RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 OR4D1Q15615 310 aa11.67□□□□□ -0.54
CBWD3-208ENST00000612050 SYT16Q17RD7 645 aa11.67□□□□□ -0.54
CBWD3-208ENST00000612050 TSNAXIP1Q2TAA8 658 aa11.67□□□□□ -0.54
CBWD3-208ENST00000612050 DEFB134Q4QY38 66 aa11.67□□□□□ -0.54
CBWD3-208ENST00000612050 TOR1AIP1Q5JTV8 583 aa11.67□□□□□ -0.54
CBWD3-208ENST00000612050 JMJD6Q6NYC1 403 aaPredicted RBP11.67□□□□□ -0.54
CBWD3-208ENST00000612050 ISLR2Q6UXK2 745 aa11.67□□□□□ -0.54
CBWD3-208ENST00000612050 RIPOR1Q6ZS17 1223 aa11.67□□□□□ -0.54
CBWD3-208ENST00000612050 TRMT10CQ7L0Y3 403 aaKnown RBP11.67□□□□□ -0.54
CBWD3-208ENST00000612050 ZC3H7AQ8IWR0 971 aaKnown RBP11.67□□□□□ -0.54
CBWD3-208ENST00000612050 IQCKQ8N0W5 287 aa11.67□□□□□ -0.54
CBWD3-208ENST00000612050 ZNF740Q8NDX6 193 aa11.67□□□□□ -0.54
CBWD3-208ENST00000612050 SRFBP1Q8NEF9 429 aaKnown RBP11.67□□□□□ -0.54
CBWD3-208ENST00000612050 ADAMTS18Q8TE60 1221 aa11.67□□□□□ -0.54
CBWD3-208ENST00000612050 CCDC77Q9BR77 488 aa11.67□□□□□ -0.54
CBWD3-208ENST00000612050 CD244Q9BZW8 370 aa11.67□□□□□ -0.54
CBWD3-208ENST00000612050 NT5DC2Q9H857 520 aa11.67□□□□□ -0.54
CBWD3-208ENST00000612050 ABI3Q9P2A4 366 aa11.67□□□□□ -0.54
CBWD3-208ENST00000612050 MRPS33Q9Y291 106 aaKnown RBP11.67□□□□□ -0.54
CBWD3-208ENST00000612050 B3GNT3Q9Y2A9 372 aa11.67□□□□□ -0.54
CBWD3-208ENST00000612050 TNPO3Q9Y5L0 923 aaKnown RBP11.67□□□□□ -0.54
CBWD3-208ENST00000612050 PIEZO2Q9H5I5 2752 aa11.67□□□□□ -0.54
CBWD3-208ENST00000612050 TNRC6AQ8NDV7 1962 aaKnown RBP11.66□□□□□ -0.54
CBWD3-208ENST00000612050 IGHV1-45A0A0A0MS14 117 aa11.66□□□□□ -0.54
CBWD3-208ENST00000612050 SYNDIG1LA6NDD5 238 aa11.66□□□□□ -0.54
CBWD3-208ENST00000612050 K7EM74 188 aa11.66□□□□□ -0.54
CBWD3-208ENST00000612050 K7EPI3 171 aa11.66□□□□□ -0.54
CBWD3-208ENST00000612050 GALR3O60755 368 aaPredicted RBP11.66□□□□□ -0.54
CBWD3-208ENST00000612050 KLHL2O95198 593 aa11.66□□□□□ -0.54
CBWD3-208ENST00000612050 RBP1P09455 135 aa11.66□□□□□ -0.54
CBWD3-208ENST00000612050 RHOXF2BP0C7M4 288 aa11.66□□□□□ -0.54
CBWD3-208ENST00000612050 ARL1P40616 181 aaPredicted RBP11.66□□□□□ -0.54
CBWD3-208ENST00000612050 HNF4AP41235 474 aa11.66□□□□□ -0.54
CBWD3-208ENST00000612050 CRB2Q5IJ48 1285 aa11.66□□□□□ -0.54
CBWD3-208ENST00000612050 SLCO4C1Q6ZQN7 724 aa11.66□□□□□ -0.54
CBWD3-208ENST00000612050 CPEB2Q7Z5Q1 589 aaKnown RBP11.66□□□□□ -0.54
CBWD3-208ENST00000612050 ISCA2Q86U28 154 aa11.66□□□□□ -0.54
CBWD3-208ENST00000612050 LAPTM4BQ86VI4 370 aa11.66□□□□□ -0.54
CBWD3-208ENST00000612050 ARHGEF39Q8N4T4 335 aa11.66□□□□□ -0.54
CBWD3-208ENST00000612050 SUN3Q8TAQ9 357 aa11.66□□□□□ -0.54
CBWD3-208ENST00000612050 CPT1CQ8TCG5 803 aa11.66□□□□□ -0.54
CBWD3-208ENST00000612050 KCTD4Q8WVF5 259 aa11.66□□□□□ -0.54
CBWD3-208ENST00000612050 SLC44A1Q8WWI5 657 aa11.66□□□□□ -0.54
CBWD3-208ENST00000612050 GAL3ST3Q96A11 431 aa11.66□□□□□ -0.54
CBWD3-208ENST00000612050 TBC1D20Q96BZ9 403 aa11.66□□□□□ -0.54
CBWD3-208ENST00000612050 C8orf44Q96CB5 159 aa11.66□□□□□ -0.54
CBWD3-208ENST00000612050 NXNL1Q96CM4 212 aa11.66□□□□□ -0.54
CBWD3-208ENST00000612050 REPS1Q96D71 796 aa11.66□□□□□ -0.54
CBWD3-208ENST00000612050 PEX11GQ96HA9 241 aa11.66□□□□□ -0.54
CBWD3-208ENST00000612050 SCYL1Q96KG9 808 aa11.66□□□□□ -0.54
CBWD3-208ENST00000612050 PAFAH2Q99487 392 aa11.66□□□□□ -0.54
CBWD3-208ENST00000612050 LPAR4Q99677 370 aa11.66□□□□□ -0.54
CBWD3-208ENST00000612050 RHOXF2Q9BQY4 288 aa11.66□□□□□ -0.54
CBWD3-208ENST00000612050 ROGDIQ9GZN7 287 aa11.66□□□□□ -0.54
CBWD3-208ENST00000612050 ZNF552Q9H707 407 aaPredicted RBP11.66□□□□□ -0.54
CBWD3-208ENST00000612050 ADGRE2Q9UHX3 823 aa11.66□□□□□ -0.54
CBWD3-208ENST00000612050 PTBP2Q9UKA9 531 aaKnown RBP11.66□□□□□ -0.54
CBWD3-208ENST00000612050 NFU1Q9UMS0 254 aa11.66□□□□□ -0.54
CBWD3-208ENST00000612050 MRPS2Q9Y399 296 aaKnown RBP11.66□□□□□ -0.54
CBWD3-208ENST00000612050 SPACA6W5XKT8 324 aa11.66□□□□□ -0.54
CBWD3-208ENST00000612050 ZNF860A6NHJ4 632 aa11.65□□□□□ -0.54
CBWD3-208ENST00000612050 UBXN8O00124 270 aa11.65□□□□□ -0.54
CBWD3-208ENST00000612050 CLDN4O14493 209 aa11.65□□□□□ -0.54
CBWD3-208ENST00000612050 B3GALT2O43825 422 aa11.65□□□□□ -0.54
CBWD3-208ENST00000612050 SMIM24O75264 130 aa11.65□□□□□ -0.54
CBWD3-208ENST00000612050 CLEC3AO75596 197 aa11.65□□□□□ -0.54
CBWD3-208ENST00000612050 C1QAP02745 245 aa11.65□□□□□ -0.54
CBWD3-208ENST00000612050 PDGFAP04085 211 aa11.65□□□□□ -0.54
CBWD3-208ENST00000612050 SERPINA7P05543 415 aa11.65□□□□□ -0.54
CBWD3-208ENST00000612050 FHP07954 510 aa11.65□□□□□ -0.54
CBWD3-208ENST00000612050 COX6A1P12074 109 aa11.65□□□□□ -0.54
CBWD3-208ENST00000612050 COL6A2P12110 1019 aa11.65□□□□□ -0.54
CBWD3-208ENST00000612050 RNH1P13489 461 aaKnown RBP11.65□□□□□ -0.54
CBWD3-208ENST00000612050 GLRBP48167 497 aa11.65□□□□□ -0.54
CBWD3-208ENST00000612050 TAS2R50P59544 299 aa11.65□□□□□ -0.54
CBWD3-208ENST00000612050 RAB8AP61006 207 aa11.65□□□□□ -0.54
CBWD3-208ENST00000612050 CHIT1Q13231 466 aa11.65□□□□□ -0.54
CBWD3-208ENST00000612050 NSDHLQ15738 373 aa11.65□□□□□ -0.54
CBWD3-208ENST00000612050 EXT1Q16394 746 aa11.65□□□□□ -0.54
CBWD3-208ENST00000612050 ZXDCQ2QGD7 858 aaPredicted RBP11.65□□□□□ -0.54
CBWD3-208ENST00000612050 NADK2Q4G0N4 442 aa11.65□□□□□ -0.54
CBWD3-208ENST00000612050 IGFL3Q6UXB1 125 aa11.65□□□□□ -0.54
CBWD3-208ENST00000612050 PRSS41Q7RTY9 318 aa11.65□□□□□ -0.54
CBWD3-208ENST00000612050 MYLK4Q86YV6 388 aaPredicted RBP11.65□□□□□ -0.54
CBWD3-208ENST00000612050 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.65□□□□□ -0.54
CBWD3-208ENST00000612050 C7orf57Q8NEG2 295 aa11.65□□□□□ -0.54
CBWD3-208ENST00000612050 UTP15Q8TED0 518 aaKnown RBP11.65□□□□□ -0.54
CBWD3-208ENST00000612050 PPP4R1Q8TF05 950 aa11.65□□□□□ -0.54
CBWD3-208ENST00000612050 MTBPQ96DY7 904 aa11.65□□□□□ -0.54
CBWD3-208ENST00000612050 LMF1Q96S06 567 aa11.65□□□□□ -0.54
CBWD3-208ENST00000612050 WDR77Q9BQA1 342 aaPredicted RBP11.65□□□□□ -0.54
CBWD3-208ENST00000612050 TMEM79Q9BSE2 394 aa11.65□□□□□ -0.54
CBWD3-208ENST00000612050 NPLQ9BXD5 320 aaPredicted RBP11.65□□□□□ -0.54
CBWD3-208ENST00000612050 FUT8Q9BYC5 575 aa11.65□□□□□ -0.54
CBWD3-208ENST00000612050 SLC6A16Q9GZN6 736 aa11.65□□□□□ -0.54
CBWD3-208ENST00000612050 VN1R1Q9GZP7 353 aa11.65□□□□□ -0.54
CBWD3-208ENST00000612050 ZNF700Q9H0M5 742 aa11.65□□□□□ -0.54
CBWD3-208ENST00000612050 SYNPO2LQ9H987 977 aa11.65□□□□□ -0.54
CBWD3-208ENST00000612050 CPSF2Q9P2I0 782 aaKnown RBP11.65□□□□□ -0.54
CBWD3-208ENST00000612050 ZNF180Q9UJW8 692 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms