RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 PCDHGB3Q9Y5G1 929 aa19.64■□□□□ 0.73
SSBP3-216ENST00000610401 ITGA1P56199 1179 aa19.63■□□□□ 0.73
SSBP3-216ENST00000610401 MRPL58Q14197 206 aaKnown RBP19.63■□□□□ 0.73
SSBP3-216ENST00000610401 WDR53Q7Z5U6 358 aaPredicted RBP19.63■□□□□ 0.73
SSBP3-216ENST00000610401 RNF130Q86XS8 419 aa19.63■□□□□ 0.73
SSBP3-216ENST00000610401 CHST14Q8NCH0 376 aa19.63■□□□□ 0.73
SSBP3-216ENST00000610401 UBASH3BQ8TF42 649 aa19.63■□□□□ 0.73
SSBP3-216ENST00000610401 FAM129BQ96TA1 746 aa19.63■□□□□ 0.73
SSBP3-216ENST00000610401 MGLLQ99685 303 aa19.63■□□□□ 0.73
SSBP3-216ENST00000610401 HOXD1Q9GZZ0 328 aa19.63■□□□□ 0.73
SSBP3-216ENST00000610401 ABCB8Q9NUT2 735 aa19.63■□□□□ 0.73
SSBP3-216ENST00000610401 TBC1D14Q9P2M4 693 aa19.63■□□□□ 0.73
SSBP3-216ENST00000610401 MAN2B2Q9Y2E5 1009 aa19.63■□□□□ 0.73
SSBP3-216ENST00000610401 CHD7Q9P2D1 2997 aa19.63■□□□□ 0.73
SSBP3-216ENST00000610401 PRAMEF25A6NGN4 478 aa19.63■□□□□ 0.73
SSBP3-216ENST00000610401 ZW10O43264 779 aa19.63■□□□□ 0.73
SSBP3-216ENST00000610401 NUAK1O60285 661 aa19.63■□□□□ 0.73
SSBP3-216ENST00000610401 SCN2BO60939 215 aa19.63■□□□□ 0.73
SSBP3-216ENST00000610401 CDK1P06493 297 aa19.63■□□□□ 0.73
SSBP3-216ENST00000610401 OR56A5P0C7T3 313 aa19.63■□□□□ 0.73
SSBP3-216ENST00000610401 MAPK1P28482 360 aa19.63■□□□□ 0.73
SSBP3-216ENST00000610401 IRF3Q14653 427 aa19.63■□□□□ 0.73
SSBP3-216ENST00000610401 RETSATQ6NUM9 610 aa19.63■□□□□ 0.73
SSBP3-216ENST00000610401 Q6ZVU0 165 aa19.63■□□□□ 0.73
SSBP3-216ENST00000610401 GPR151Q8TDV0 419 aa19.63■□□□□ 0.73
SSBP3-216ENST00000610401 SOCS4Q8WXH5 440 aa19.63■□□□□ 0.73
SSBP3-216ENST00000610401 HRASLS5Q96KN8 279 aa19.63■□□□□ 0.73
SSBP3-216ENST00000610401 GCM2O75603 506 aaPredicted RBP19.63■□□□□ 0.73
SSBP3-216ENST00000610401 LMAN2Q12907 356 aa19.63■□□□□ 0.73
SSBP3-216ENST00000610401 TNFAIP8L2Q6P589 184 aaPredicted RBP19.63■□□□□ 0.73
SSBP3-216ENST00000610401 SLC46A3Q7Z3Q1 461 aa19.63■□□□□ 0.73
SSBP3-216ENST00000610401 C2orf49Q9BVC5 232 aaPredicted RBP19.63■□□□□ 0.73
SSBP3-216ENST00000610401 SPATA7Q9P0W8 599 aa19.63■□□□□ 0.73
SSBP3-216ENST00000610401 MUTYHQ9UIF7 546 aa19.63■□□□□ 0.73
SSBP3-216ENST00000610401 PCDHB11Q9Y5F2 797 aa19.63■□□□□ 0.73
SSBP3-216ENST00000610401 CNR2P34972 360 aa19.62■□□□□ 0.73
SSBP3-216ENST00000610401 ACLYP53396 1101 aa19.62■□□□□ 0.73
SSBP3-216ENST00000610401 PFN3P60673 137 aa19.62■□□□□ 0.73
SSBP3-216ENST00000610401 ARMC4Q5T2S8 1044 aa19.62■□□□□ 0.73
SSBP3-216ENST00000610401 THOC6Q86W42 341 aaKnown RBP19.62■□□□□ 0.73
SSBP3-216ENST00000610401 NUMA1Q14980 2115 aa19.62■□□□□ 0.73
SSBP3-216ENST00000610401 SCN10AQ9Y5Y9 1956 aa19.62■□□□□ 0.73
SSBP3-216ENST00000610401 KNL1Q8NG31 2342 aa19.62■□□□□ 0.73
SSBP3-216ENST00000610401 SLC16A8O95907 504 aa19.62■□□□□ 0.73
SSBP3-216ENST00000610401 GPX2P18283 190 aa19.62■□□□□ 0.73
SSBP3-216ENST00000610401 SERPINA4P29622 427 aa19.62■□□□□ 0.73
SSBP3-216ENST00000610401 PTGES3Q15185 160 aaKnown RBP19.62■□□□□ 0.73
SSBP3-216ENST00000610401 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.62■□□□□ 0.73
SSBP3-216ENST00000610401 MACC1Q6ZN28 852 aa19.62■□□□□ 0.73
SSBP3-216ENST00000610401 IQCF1Q8N6M8 205 aa19.62■□□□□ 0.73
SSBP3-216ENST00000610401 DTX3Q8N9I9 347 aa19.62■□□□□ 0.73
SSBP3-216ENST00000610401 SLC35A5Q9BS91 424 aa19.62■□□□□ 0.73
SSBP3-216ENST00000610401 DOHHQ9BU89 302 aa19.62■□□□□ 0.73
SSBP3-216ENST00000610401 B4GALT6Q9UBX8 382 aa19.62■□□□□ 0.73
SSBP3-216ENST00000610401 TMED5Q9Y3A6 229 aa19.62■□□□□ 0.73
SSBP3-216ENST00000610401 DOCK6Q96HP0 2047 aa19.61■□□□□ 0.73
SSBP3-216ENST00000610401 PRAMEF33A0A0G2JMD5 474 aa19.61■□□□□ 0.73
SSBP3-216ENST00000610401 CLDN24A6NM45 220 aa19.61■□□□□ 0.73
SSBP3-216ENST00000610401 PRAMEF10O60809 474 aa19.61■□□□□ 0.73
SSBP3-216ENST00000610401 DNAJB5O75953 348 aa19.61■□□□□ 0.73
SSBP3-216ENST00000610401 STATHP02808 62 aa19.61■□□□□ 0.73
SSBP3-216ENST00000610401 PDHA2P29803 388 aa19.61■□□□□ 0.73
SSBP3-216ENST00000610401 GGT2P36268 569 aa19.61■□□□□ 0.73
SSBP3-216ENST00000610401 CAV3P56539 151 aa19.61■□□□□ 0.73
SSBP3-216ENST00000610401 TRIM71Q2Q1W2 868 aaKnown RBP19.61■□□□□ 0.73
SSBP3-216ENST00000610401 VASH1Q7L8A9 365 aaPredicted RBP19.61■□□□□ 0.73
SSBP3-216ENST00000610401 DNAJB7Q7Z6W7 309 aaPredicted RBP19.61■□□□□ 0.73
SSBP3-216ENST00000610401 LAX1Q8IWV1 398 aa19.61■□□□□ 0.73
SSBP3-216ENST00000610401 HUS1BQ8NHY5 278 aa19.61■□□□□ 0.73
SSBP3-216ENST00000610401 RAB8BQ92930 207 aa19.61■□□□□ 0.73
SSBP3-216ENST00000610401 TESCQ96BS2 214 aa19.61■□□□□ 0.73
SSBP3-216ENST00000610401 CASD1Q96PB1 797 aa19.61■□□□□ 0.73
SSBP3-216ENST00000610401 SLC29A3Q9BZD2 475 aa19.61■□□□□ 0.73
SSBP3-216ENST00000610401 GBF1Q92538 1859 aa19.61■□□□□ 0.73
SSBP3-216ENST00000610401 EFCAB10A6NFE3 127 aa19.61■□□□□ 0.73
SSBP3-216ENST00000610401 ETV3P41162 512 aa19.61■□□□□ 0.73
SSBP3-216ENST00000610401 HNF4AP41235 474 aa19.61■□□□□ 0.73
SSBP3-216ENST00000610401 ALDH9A1P49189 494 aa19.61■□□□□ 0.73
SSBP3-216ENST00000610401 CSTF3Q12996 717 aaKnown RBP19.61■□□□□ 0.73
SSBP3-216ENST00000610401 CCDC85BQ15834 202 aaPredicted RBP19.61■□□□□ 0.73
SSBP3-216ENST00000610401 TCTN1Q2MV58 587 aa19.61■□□□□ 0.73
SSBP3-216ENST00000610401 SYTL3Q4VX76 610 aa19.61■□□□□ 0.73
SSBP3-216ENST00000610401 DPY19L3Q6ZPD9 716 aa19.61■□□□□ 0.73
SSBP3-216ENST00000610401 CAMKK1Q8N5S9 505 aa19.61■□□□□ 0.73
SSBP3-216ENST00000610401 C11orf65Q8NCR3 313 aa19.61■□□□□ 0.73
SSBP3-216ENST00000610401 IPCEF1Q8WWN9 437 aaPredicted RBP19.61■□□□□ 0.73
SSBP3-216ENST00000610401 EMILIN2Q9BXX0 1053 aa19.61■□□□□ 0.73
SSBP3-216ENST00000610401 ZDHHC3Q9NYG2 299 aa19.61■□□□□ 0.73
SSBP3-216ENST00000610401 TMPRSS11EQ9UL52 423 aa19.61■□□□□ 0.73
SSBP3-216ENST00000610401 CFAP20Q9Y6A4 193 aaKnown RBP19.61■□□□□ 0.73
SSBP3-216ENST00000610401 DYRK3O43781 588 aa19.6■□□□□ 0.73
SSBP3-216ENST00000610401 GUCY1B2O75343 617 aa19.6■□□□□ 0.73
SSBP3-216ENST00000610401 SNX4O95219 450 aa19.6■□□□□ 0.73
SSBP3-216ENST00000610401 SLC15A1P46059 708 aa19.6■□□□□ 0.73
SSBP3-216ENST00000610401 CXCR4P61073 352 aa19.6■□□□□ 0.73
SSBP3-216ENST00000610401 NPAS3Q8IXF0 933 aa19.6■□□□□ 0.73
SSBP3-216ENST00000610401 ZNF740Q8NDX6 193 aa19.6■□□□□ 0.73
SSBP3-216ENST00000610401 CSGALNACT1Q8TDX6 532 aa19.6■□□□□ 0.73
SSBP3-216ENST00000610401 ASB11Q8WXH4 323 aa19.6■□□□□ 0.73
SSBP3-216ENST00000610401 CTRCQ99895 268 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms