RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 ASB11Q8WXH4 323 aa16.24■□□□□ 0.19
CHMP4A-211ENST00000609024 MFSD3Q96ES6 412 aa16.24■□□□□ 0.19
CHMP4A-211ENST00000609024 SEC16BQ96JE7 1060 aa16.24■□□□□ 0.19
CHMP4A-211ENST00000609024 TRIM5Q9C035 493 aa16.24■□□□□ 0.19
CHMP4A-211ENST00000609024 DEFB127Q9H1M4 99 aa16.24■□□□□ 0.19
CHMP4A-211ENST00000609024 TRIM45Q9H8W5 580 aaPredicted RBP16.24■□□□□ 0.19
CHMP4A-211ENST00000609024 TIMMDC1Q9NPL8 285 aa16.24■□□□□ 0.19
CHMP4A-211ENST00000609024 EIF2B3Q9NR50 452 aaKnown RBP16.24■□□□□ 0.19
CHMP4A-211ENST00000609024 ERVK-11Q9UQG0 969 aa16.24■□□□□ 0.19
CHMP4A-211ENST00000609024 PABPN1LA6NDY0 278 aaKnown RBP16.23■□□□□ 0.19
CHMP4A-211ENST00000609024 NDUFS4O43181 175 aa16.23■□□□□ 0.19
CHMP4A-211ENST00000609024 KLK8O60259 260 aa16.23■□□□□ 0.19
CHMP4A-211ENST00000609024 MGAT1P26572 445 aa16.23■□□□□ 0.19
CHMP4A-211ENST00000609024 IMPA1P29218 277 aa16.23■□□□□ 0.19
CHMP4A-211ENST00000609024 NUP107P57740 925 aa16.23■□□□□ 0.19
CHMP4A-211ENST00000609024 GPR85P60893 370 aa16.23■□□□□ 0.19
CHMP4A-211ENST00000609024 CMPK2Q5EBM0 449 aa16.23■□□□□ 0.19
CHMP4A-211ENST00000609024 GSTA5Q7RTV2 222 aa16.23■□□□□ 0.19
CHMP4A-211ENST00000609024 SHISA5Q8N114 240 aa16.23■□□□□ 0.19
CHMP4A-211ENST00000609024 OR5T3Q8NGG3 340 aa16.23■□□□□ 0.19
CHMP4A-211ENST00000609024 GOT1L1Q8NHS2 421 aaPredicted RBP16.23■□□□□ 0.19
CHMP4A-211ENST00000609024 C16orf52Q8NHV5 167 aa16.23■□□□□ 0.19
CHMP4A-211ENST00000609024 C1orf54Q8WWF1 131 aa16.23■□□□□ 0.19
CHMP4A-211ENST00000609024 TM4SF19Q96DZ7 209 aa16.23■□□□□ 0.19
CHMP4A-211ENST00000609024 RMND5BQ96G75 393 aaPredicted RBP16.23■□□□□ 0.19
CHMP4A-211ENST00000609024 KIFC1Q9BW19 673 aa16.23■□□□□ 0.19
CHMP4A-211ENST00000609024 CXXC4Q9H2H0 198 aa16.23■□□□□ 0.19
CHMP4A-211ENST00000609024 LANCL2Q9NS86 450 aa16.23■□□□□ 0.19
CHMP4A-211ENST00000609024 INTS10Q9NVR2 710 aaKnown RBP16.23■□□□□ 0.19
CHMP4A-211ENST00000609024 FBXW2Q9UKT8 454 aa16.23■□□□□ 0.19
CHMP4A-211ENST00000609024 ANKHD1Q8IWZ3 2542 aaKnown RBP16.23■□□□□ 0.19
CHMP4A-211ENST00000609024 SAGE2PA6NJ88 616 aa16.22■□□□□ 0.19
CHMP4A-211ENST00000609024 TMEM200CA6NKL6 621 aa16.22■□□□□ 0.19
CHMP4A-211ENST00000609024 FIGNL2A6NMB9 653 aa16.22■□□□□ 0.19
CHMP4A-211ENST00000609024 A8MUA0 341 aa16.22■□□□□ 0.19
CHMP4A-211ENST00000609024 NPIPA2E9PIF3 369 aa16.22■□□□□ 0.19
CHMP4A-211ENST00000609024 NPIPA3F8WFD2 350 aa16.22■□□□□ 0.19
CHMP4A-211ENST00000609024 CHST10O43529 356 aa16.22■□□□□ 0.19
CHMP4A-211ENST00000609024 TUBB4AP04350 444 aa16.22■□□□□ 0.19
CHMP4A-211ENST00000609024 COILP38432 576 aaPredicted RBP16.22■□□□□ 0.19
CHMP4A-211ENST00000609024 SKIV2L2P42285 1042 aaKnown RBP16.22■□□□□ 0.19
CHMP4A-211ENST00000609024 CLCN2P51788 898 aa16.22■□□□□ 0.19
CHMP4A-211ENST00000609024 CLCN7P51798 805 aa16.22■□□□□ 0.19
CHMP4A-211ENST00000609024 DGKQP52824 942 aa16.22■□□□□ 0.19
CHMP4A-211ENST00000609024 RPS6KA1Q15418 735 aa16.22■□□□□ 0.19
CHMP4A-211ENST00000609024 DEFB134Q4QY38 66 aa16.22■□□□□ 0.19
CHMP4A-211ENST00000609024 ZNF585AQ6P3V2 769 aa16.22■□□□□ 0.19
CHMP4A-211ENST00000609024 CASC4Q6P4E1 433 aa16.22■□□□□ 0.19
CHMP4A-211ENST00000609024 C4orf22Q6V702 233 aa16.22■□□□□ 0.19
CHMP4A-211ENST00000609024 LRRC56Q8IYG6 542 aaPredicted RBP16.22■□□□□ 0.19
CHMP4A-211ENST00000609024 MFSD9Q8NBP5 474 aa16.22■□□□□ 0.19
CHMP4A-211ENST00000609024 OR52N2Q8NGI0 321 aa16.22■□□□□ 0.19
CHMP4A-211ENST00000609024 CREB3L4Q8TEY5 395 aa16.22■□□□□ 0.19
CHMP4A-211ENST00000609024 CCDC77Q9BR77 488 aa16.22■□□□□ 0.19
CHMP4A-211ENST00000609024 LACRTQ9GZZ8 138 aa16.22■□□□□ 0.19
CHMP4A-211ENST00000609024 TSPY26PQ9H489 355 aa16.22■□□□□ 0.19
CHMP4A-211ENST00000609024 SYBUQ9NX95 663 aa16.22■□□□□ 0.19
CHMP4A-211ENST00000609024 KLHL42Q9P2K6 505 aa16.22■□□□□ 0.19
CHMP4A-211ENST00000609024 ST6GALNAC2Q9UJ37 374 aa16.22■□□□□ 0.19
CHMP4A-211ENST00000609024 HRH3Q9Y5N1 445 aa16.22■□□□□ 0.19
CHMP4A-211ENST00000609024 A0A1B0GTL3 188 aa16.21■□□□□ 0.19
CHMP4A-211ENST00000609024 GFYI3L273 518 aa16.21■□□□□ 0.19
CHMP4A-211ENST00000609024 ZSCAN5DPP0CG00 497 aa16.21■□□□□ 0.19
CHMP4A-211ENST00000609024 ALOX12P18054 663 aa16.21■□□□□ 0.19
CHMP4A-211ENST00000609024 CCND1P24385 295 aa16.21■□□□□ 0.19
CHMP4A-211ENST00000609024 ARNTP27540 789 aa16.21■□□□□ 0.19
CHMP4A-211ENST00000609024 RPL22P35268 128 aaKnown RBP16.21■□□□□ 0.19
CHMP4A-211ENST00000609024 ZFP36L2P47974 494 aaKnown RBP16.21■□□□□ 0.19
CHMP4A-211ENST00000609024 PPIAP62937 165 aaKnown RBP16.21■□□□□ 0.19
CHMP4A-211ENST00000609024 OLR1P78380 273 aa16.21■□□□□ 0.19
CHMP4A-211ENST00000609024 RGS1Q08116 209 aa16.21■□□□□ 0.19
CHMP4A-211ENST00000609024 KIF5AQ12840 1032 aa16.21■□□□□ 0.19
CHMP4A-211ENST00000609024 THOC5Q13769 683 aaKnown RBP16.21■□□□□ 0.19
CHMP4A-211ENST00000609024 KIAA0930Q6ICG6 404 aaPredicted RBP16.21■□□□□ 0.19
CHMP4A-211ENST00000609024 NEPROQ6NW34 567 aa16.21■□□□□ 0.19
CHMP4A-211ENST00000609024 ABHD13Q7L211 337 aa16.21■□□□□ 0.19
CHMP4A-211ENST00000609024 ZNF227Q86WZ6 799 aa16.21■□□□□ 0.19
CHMP4A-211ENST00000609024 CILP2Q8IUL8 1156 aa16.21■□□□□ 0.19
CHMP4A-211ENST00000609024 ZZZ3Q8IYH5 903 aa16.21■□□□□ 0.19
CHMP4A-211ENST00000609024 ZFP62Q8NB50 900 aaPredicted RBP16.21■□□□□ 0.19
CHMP4A-211ENST00000609024 CCDC138Q96M89 665 aa16.21■□□□□ 0.19
CHMP4A-211ENST00000609024 SAMD15Q9P1V8 674 aa16.21■□□□□ 0.19
CHMP4A-211ENST00000609024 SOX13Q9UN79 622 aa16.21■□□□□ 0.19
CHMP4A-211ENST00000609024 MAP1AP78559 2803 aaPredicted RBP16.21■□□□□ 0.19
CHMP4A-211ENST00000609024 TRBV11-1A0A0K0K1C0 115 aa16.2■□□□□ 0.18
CHMP4A-211ENST00000609024 OR1F1O43749 312 aa16.2■□□□□ 0.18
CHMP4A-211ENST00000609024 CEP104O60308 925 aa16.2■□□□□ 0.18
CHMP4A-211ENST00000609024 GALR3O60755 368 aaPredicted RBP16.2■□□□□ 0.18
CHMP4A-211ENST00000609024 AVILO75366 819 aa16.2■□□□□ 0.18
CHMP4A-211ENST00000609024 HIST1H2AGP0C0S8 130 aaPredicted RBP16.2■□□□□ 0.18
CHMP4A-211ENST00000609024 CDH1P12830 882 aa16.2■□□□□ 0.18
CHMP4A-211ENST00000609024 FOSL1P15407 271 aa16.2■□□□□ 0.18
CHMP4A-211ENST00000609024 HIST1H2ADP20671 130 aa16.2■□□□□ 0.18
CHMP4A-211ENST00000609024 PTMSP20962 102 aa16.2■□□□□ 0.18
CHMP4A-211ENST00000609024 ACVR2AP27037 513 aa16.2■□□□□ 0.18
CHMP4A-211ENST00000609024 SSR4P51571 173 aa16.2■□□□□ 0.18
CHMP4A-211ENST00000609024 SARNPP82979 210 aaKnown RBP16.2■□□□□ 0.18
CHMP4A-211ENST00000609024 FOXD4Q12950 439 aaPredicted RBP16.2■□□□□ 0.18
CHMP4A-211ENST00000609024 GXYLT1Q4G148 440 aa16.2■□□□□ 0.18
CHMP4A-211ENST00000609024 ZNF470Q6ECI4 717 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms