RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-231ENST00000602190 TFECO14948 347 aaPredicted RBP17.09■□□□□ 0.33
IRF3-231ENST00000602190 PFDN6O15212 129 aa17.09■□□□□ 0.33
IRF3-231ENST00000602190 HS6ST1O60243 411 aa17.09■□□□□ 0.33
IRF3-231ENST00000602190 DNAJB6O75190 326 aa17.09■□□□□ 0.33
IRF3-231ENST00000602190 CDC123O75794 336 aaPredicted RBP17.09■□□□□ 0.33
IRF3-231ENST00000602190 NADKO95544 446 aaPredicted RBP17.09■□□□□ 0.33
IRF3-231ENST00000602190 KLK2P20151 261 aa17.09■□□□□ 0.33
IRF3-231ENST00000602190 MGAT1P26572 445 aa17.09■□□□□ 0.33
IRF3-231ENST00000602190 CDK16Q00536 496 aa17.09■□□□□ 0.33
IRF3-231ENST00000602190 ACTN3Q08043 901 aaPredicted RBP17.09■□□□□ 0.33
IRF3-231ENST00000602190 HERC3Q15034 1050 aa17.09■□□□□ 0.33
IRF3-231ENST00000602190 MEI1Q5TIA1 1274 aa17.09■□□□□ 0.33
IRF3-231ENST00000602190 CES4AQ5XG92 561 aa17.09■□□□□ 0.33
IRF3-231ENST00000602190 CAPN13Q6MZZ7 669 aaPredicted RBP17.09■□□□□ 0.33
IRF3-231ENST00000602190 CES3Q6UWW8 571 aa17.09■□□□□ 0.33
IRF3-231ENST00000602190 MFSD9Q8NBP5 474 aa17.09■□□□□ 0.33
IRF3-231ENST00000602190 ACRBPQ8NEB7 543 aa17.09■□□□□ 0.33
IRF3-231ENST00000602190 ABHD11Q8NFV4 315 aa17.09■□□□□ 0.33
IRF3-231ENST00000602190 OR4K1Q8NGD4 311 aa17.09■□□□□ 0.33
IRF3-231ENST00000602190 CD200R1Q8TD46 325 aa17.09■□□□□ 0.33
IRF3-231ENST00000602190 C1orf54Q8WWF1 131 aa17.09■□□□□ 0.33
IRF3-231ENST00000602190 SLC13A3Q8WWT9 602 aa17.09■□□□□ 0.33
IRF3-231ENST00000602190 RBCK1Q9BYM8 510 aa17.09■□□□□ 0.33
IRF3-231ENST00000602190 ZDHHC11Q9H8X9 412 aa17.09■□□□□ 0.33
IRF3-231ENST00000602190 CLK4Q9HAZ1 481 aaKnown RBP17.09■□□□□ 0.33
IRF3-231ENST00000602190 ZNF358Q9NW07 568 aa17.09■□□□□ 0.33
IRF3-231ENST00000602190 VPS9D1Q9Y2B5 631 aa17.09■□□□□ 0.33
IRF3-231ENST00000602190 L3MBTL1Q9Y468 752 aa17.09■□□□□ 0.33
IRF3-231ENST00000602190 FAM90A27PA6NNH2 459 aa17.08■□□□□ 0.32
IRF3-231ENST00000602190 E5RI56 91 aa17.08■□□□□ 0.32
IRF3-231ENST00000602190 ZBTB14O43829 449 aa17.08■□□□□ 0.32
IRF3-231ENST00000602190 PEX1O43933 1283 aa17.08■□□□□ 0.32
IRF3-231ENST00000602190 CTAG2O75638 210 aa17.08■□□□□ 0.32
IRF3-231ENST00000602190 NR0B1P51843 470 aaKnown RBP17.08■□□□□ 0.32
IRF3-231ENST00000602190 NUP107P57740 925 aa17.08■□□□□ 0.32
IRF3-231ENST00000602190 CUL1Q13616 776 aa17.08■□□□□ 0.32
IRF3-231ENST00000602190 C4orf22Q6V702 233 aa17.08■□□□□ 0.32
IRF3-231ENST00000602190 STRA8Q7Z7C7 330 aa17.08■□□□□ 0.32
IRF3-231ENST00000602190 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.08■□□□□ 0.32
IRF3-231ENST00000602190 ZNF740Q8NDX6 193 aa17.08■□□□□ 0.32
IRF3-231ENST00000602190 CHDHQ8NE62 594 aaPredicted RBP17.08■□□□□ 0.32
IRF3-231ENST00000602190 OR52N2Q8NGI0 321 aa17.08■□□□□ 0.32
IRF3-231ENST00000602190 TMEM125Q96AQ2 219 aa17.08■□□□□ 0.32
IRF3-231ENST00000602190 CAPN6Q9Y6Q1 641 aa17.08■□□□□ 0.32
IRF3-231ENST00000602190 VPS13CQ709C8 3753 aa17.08■□□□□ 0.32
IRF3-231ENST00000602190 ZNF860A6NHJ4 632 aa17.07■□□□□ 0.32
IRF3-231ENST00000602190 CHST10O43529 356 aa17.07■□□□□ 0.32
IRF3-231ENST00000602190 SLC35G6P0C7Q6 338 aa17.07■□□□□ 0.32
IRF3-231ENST00000602190 FOSL1P15407 271 aa17.07■□□□□ 0.32
IRF3-231ENST00000602190 TPSB2P20231 275 aa17.07■□□□□ 0.32
IRF3-231ENST00000602190 JAK1P23458 1154 aa17.07■□□□□ 0.32
IRF3-231ENST00000602190 MAGEA6P43360 314 aa17.07■□□□□ 0.32
IRF3-231ENST00000602190 GPR143P51810 404 aa17.07■□□□□ 0.32
IRF3-231ENST00000602190 DLX5P56178 289 aa17.07■□□□□ 0.32
IRF3-231ENST00000602190 PWP1Q13610 501 aa17.07■□□□□ 0.32
IRF3-231ENST00000602190 TERF2Q15554 542 aa17.07■□□□□ 0.32
IRF3-231ENST00000602190 TPSAB1Q15661 275 aa17.07■□□□□ 0.32
IRF3-231ENST00000602190 THEMIS2Q5TEJ8 643 aa17.07■□□□□ 0.32
IRF3-231ENST00000602190 NIPAL1Q6NVV3 410 aa17.07■□□□□ 0.32
IRF3-231ENST00000602190 NEPROQ6NW34 567 aa17.07■□□□□ 0.32
IRF3-231ENST00000602190 LCTLQ6UWM7 567 aa17.07■□□□□ 0.32
IRF3-231ENST00000602190 ACAD11Q709F0 780 aa17.07■□□□□ 0.32
IRF3-231ENST00000602190 TMEM200AQ86VY9 491 aa17.07■□□□□ 0.32
IRF3-231ENST00000602190 CCDC71Q8IV32 467 aaPredicted RBP17.07■□□□□ 0.32
IRF3-231ENST00000602190 CCDC89Q8N998 374 aa17.07■□□□□ 0.32
IRF3-231ENST00000602190 DEPPQ9NTK1 212 aa17.07■□□□□ 0.32
IRF3-231ENST00000602190 ZNF223Q9UK11 482 aaPredicted RBP17.07■□□□□ 0.32
IRF3-231ENST00000602190 CLDN16Q9Y5I7 305 aa17.07■□□□□ 0.32
IRF3-231ENST00000602190 ARHGAP21Q5T5U3 1957 aa17.06■□□□□ 0.32
IRF3-231ENST00000602190 EML6Q6ZMW3 1958 aa17.06■□□□□ 0.32
IRF3-231ENST00000602190 FCHO1O14526 889 aa17.06■□□□□ 0.32
IRF3-231ENST00000602190 PRMT3O60678 531 aa17.06■□□□□ 0.32
IRF3-231ENST00000602190 IPO7O95373 1038 aaKnown RBP17.06■□□□□ 0.32
IRF3-231ENST00000602190 SYF2O95926 243 aaKnown RBP17.06■□□□□ 0.32
IRF3-231ENST00000602190 NPPBP16860 134 aa17.06■□□□□ 0.32
IRF3-231ENST00000602190 ALOX12P18054 663 aa17.06■□□□□ 0.32
IRF3-231ENST00000602190 RFC3P40938 356 aa17.06■□□□□ 0.32
IRF3-231ENST00000602190 CCNG2Q16589 344 aa17.06■□□□□ 0.32
IRF3-231ENST00000602190 PIWIL4Q7Z3Z4 852 aaKnown RBP17.06■□□□□ 0.32
IRF3-231ENST00000602190 MDGA2Q7Z553 956 aa17.06■□□□□ 0.32
IRF3-231ENST00000602190 C17orf64Q86WR6 236 aa17.06■□□□□ 0.32
IRF3-231ENST00000602190 OTUD6BQ8N6M0 293 aa17.06■□□□□ 0.32
IRF3-231ENST00000602190 NT5CQ8TCD5 201 aa17.06■□□□□ 0.32
IRF3-231ENST00000602190 CCM2LQ9NUG4 571 aaPredicted RBP17.06■□□□□ 0.32
IRF3-231ENST00000602190 ST6GALNAC2Q9UJ37 374 aa17.06■□□□□ 0.32
IRF3-231ENST00000602190 PDE10AQ9Y233 779 aa17.06■□□□□ 0.32
IRF3-231ENST00000602190 FAM215AQ9Y5M1 114 aa17.06■□□□□ 0.32
IRF3-231ENST00000602190 ZCWPW2A0A1B0GU75 182 aa17.05■□□□□ 0.32
IRF3-231ENST00000602190 TCRBV7S3A2A0A539 114 aa17.05■□□□□ 0.32
IRF3-231ENST00000602190 IGHG3P01860 377 aa17.05■□□□□ 0.32
IRF3-231ENST00000602190 SMIM10L1P0DMW3 83 aa17.05■□□□□ 0.32
IRF3-231ENST00000602190 CCND1P24385 295 aa17.05■□□□□ 0.32
IRF3-231ENST00000602190 BTG2P78543 158 aa17.05■□□□□ 0.32
IRF3-231ENST00000602190 TIAL1Q01085 375 aaKnown RBP eCLIP17.05■□□□□ 0.32
IRF3-231ENST00000602190 FOXD4Q12950 439 aaPredicted RBP17.05■□□□□ 0.32
IRF3-231ENST00000602190 AGTRAPQ6RW13 159 aa17.05■□□□□ 0.32
IRF3-231ENST00000602190 UBE2R2Q712K3 238 aaPredicted RBP17.05■□□□□ 0.32
IRF3-231ENST00000602190 TMEM139Q8IV31 216 aa17.05■□□□□ 0.32
IRF3-231ENST00000602190 CLYBLQ8N0X4 340 aa17.05■□□□□ 0.32
IRF3-231ENST00000602190 CYP4Z2PQ8N1L4 340 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms