RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 AP2B1P63010 937 aa8.52□□□□□ -1.04
CCDC47-207ENST00000612558 PHC1P78364 1004 aa8.52□□□□□ -1.04
CCDC47-207ENST00000612558 MS4A2Q01362 244 aa8.52□□□□□ -1.04
CCDC47-207ENST00000612558 SIGLEC14Q08ET2 396 aa8.52□□□□□ -1.04
CCDC47-207ENST00000612558 ZNF763Q0D2J5 394 aa8.52□□□□□ -1.04
CCDC47-207ENST00000612558 C1orf61Q13536 156 aa8.52□□□□□ -1.04
CCDC47-207ENST00000612558 CCNIQ14094 377 aa8.52□□□□□ -1.04
CCDC47-207ENST00000612558 FLOT2Q14254 428 aa8.52□□□□□ -1.04
CCDC47-207ENST00000612558 ELOCQ15369 112 aa8.52□□□□□ -1.04
CCDC47-207ENST00000612558 PGS1Q32NB8 556 aa8.52□□□□□ -1.04
CCDC47-207ENST00000612558 WDR45BQ5MNZ6 344 aa8.52□□□□□ -1.04
CCDC47-207ENST00000612558 KIAA1614Q5VZ46 1190 aa8.52□□□□□ -1.04
CCDC47-207ENST00000612558 NANOGP8Q6NSW7 305 aa8.52□□□□□ -1.04
CCDC47-207ENST00000612558 TMEFF1Q8IYR6 380 aa8.52□□□□□ -1.04
CCDC47-207ENST00000612558 KIAA2013Q8IYS2 634 aa8.52□□□□□ -1.04
CCDC47-207ENST00000612558 NAGSQ8N159 534 aa8.52□□□□□ -1.04
CCDC47-207ENST00000612558 FBXL6Q8N531 539 aa8.52□□□□□ -1.04
CCDC47-207ENST00000612558 FAM46DQ8NEK8 389 aa8.52□□□□□ -1.04
CCDC47-207ENST00000612558 OR8J2Q8NGG1 315 aa8.52□□□□□ -1.04
CCDC47-207ENST00000612558 ZDHHC1Q8WTX9 485 aa8.52□□□□□ -1.04
CCDC47-207ENST00000612558 PATE1Q8WXA2 126 aa8.52□□□□□ -1.04
CCDC47-207ENST00000612558 GFM2Q969S9 779 aaKnown RBP8.52□□□□□ -1.04
CCDC47-207ENST00000612558 TMEM125Q96AQ2 219 aa8.52□□□□□ -1.04
CCDC47-207ENST00000612558 ITCHQ96J02 903 aa8.52□□□□□ -1.04
CCDC47-207ENST00000612558 PRPF18Q99633 342 aaKnown RBP8.52□□□□□ -1.04
CCDC47-207ENST00000612558 CGREF1Q99674 301 aa8.52□□□□□ -1.04
CCDC47-207ENST00000612558 CENPKQ9BS16 269 aa8.52□□□□□ -1.04
CCDC47-207ENST00000612558 MS4A8Q9BY19 250 aa8.52□□□□□ -1.04
CCDC47-207ENST00000612558 CAAP1Q9H8G2 361 aa8.52□□□□□ -1.04
CCDC47-207ENST00000612558 NANOGQ9H9S0 305 aa8.52□□□□□ -1.04
CCDC47-207ENST00000612558 SLC6A20Q9NP91 592 aa8.52□□□□□ -1.04
CCDC47-207ENST00000612558 CD320Q9NPF0 282 aa8.52□□□□□ -1.04
CCDC47-207ENST00000612558 CMTM6Q9NX76 183 aa8.52□□□□□ -1.04
CCDC47-207ENST00000612558 STX18Q9P2W9 335 aaKnown RBP8.52□□□□□ -1.04
CCDC47-207ENST00000612558 NKX1-2Q9UD57 310 aaPredicted RBP8.52□□□□□ -1.04
CCDC47-207ENST00000612558 MCM8Q9UJA3 840 aa8.52□□□□□ -1.04
CCDC47-207ENST00000612558 PCDHGA2Q9Y5H1 932 aa8.52□□□□□ -1.04
CCDC47-207ENST00000612558 ENTPD2Q9Y5L3 495 aa8.52□□□□□ -1.04
CCDC47-207ENST00000612558 NCOR1O75376 2440 aa8.52□□□□□ -1.05
CCDC47-207ENST00000612558 NUP214P35658 2090 aaPredicted RBP8.52□□□□□ -1.05
CCDC47-207ENST00000612558 COL6A3P12111 3177 aa8.52□□□□□ -1.05
CCDC47-207ENST00000612558 EML5Q05BV3 1969 aa8.52□□□□□ -1.05
CCDC47-207ENST00000612558 GABRR3A8MPY1 467 aa8.52□□□□□ -1.05
CCDC47-207ENST00000612558 SAP18O00422 153 aaKnown RBP8.52□□□□□ -1.05
CCDC47-207ENST00000612558 SCAMP2O15127 329 aaKnown RBP8.52□□□□□ -1.05
CCDC47-207ENST00000612558 VILLO15195 856 aa8.52□□□□□ -1.05
CCDC47-207ENST00000612558 AKAP10O43572 662 aa8.52□□□□□ -1.05
CCDC47-207ENST00000612558 ERN1O75460 977 aaKnown RBP8.52□□□□□ -1.05
CCDC47-207ENST00000612558 STAMBPO95630 424 aa8.52□□□□□ -1.05
CCDC47-207ENST00000612558 TBX6O95947 436 aaPredicted RBP8.52□□□□□ -1.05
CCDC47-207ENST00000612558 KLK1P06870 262 aa8.52□□□□□ -1.05
CCDC47-207ENST00000612558 HSD17B1P14061 328 aa8.52□□□□□ -1.05
CCDC47-207ENST00000612558 COX7A2P14406 83 aa8.52□□□□□ -1.05
CCDC47-207ENST00000612558 MSX2P35548 267 aaPredicted RBP8.52□□□□□ -1.05
CCDC47-207ENST00000612558 AHRP35869 848 aa8.52□□□□□ -1.05
CCDC47-207ENST00000612558 HPCAL1P37235 193 aa8.52□□□□□ -1.05
CCDC47-207ENST00000612558 RPL3P39023 403 aaKnown RBP8.52□□□□□ -1.05
CCDC47-207ENST00000612558 HNRNPFP52597 415 aaKnown RBP8.52□□□□□ -1.05
CCDC47-207ENST00000612558 EEFSECP57772 596 aaKnown RBP8.52□□□□□ -1.05
CCDC47-207ENST00000612558 NXPH1P58417 271 aa8.52□□□□□ -1.05
CCDC47-207ENST00000612558 CYP4F2P78329 520 aa8.52□□□□□ -1.05
CCDC47-207ENST00000612558 DMWDQ09019 674 aa8.52□□□□□ -1.05
CCDC47-207ENST00000612558 RCN1Q15293 331 aa8.52□□□□□ -1.05
CCDC47-207ENST00000612558 UGT8Q16880 541 aa8.52□□□□□ -1.05
CCDC47-207ENST00000612558 HKDC1Q2TB90 917 aa8.52□□□□□ -1.05
CCDC47-207ENST00000612558 TMEM35AQ53FP2 167 aa8.52□□□□□ -1.05
CCDC47-207ENST00000612558 C6orf10Q5SRN2 563 aa8.52□□□□□ -1.05
CCDC47-207ENST00000612558 XP32Q5T750 250 aa8.52□□□□□ -1.05
CCDC47-207ENST00000612558 CWF19L1Q69YN2 538 aaKnown RBP8.52□□□□□ -1.05
CCDC47-207ENST00000612558 ZNF425Q6IV72 752 aa8.52□□□□□ -1.05
CCDC47-207ENST00000612558 PAGE2Q7Z2X7 111 aa8.52□□□□□ -1.05
CCDC47-207ENST00000612558 R3HCC1LQ7Z5L2 792 aaKnown RBP8.52□□□□□ -1.05
CCDC47-207ENST00000612558 CAMKMTQ7Z624 323 aa8.52□□□□□ -1.05
CCDC47-207ENST00000612558 GKN2Q86XP6 184 aa8.52□□□□□ -1.05
CCDC47-207ENST00000612558 FAM20CQ8IXL6 584 aa8.52□□□□□ -1.05
CCDC47-207ENST00000612558 SDR16C5Q8N3Y7 309 aa8.52□□□□□ -1.05
CCDC47-207ENST00000612558 AVL9Q8NBF6 648 aa8.52□□□□□ -1.05
CCDC47-207ENST00000612558 TRPV3Q8NET8 790 aa8.52□□□□□ -1.05
CCDC47-207ENST00000612558 OR8J3Q8NGG0 315 aa8.52□□□□□ -1.05
CCDC47-207ENST00000612558 WDR48Q8TAF3 677 aa8.52□□□□□ -1.05
CCDC47-207ENST00000612558 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.52□□□□□ -1.05
CCDC47-207ENST00000612558 SLC26A7Q8TE54 656 aa8.52□□□□□ -1.05
CCDC47-207ENST00000612558 SLC37A2Q8TED4 501 aa8.52□□□□□ -1.05
CCDC47-207ENST00000612558 CREB3L4Q8TEY5 395 aa8.52□□□□□ -1.05
CCDC47-207ENST00000612558 GTPBP3Q969Y2 492 aaKnown RBP8.52□□□□□ -1.05
CCDC47-207ENST00000612558 RGMAQ96B86 450 aa8.52□□□□□ -1.05
CCDC47-207ENST00000612558 PPM1MQ96MI6 270 aa8.52□□□□□ -1.05
CCDC47-207ENST00000612558 QRFPRQ96P65 431 aa8.52□□□□□ -1.05
CCDC47-207ENST00000612558 OR2A14Q96R47 310 aa8.52□□□□□ -1.05
CCDC47-207ENST00000612558 F2RL3Q96RI0 385 aa8.52□□□□□ -1.05
CCDC47-207ENST00000612558 SH3GL1Q99961 368 aa8.52□□□□□ -1.05
CCDC47-207ENST00000612558 KCNH6Q9H252 994 aa8.52□□□□□ -1.05
CCDC47-207ENST00000612558 S100A14Q9HCY8 104 aa8.52□□□□□ -1.05
CCDC47-207ENST00000612558 SPASTQ9UBP0 616 aa8.52□□□□□ -1.05
CCDC47-207ENST00000612558 MAN2B2Q9Y2E5 1009 aa8.52□□□□□ -1.05
CCDC47-207ENST00000612558 WBP11Q9Y2W2 641 aaKnown RBP8.52□□□□□ -1.05
CCDC47-207ENST00000612558 AP1M2Q9Y6Q5 423 aa8.52□□□□□ -1.05
CCDC47-207ENST00000612558 MDC1Q14676 2089 aaKnown RBP8.52□□□□□ -1.05
CCDC47-207ENST00000612558 A0A096LPI6 279 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 OR6C74A6NCV1 312 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms