258 aa10.45□□□□□ -0.74
FAM3A-221ENST00000612856 RANBP10Q6VN20 620 aa10.45□□□□□ -0.74
FAM3A-221ENST00000612856 HS3ST5Q8IZT8 346 aa10.45□□□□□ -0.74
FAM3A-221ENST00000612856 TRPV3Q8NET8 790 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms