RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 ALX3O95076 343 aa21.52■■□□□ 1.03
SHANK2-220ENST00000608988 GJB5O95377 273 aa21.52■■□□□ 1.03
SHANK2-220ENST00000608988 CLDN7O95471 211 aa21.52■■□□□ 1.03
SHANK2-220ENST00000608988 SRPRAP08240 638 aaKnown RBP21.52■■□□□ 1.03
SHANK2-220ENST00000608988 HNF1BP35680 557 aa21.52■■□□□ 1.03
SHANK2-220ENST00000608988 LIMS1P48059 325 aa21.52■■□□□ 1.03
SHANK2-220ENST00000608988 RORCP51449 518 aa21.52■■□□□ 1.03
SHANK2-220ENST00000608988 DUSP4Q13115 394 aa21.52■■□□□ 1.03
SHANK2-220ENST00000608988 CHIT1Q13231 466 aa21.52■■□□□ 1.03
SHANK2-220ENST00000608988 CAMK2BQ13554 666 aa21.52■■□□□ 1.03
SHANK2-220ENST00000608988 DMC1Q14565 340 aa21.52■■□□□ 1.03
SHANK2-220ENST00000608988 PLEKHS1Q5SXH7 462 aa21.52■■□□□ 1.03
SHANK2-220ENST00000608988 RNLSQ5VYX0 342 aa21.52■■□□□ 1.03
SHANK2-220ENST00000608988 TMPRSS11AQ6ZMR5 421 aa21.52■■□□□ 1.03
SHANK2-220ENST00000608988 GALNT12Q8IXK2 581 aa21.52■■□□□ 1.03
SHANK2-220ENST00000608988 ADGRG2Q8IZP9 1017 aa21.52■■□□□ 1.03
SHANK2-220ENST00000608988 DCAF4L2Q8NA75 395 aa21.52■■□□□ 1.03
SHANK2-220ENST00000608988 GOT1L1Q8NHS2 421 aaPredicted RBP21.52■■□□□ 1.03
SHANK2-220ENST00000608988 WDR20Q8TBZ3 569 aa21.52■■□□□ 1.03
SHANK2-220ENST00000608988 GEMIN6Q8WXD5 167 aaKnown RBP21.52■■□□□ 1.03
SHANK2-220ENST00000608988 COPS8Q99627 209 aa21.52■■□□□ 1.03
SHANK2-220ENST00000608988 KCNS3Q9BQ31 491 aa21.52■■□□□ 1.03
SHANK2-220ENST00000608988 TMEM245Q9H330 911 aa21.52■■□□□ 1.03
SHANK2-220ENST00000608988 ITM2CQ9NQX7 267 aa21.52■■□□□ 1.03
SHANK2-220ENST00000608988 TMEM184CQ9NVA4 438 aa21.52■■□□□ 1.03
SHANK2-220ENST00000608988 ERVK13-1Q9NX77 482 aa21.52■■□□□ 1.03
SHANK2-220ENST00000608988 FCF1Q9Y324 198 aaKnown RBP21.52■■□□□ 1.03
SHANK2-220ENST00000608988 IGLV3-16A0A075B6K0 115 aa21.51■■□□□ 1.03
SHANK2-220ENST00000608988 ZAR1LA6NP61 321 aa21.51■■□□□ 1.03
SHANK2-220ENST00000608988 GFYI3L273 518 aa21.51■■□□□ 1.03
SHANK2-220ENST00000608988 NUDT7P0C024 238 aa21.51■■□□□ 1.03
SHANK2-220ENST00000608988 CCR7P32248 378 aa21.51■■□□□ 1.03
SHANK2-220ENST00000608988 CDH12P55289 794 aa21.51■■□□□ 1.03
SHANK2-220ENST00000608988 BNC1Q01954 994 aa21.51■■□□□ 1.03
SHANK2-220ENST00000608988 ASAH1Q13510 395 aa21.51■■□□□ 1.03
SHANK2-220ENST00000608988 MED22Q15528 200 aa21.51■■□□□ 1.03
SHANK2-220ENST00000608988 TRIM71Q2Q1W2 868 aaKnown RBP21.51■■□□□ 1.03
SHANK2-220ENST00000608988 ZXDCQ2QGD7 858 aaPredicted RBP21.51■■□□□ 1.03
SHANK2-220ENST00000608988 OR7G1Q8NGA0 311 aa21.51■■□□□ 1.03
SHANK2-220ENST00000608988 MCCC1Q96RQ3 725 aaPredicted RBP21.51■■□□□ 1.03
SHANK2-220ENST00000608988 PIP5K1AQ99755 562 aa21.51■■□□□ 1.03
SHANK2-220ENST00000608988 NIPSNAP1Q9BPW8 284 aa21.51■■□□□ 1.03
SHANK2-220ENST00000608988 TSEN34Q9BSV6 310 aaKnown RBP21.51■■□□□ 1.03
SHANK2-220ENST00000608988 ASPNQ9BXN1 380 aa21.51■■□□□ 1.03
SHANK2-220ENST00000608988 C14orf119Q9NWQ9 140 aa21.51■■□□□ 1.03
SHANK2-220ENST00000608988 TBC1D14Q9P2M4 693 aa21.51■■□□□ 1.03
SHANK2-220ENST00000608988 ZNF451Q9Y4E5 1061 aa21.51■■□□□ 1.03
SHANK2-220ENST00000608988 V9GYH0 126 aa21.51■■□□□ 1.03
SHANK2-220ENST00000608988 IQCMA0A1B0GVH7 501 aa21.5■■□□□ 1.03
SHANK2-220ENST00000608988 TNFRSF10AO00220 468 aa21.5■■□□□ 1.03
SHANK2-220ENST00000608988 KPNA5O15131 536 aa21.5■■□□□ 1.03
SHANK2-220ENST00000608988 GUCY1B2O75343 617 aa21.5■■□□□ 1.03
SHANK2-220ENST00000608988 GPX5O75715 221 aa21.5■■□□□ 1.03
SHANK2-220ENST00000608988 HLA-EP13747 358 aa21.5■■□□□ 1.03
SHANK2-220ENST00000608988 CBLP22681 906 aa21.5■■□□□ 1.03
SHANK2-220ENST00000608988 CSTF2P33240 577 aaKnown RBP eCLIP21.5■■□□□ 1.031e-6■■■□□ 16.9
SHANK2-220ENST00000608988 RFX2P48378 723 aa21.5■■□□□ 1.03
SHANK2-220ENST00000608988 SCN1BQ07699 218 aa21.5■■□□□ 1.03
SHANK2-220ENST00000608988 ELAVL2Q12926 359 aaKnown RBP21.5■■□□□ 1.03
SHANK2-220ENST00000608988 SSX1Q16384 188 aa21.5■■□□□ 1.03
SHANK2-220ENST00000608988 GCNT6Q5T4J0 391 aa21.5■■□□□ 1.03
SHANK2-220ENST00000608988 METTL3Q86U44 580 aaKnown RBP21.5■■□□□ 1.03
SHANK2-220ENST00000608988 SLC30A8Q8IWU4 369 aa21.5■■□□□ 1.03
SHANK2-220ENST00000608988 OR5M11Q96RB7 305 aa21.5■■□□□ 1.03
SHANK2-220ENST00000608988 GDF15Q99988 308 aa21.5■■□□□ 1.03
SHANK2-220ENST00000608988 SLC22A4Q9H015 551 aa21.5■■□□□ 1.03
SHANK2-220ENST00000608988 TMEM38AQ9H6F2 299 aa21.5■■□□□ 1.03
SHANK2-220ENST00000608988 FZD3Q9NPG1 666 aa21.5■■□□□ 1.03
SHANK2-220ENST00000608988 RLIMQ9NVW2 624 aa21.5■■□□□ 1.03
SHANK2-220ENST00000608988 FTSJ1Q9UET6 329 aa21.5■■□□□ 1.03
SHANK2-220ENST00000608988 YY2O15391 372 aa21.49■■□□□ 1.03
SHANK2-220ENST00000608988 SSX4O60224 188 aa21.49■■□□□ 1.03
SHANK2-220ENST00000608988 PRAMEF4O60810 478 aa21.49■■□□□ 1.03
SHANK2-220ENST00000608988 TNFRSF21O75509 655 aa21.49■■□□□ 1.03
SHANK2-220ENST00000608988 YES1P07947 543 aa21.49■■□□□ 1.03
SHANK2-220ENST00000608988 MZF1P28698 734 aaPredicted RBP21.49■■□□□ 1.03
SHANK2-220ENST00000608988 SNRPGP62308 76 aaKnown RBP21.49■■□□□ 1.03
SHANK2-220ENST00000608988 IRF8Q02556 426 aa21.49■■□□□ 1.03
SHANK2-220ENST00000608988 PRAMEF9Q5VWM5 478 aa21.49■■□□□ 1.03
SHANK2-220ENST00000608988 ZDHHC20Q5W0Z9 365 aa21.49■■□□□ 1.03
SHANK2-220ENST00000608988 RTN4RL1Q86UN2 441 aaPredicted RBP21.49■■□□□ 1.03
SHANK2-220ENST00000608988 KLHDC8AQ8IYD2 350 aa21.49■■□□□ 1.03
SHANK2-220ENST00000608988 TRPV1Q8NER1 839 aa21.49■■□□□ 1.03
SHANK2-220ENST00000608988 WDR36Q8NI36 951 aaKnown RBP21.49■■□□□ 1.03
SHANK2-220ENST00000608988 OPALINQ96PE5 141 aa21.49■■□□□ 1.03
SHANK2-220ENST00000608988 BHLHE41Q9C0J9 482 aaPredicted RBP21.49■■□□□ 1.03
SHANK2-220ENST00000608988 SLC22A14Q9Y267 594 aa21.49■■□□□ 1.03
SHANK2-220ENST00000608988 DOCK3Q8IZD9 2030 aa21.49■■□□□ 1.03
SHANK2-220ENST00000608988 MEIOCA2RUB1 952 aa21.49■■□□□ 1.03
SHANK2-220ENST00000608988 H0YIV9 168 aa21.49■■□□□ 1.03
SHANK2-220ENST00000608988 SEC14L5O43304 696 aa21.49■■□□□ 1.03
SHANK2-220ENST00000608988 XCR1P46094 333 aa21.49■■□□□ 1.03
SHANK2-220ENST00000608988 ARPC4P59998 168 aa21.49■■□□□ 1.03
SHANK2-220ENST00000608988 CYP4F2P78329 520 aa21.49■■□□□ 1.03
SHANK2-220ENST00000608988 RUNX1T1Q06455 604 aa21.49■■□□□ 1.03
SHANK2-220ENST00000608988 DMPKQ09013 629 aa21.49■■□□□ 1.03
SHANK2-220ENST00000608988 NXNL2Q5VZ03 156 aa21.49■■□□□ 1.03
SHANK2-220ENST00000608988 RETSATQ6NUM9 610 aa21.49■■□□□ 1.03
SHANK2-220ENST00000608988 PTCHD4Q6ZW05 846 aa21.49■■□□□ 1.03
SHANK2-220ENST00000608988 NAGSQ8N159 534 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms