RNA–Protein interactions for RNA: ENST00000603451.1

SQSTM1P1-201, Transcript of sequestosome 1 pseudogene 1, humanhuman

BASIC

Gene SQSTM1P1, Length 859 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1P1-201ENST00000603451 TMEM120BA0PK00 339 aa9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 BLACEA4D250 179 aa9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 LRIT2A6NDA9 550 aa9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 LRRC14BA6NHZ5 514 aa9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 TMEM114B3SHH9 223 aa9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 P2RX6O15547 441 aa9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 SCELO95171 688 aa9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 NTRK1P04629 796 aa9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 PTX3P26022 381 aaPredicted RBP9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 ARL1P40616 181 aaPredicted RBP9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 SERPINB4P48594 390 aa9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 TMPRSS3P57727 454 aa9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 MAGOHP61326 146 aaKnown RBP9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 IFT88Q13099 833 aa9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 DNASE1L3Q13609 305 aa9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 RCN2Q14257 317 aa9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 NCF4Q15080 339 aa9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 KHDRBS2Q5VWX1 349 aaKnown RBP9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 MRPL14Q6P1L8 145 aaKnown RBP9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 FAM198BQ6UWH4 519 aa9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 SYVN1Q86TM6 617 aa9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 MYLK4Q86YV6 388 aaPredicted RBP9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 TRIM42Q8IWZ5 723 aa9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 CCNYL1Q8N7R7 359 aa9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 ZSCAN1Q8NBB4 408 aa9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 OR4F6Q8NGB9 312 aa9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 OR6Y1Q8NGX8 325 aa9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 HUS1BQ8NHY5 278 aa9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 WDR20Q8TBZ3 569 aa9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 AGAP11Q8TF27 550 aa9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 MR1Q95460 341 aa9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 METTL2AQ96IZ6 378 aaKnown RBP9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 VPS50Q96JG6 964 aa9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 NSUN5Q96P11 429 aaKnown RBP9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 IP6K3Q96PC2 410 aa9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 KCNC2Q96PR1 638 aa9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 OR1F2PQ96R84 312 aa9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 CCT7Q99832 543 aa9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 TBCDQ9BTW9 1192 aa9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 NPLQ9BXD5 320 aaPredicted RBP9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 MS4A8Q9BY19 250 aa9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 REXO4Q9GZR2 422 aaKnown RBP9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 ELOVL6Q9H5J4 265 aa9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 SYNPO2LQ9H987 977 aa9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 GPN2Q9H9Y4 310 aaPredicted RBP9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 MKKSQ9NPJ1 570 aaPredicted RBP9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 MED4Q9NPJ6 270 aa9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 DMRT3Q9NQL9 472 aa9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 IFT80Q9P2H3 777 aaPredicted RBP9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 DHCR7Q9UBM7 475 aaKnown RBP9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 ZNF282Q9UDV7 671 aaPredicted RBP9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 NDOR1Q9UHB4 597 aa9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 GPN3Q9UHW5 284 aaPredicted RBP9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 ZNF490Q9ULM2 529 aaPredicted RBP9.01□□□□□ -0.97
SQSTM1P1-201ENST00000603451 ZNF891A8MT65 544 aaPredicted RBP9□□□□□ -0.97
SQSTM1P1-201ENST00000603451 AGRPO00253 132 aa9□□□□□ -0.97
SQSTM1P1-201ENST00000603451 KLK10O43240 276 aa9□□□□□ -0.97
SQSTM1P1-201ENST00000603451 GALR3O60755 368 aaPredicted RBP9□□□□□ -0.97
SQSTM1P1-201ENST00000603451 CHEK2O96017 543 aa9□□□□□ -0.97
SQSTM1P1-201ENST00000603451 SERPINE1P05121 402 aa9□□□□□ -0.97
SQSTM1P1-201ENST00000603451 SMIM10L1P0DMW3 83 aa9□□□□□ -0.97
SQSTM1P1-201ENST00000603451 UROSP10746 265 aa9□□□□□ -0.97
SQSTM1P1-201ENST00000603451 CREB1P16220 341 aa9□□□□□ -0.97
SQSTM1P1-201ENST00000603451 TCN2P20062 427 aa9□□□□□ -0.97
SQSTM1P1-201ENST00000603451 FBLP22087 321 aaKnown RBP9□□□□□ -0.97
SQSTM1P1-201ENST00000603451 ALAS2P22557 587 aa9□□□□□ -0.97
SQSTM1P1-201ENST00000603451 PTPN4P29074 926 aa9□□□□□ -0.97
SQSTM1P1-201ENST00000603451 HMOX2P30519 316 aa9□□□□□ -0.97
SQSTM1P1-201ENST00000603451 ALDH3A1P30838 453 aa9□□□□□ -0.97
SQSTM1P1-201ENST00000603451 DLSTP36957 453 aa9□□□□□ -0.97
SQSTM1P1-201ENST00000603451 OCA2Q04671 838 aa9□□□□□ -0.97
SQSTM1P1-201ENST00000603451 TLE3Q04726 772 aa9□□□□□ -0.97
SQSTM1P1-201ENST00000603451 HYAL2Q12891 473 aa9□□□□□ -0.97
SQSTM1P1-201ENST00000603451 ZRSR2Q15696 482 aaKnown RBP9□□□□□ -0.97
SQSTM1P1-201ENST00000603451 CPSF6Q16630 551 aaKnown RBP eCLIP9□□□□□ -0.97
SQSTM1P1-201ENST00000603451 DEPDC1Q5TB30 811 aa9□□□□□ -0.97
SQSTM1P1-201ENST00000603451 ARHGAP40Q5TG30 622 aa9□□□□□ -0.97
SQSTM1P1-201ENST00000603451 TTC19Q6DKK2 380 aaPredicted RBP9□□□□□ -0.97
SQSTM1P1-201ENST00000603451 LETMD1Q6P1Q0 360 aa9□□□□□ -0.97
SQSTM1P1-201ENST00000603451 OVCH1Q7RTY7 1134 aa9□□□□□ -0.97
SQSTM1P1-201ENST00000603451 VN1R5Q7Z5H4 357 aa9□□□□□ -0.97
SQSTM1P1-201ENST00000603451 NUDCD3Q8IVD9 361 aa9□□□□□ -0.97
SQSTM1P1-201ENST00000603451 C10orf107Q8IVU9 208 aa9□□□□□ -0.97
SQSTM1P1-201ENST00000603451 SPACA3Q8IXA5 215 aa9□□□□□ -0.97
SQSTM1P1-201ENST00000603451 KCT2Q8NC54 265 aa9□□□□□ -0.97
SQSTM1P1-201ENST00000603451 OR2Y1Q8NGV0 311 aa9□□□□□ -0.97
SQSTM1P1-201ENST00000603451 UTP15Q8TED0 518 aaKnown RBP9□□□□□ -0.97
SQSTM1P1-201ENST00000603451 TRPC4APQ8TEL6 797 aa9□□□□□ -0.97
SQSTM1P1-201ENST00000603451 CT55Q8WUE5 264 aa9□□□□□ -0.97
SQSTM1P1-201ENST00000603451 MS4A6EQ96DS6 147 aa9□□□□□ -0.97
SQSTM1P1-201ENST00000603451 SMIM10Q96HG1 83 aa9□□□□□ -0.97
SQSTM1P1-201ENST00000603451 FAR2Q96K12 515 aa9□□□□□ -0.97
SQSTM1P1-201ENST00000603451 SERPINI1Q99574 410 aa9□□□□□ -0.97
SQSTM1P1-201ENST00000603451 CHST8Q9H2A9 424 aa9□□□□□ -0.97
SQSTM1P1-201ENST00000603451 COPS7BQ9H9Q2 264 aaPredicted RBP9□□□□□ -0.97
SQSTM1P1-201ENST00000603451 KCNK9Q9NPC2 374 aa9□□□□□ -0.97
SQSTM1P1-201ENST00000603451 PFDN4Q9NQP4 134 aa9□□□□□ -0.97
SQSTM1P1-201ENST00000603451 PRDM9Q9NQV7 894 aa9□□□□□ -0.97
SQSTM1P1-201ENST00000603451 ADAM29Q9UKF5 820 aa9□□□□□ -0.97
SQSTM1P1-201ENST00000603451 CROTQ9UKG9 612 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms